RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 M0R2N4 97 aa6.67□□□□□ -1.34
APOC1-201ENST00000586638 Q1RN00 199 aa6.67□□□□□ -1.34
APOC1-201ENST00000586638 PPDPFQ9H3Y8 114 aa6.67□□□□□ -1.34
APOC1-201ENST00000586638 SND1-IT1Q9HBX3 110 aa6.67□□□□□ -1.34
APOC1-201ENST00000586638 PSCAO43653 123 aa6.66□□□□□ -1.34
APOC1-201ENST00000586638 SYCNQ0VAF6 134 aa6.66□□□□□ -1.34
APOC1-201ENST00000586638 COX17Q14061 63 aa6.66□□□□□ -1.34
APOC1-201ENST00000586638 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
APOC1-201ENST00000586638 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.34
APOC1-201ENST00000586638 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
APOC1-201ENST00000586638 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
APOC1-201ENST00000586638 FABP2P12104 132 aa6.65□□□□□ -1.34
APOC1-201ENST00000586638 Q8NDZ9 215 aa6.65□□□□□ -1.34
APOC1-201ENST00000586638 F8WDY8 70 aa6.64□□□□□ -1.35
APOC1-201ENST00000586638 K7EP34 96 aa6.64□□□□□ -1.35
APOC1-201ENST00000586638 NCR3O14931 201 aa6.64□□□□□ -1.35
APOC1-201ENST00000586638 RTL8CO15255 209 aa6.64□□□□□ -1.35
APOC1-201ENST00000586638 SLPIP03973 132 aa6.64□□□□□ -1.35
APOC1-201ENST00000586638 LINC00337Q8N6G1 96 aa6.64□□□□□ -1.35
APOC1-201ENST00000586638 SPCS1Q9Y6A9 102 aa6.64□□□□□ -1.35
APOC1-201ENST00000586638 LOC107984156A0A0G2JMH3 177 aa6.63□□□□□ -1.35
APOC1-201ENST00000586638 PSMB2P49721 201 aa6.63□□□□□ -1.35
APOC1-201ENST00000586638 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
APOC1-201ENST00000586638 ARL17AQ8IVW1 177 aa6.63□□□□□ -1.35
APOC1-201ENST00000586638 XAGE1AQ9HD64 81 aa6.63□□□□□ -1.35
APOC1-201ENST00000586638 TRIAP1O43715 76 aa6.62□□□□□ -1.35
APOC1-201ENST00000586638 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
APOC1-201ENST00000586638 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
APOC1-201ENST00000586638 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
APOC1-201ENST00000586638 TRAV13-2A0A0B4J235 113 aa6.61□□□□□ -1.35
APOC1-201ENST00000586638 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
APOC1-201ENST00000586638 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
APOC1-201ENST00000586638 PRR3P79522 188 aaKnown RBP6.61□□□□□ -1.35
APOC1-201ENST00000586638 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
APOC1-201ENST00000586638 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
APOC1-201ENST00000586638 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
APOC1-201ENST00000586638 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.6□□□□□ -1.35
APOC1-201ENST00000586638 NDUFC2O95298 119 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 UBE2V1Q13404 147 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 RNF151Q2KHN1 245 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 Q6ZR54 194 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 Q6ZRP5 223 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
APOC1-201ENST00000586638 PKHD1P08F94 4074 aa6.6□□□□□ -1.35
APOC1-201ENST00000586638 LRCOL1A6NCL2 159 aa6.59□□□□□ -1.35
APOC1-201ENST00000586638 TCL1BO95988 128 aa6.59□□□□□ -1.35
APOC1-201ENST00000586638 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.35
APOC1-201ENST00000586638 C14orf177Q52M58 125 aa6.59□□□□□ -1.35
APOC1-201ENST00000586638 OR13C6PQ8NH95 151 aa6.59□□□□□ -1.35
APOC1-201ENST00000586638 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
APOC1-201ENST00000586638 TLX1NBP0CAT3 122 aa6.58□□□□□ -1.36
APOC1-201ENST00000586638 VPREB1P12018 145 aa6.58□□□□□ -1.36
APOC1-201ENST00000586638 C9orf129Q5T035 196 aaKnown RBP6.58□□□□□ -1.36
APOC1-201ENST00000586638 PKD1P98161 4303 aa6.58□□□□□ -1.36
APOC1-201ENST00000586638 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
APOC1-201ENST00000586638 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
APOC1-201ENST00000586638 CNBPP62633 177 aaKnown RBP6.57□□□□□ -1.36
APOC1-201ENST00000586638 MTURNQ8N3F0 131 aa6.57□□□□□ -1.36
APOC1-201ENST00000586638 CLEC2BQ92478 149 aa6.57□□□□□ -1.36
APOC1-201ENST00000586638 H3BMG7 143 aa6.56□□□□□ -1.36
APOC1-201ENST00000586638 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
APOC1-201ENST00000586638 C1orf134Q5TEV5 83 aa6.56□□□□□ -1.36
APOC1-201ENST00000586638 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
APOC1-201ENST00000586638 SERTAD4-AS1Q5TG53 156 aa6.55□□□□□ -1.36
APOC1-201ENST00000586638 A0A087WTM6 91 aa6.54□□□□□ -1.36
APOC1-201ENST00000586638 A0A096LNI7 61 aa6.54□□□□□ -1.36
APOC1-201ENST00000586638 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
APOC1-201ENST00000586638 COX6CP09669 75 aa6.54□□□□□ -1.36
APOC1-201ENST00000586638 RPL28P46779 137 aaKnown RBP6.54□□□□□ -1.36
APOC1-201ENST00000586638 S100A7L2Q5SY68 101 aa6.54□□□□□ -1.36
APOC1-201ENST00000586638 TRBV20-1A0A075B6N2 111 aa6.53□□□□□ -1.36
APOC1-201ENST00000586638 TRBV10-3A0A0K0K1G6 114 aa6.53□□□□□ -1.36
APOC1-201ENST00000586638 FAM168BA1KXE4 195 aa6.53□□□□□ -1.36
APOC1-201ENST00000586638 C16orf90A8MZG2 172 aa6.53□□□□□ -1.36
APOC1-201ENST00000586638 ATXN8Q156A1 80 aa6.53□□□□□ -1.36
APOC1-201ENST00000586638 Q8N814 137 aa6.53□□□□□ -1.36
APOC1-201ENST00000586638 IGKV2-24A0A0C4DH68 120 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 LST1O00453 97 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 CDK2AP2O75956 126 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 IGLV6-57P01721 117 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 FUSP35637 526 aaKnown RBP eCLIP6.52□□□□□ -1.37
APOC1-201ENST00000586638 LINC01620Q4KN68 170 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 FAM19A5Q7Z5A7 132 aaPredicted RBP6.52□□□□□ -1.37
APOC1-201ENST00000586638 FAM218AQ96MZ4 157 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
APOC1-201ENST00000586638 DMBT1Q9UGM3 2413 aaPredicted RBP6.52□□□□□ -1.37
APOC1-201ENST00000586638 M0R378 163 aa6.51□□□□□ -1.37
APOC1-201ENST00000586638 CHTF8P0CG12 524 aa6.51□□□□□ -1.37
APOC1-201ENST00000586638 TNP2Q05952 138 aa6.51□□□□□ -1.37
APOC1-201ENST00000586638 NKAPP1Q8N9T2 125 aa6.51□□□□□ -1.37
APOC1-201ENST00000586638 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
APOC1-201ENST00000586638 TRAV23DV6A0A075B6W5 121 aa6.5□□□□□ -1.37
APOC1-201ENST00000586638 C9JAW5 83 aa6.5□□□□□ -1.37
APOC1-201ENST00000586638 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
APOC1-201ENST00000586638 C7orf33Q8WU49 177 aa6.5□□□□□ -1.37
APOC1-201ENST00000586638 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
APOC1-201ENST00000586638 HSPG2P98160 4391 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms