RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	LINC00614	P0C842	121 aa		9.37	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	C11orf86	A6NJI1	115 aa		9.36	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	PPDPF	Q9H3Y8	114 aa		9.36	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	IFITM2	Q01629	132 aa		9.35	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	PMCHL1	Q16048	86 aa		9.35	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	BAGE3	Q86Y29	109 aa		9.35	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	HIGD2A	Q9BW72	106 aa		9.35	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	TMEM170B	Q5T4T1	132 aa		9.34	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	C18orf32	Q8TCD1	76 aa		9.34	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	SPRR4	Q96PI1	79 aa		9.34	□□□□□ -0.91
PRKAR1A-206	ENST00000585460	HBD	P02042	147 aa		9.33	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	LINC00158	P58513	81 aa		9.33	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	SPAG11A	Q6PDA7	123 aa		9.33	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	C10orf91	Q5T1B1	145 aa		9.32	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	SFTA2	Q6UW10	78 aa		9.32	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	RPS10P5	Q9NQ39	176 aa		9.32	□□□□□ -0.92
PRKAR1A-206	ENST00000585460		A0A0U1RRA0	63 aa		9.31	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	TRAPPC1	Q9Y5R8	145 aa		9.31	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	CHTOP	Q9Y3Y2	248 aa	Known RBP	9.29	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	RHEB	Q15382	184 aa		9.28	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	C4orf48	Q5BLP8	95 aa		9.28	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	DAND5	Q8N907	189 aa		9.28	□□□□□ -0.92
PRKAR1A-206	ENST00000585460	TMEM223	A0PJW6	202 aa		9.27	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	FP248	Q71RG6	208 aa	Predicted RBP	9.27	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	COMMD7	Q86VX2	200 aa		9.27	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	SMCR5	Q8TEV8	140 aa		9.27	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	SMIM13	P0DJ93	91 aa		9.26	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	SPRR1A	P35321	89 aa		9.26	□□□□□ -0.93
PRKAR1A-206	ENST00000585460		Q8NBF4	154 aa		9.26	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	KCNQ1DN	Q9H478	68 aa		9.26	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	ZNF706	Q9Y5V0	76 aa	Predicted RBP	9.26	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	9.25	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	KRTAP13-3	Q3SY46	172 aa		9.25	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	BOD1L2	Q8IYS8	172 aa		9.25	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	LINC00337	Q8N6G1	96 aa		9.25	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	KRTAP9-6	A0A140TA67	174 aa		9.24	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	PRY	O14603	147 aa		9.24	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	ATP6V1G1	O75348	118 aa		9.23	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	TRAV12-1	A0A0B4J245	112 aa		9.22	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	NCR3	O14931	201 aa		9.22	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	MIR7-3HG	Q8N6C7	128 aa		9.22	□□□□□ -0.93
PRKAR1A-206	ENST00000585460	SPINK1	P00995	79 aa		9.21	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	ASB16-AS1	Q495Z4	193 aa		9.21	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	IFI27L1	Q96BM0	104 aa		9.21	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	TRBV10-3	A0A0K0K1G6	114 aa		9.2	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	ETDC	A0A1B0GVM5	59 aa		9.2	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	LINC00483	Q53H64	154 aa		9.2	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	MEIG1	Q5JSS6	88 aa		9.2	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	KRTAP4-1	Q9BYQ7	146 aa		9.2	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	ERC2-IT1	O76042	136 aa		9.18	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	HERV-K104	P63124	156 aa		9.18	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	GAGE2A	Q6NT46	116 aa		9.18	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	CHCHD1	Q96BP2	118 aa	Known RBP	9.18	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	LINC00587	B1AMM8	73 aa		9.17	□□□□□ -0.94
PRKAR1A-206	ENST00000585460		B5MCH6	92 aa		9.17	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	NDUFA12	Q9UI09	145 aa		9.17	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	MYMX	A0A1B0GTQ4	84 aa		9.15	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	SSBP3-AS1	Q7Z2R9	100 aa		9.15	□□□□□ -0.94
PRKAR1A-206	ENST00000585460	IGLV9-49	A0A0B4J1Y8	123 aa		9.14	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	LOC107984156	A0A0G2JMH3	177 aa		9.14	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	APOC3	P02656	99 aa		9.14	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	ARL17A	Q8IVW1	177 aa		9.14	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	YPEL4	Q96NS1	127 aa		9.14	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	SEC61B	P60468	96 aa	Known RBP	9.13	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	MOBP	Q13875	183 aa		9.13	□□□□□ -0.95
PRKAR1A-206	ENST00000585460		Q8N377	158 aa		9.13	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	FAM19A2	Q8N3H0	131 aa		9.13	□□□□□ -0.95
PRKAR1A-206	ENST00000585460		Q9BRP9	147 aa		9.13	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	MAP1LC3C	Q9BXW4	147 aa		9.13	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	LINC01547	P58512	204 aa	Predicted RBP	9.12	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	TSPEAR-AS2	P59090	65 aa		9.12	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	SNAPIN	O95295	136 aa		9.11	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	DDT	P30046	118 aa		9.11	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	RPS29	P62273	56 aa	Known RBP	9.11	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	S100A12	P80511	92 aa		9.11	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	TRBV10-2	A0A0K0K1G8	114 aa		9.1	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	SVBP	Q8N300	66 aa		9.1	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	LEPROT	O15243	131 aa		9.09	□□□□□ -0.95
PRKAR1A-206	ENST00000585460	SLC25A20	O43772	301 aa		9.09	□□□□□ -0.95
PRKAR1A-206	ENST00000585460		H0Y8G0	127 aa		9.08	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	HSBP1	O75506	76 aa		9.08	□□□□□ -0.96
PRKAR1A-206	ENST00000585460		Q6ZRX8	168 aa		9.08	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	IGLV6-57	P01721	117 aa		9.06	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	XP32	Q5T750	250 aa		9.06	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	LCE2D	Q5TA82	110 aa	Predicted RBP	9.06	□□□□□ -0.96
PRKAR1A-206	ENST00000585460		J3QQQ9	107 aa		9.05	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	NDUFA5	Q16718	116 aa		9.05	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	SPANXB1	Q9NS25	103 aa	Predicted RBP	9.05	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	EIF4EBP3	O60516	100 aa	Predicted RBP	9.03	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	LEPROTL1	O95214	131 aa		9.03	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	NDUFC2	O95298	119 aa		9.03	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	LINC00310	P59036	64 aa		9.03	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	S100A7L2	Q5SY68	101 aa		9.03	□□□□□ -0.96
PRKAR1A-206	ENST00000585460	PLN	P26678	52 aa		9.02	□□□□□ -0.97
PRKAR1A-206	ENST00000585460	LCE2C	Q5TA81	110 aa		9.02	□□□□□ -0.97
PRKAR1A-206	ENST00000585460	SOSTDC1	Q6X4U4	206 aa		9.02	□□□□□ -0.97
PRKAR1A-206	ENST00000585460	ST20-AS1	Q8NBB2	130 aa		9.02	□□□□□ -0.97
PRKAR1A-206	ENST00000585460	NMU	P48645	174 aa		9.01	□□□□□ -0.97
PRKAR1A-206	ENST00000585460	JOSD1	Q15040	202 aa	Predicted RBP	9.01	□□□□□ -0.97
PRKAR1A-206	ENST00000585460	ADAMTSL4-AS1	Q5T5F5	129 aa		9.01	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms