RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	IGKV2-28	A0A075B6P5	120 aa		7.95	□□□□□ -1.14
SREBF1-223	ENST00000584760	IGKV2D-28	P01615	120 aa		7.95	□□□□□ -1.14
SREBF1-223	ENST00000584760	FABP4	P15090	132 aa		7.95	□□□□□ -1.14
SREBF1-223	ENST00000584760	PLN	P26678	52 aa		7.95	□□□□□ -1.14
SREBF1-223	ENST00000584760	LINC00158	P58513	81 aa		7.95	□□□□□ -1.14
SREBF1-223	ENST00000584760	TSPEAR-AS2	P59090	65 aa		7.95	□□□□□ -1.14
SREBF1-223	ENST00000584760	RPL24	P83731	157 aa	Known RBP	7.95	□□□□□ -1.14
SREBF1-223	ENST00000584760		A0A0U1RRA0	63 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BK	O60814	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BJ	P06899	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BO	P23527	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BB	P33778	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BD	P58876	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BC	P62807	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HERV-K104	P63124	156 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST2H2BE	Q16778	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BH	Q93079	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BN	Q99877	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	HIST1H2BM	Q99879	126 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	NDUFA12	Q9UI09	145 aa		7.94	□□□□□ -1.14
SREBF1-223	ENST00000584760	DPM2	O94777	84 aa		7.93	□□□□□ -1.14
SREBF1-223	ENST00000584760	SMIM13	P0DJ93	91 aa		7.93	□□□□□ -1.14
SREBF1-223	ENST00000584760	PMCHL2	Q9BQD1	86 aa		7.93	□□□□□ -1.14
SREBF1-223	ENST00000584760	LEPROT	O15243	131 aa		7.92	□□□□□ -1.14
SREBF1-223	ENST00000584760	RPL13A	P40429	203 aa	Known RBP	7.92	□□□□□ -1.14
SREBF1-223	ENST00000584760	MEIG1	Q5JSS6	88 aa		7.92	□□□□□ -1.14
SREBF1-223	ENST00000584760	TMEM126A	Q9H061	195 aa		7.92	□□□□□ -1.14
SREBF1-223	ENST00000584760	MYMX	A0A1B0GTQ4	84 aa		7.91	□□□□□ -1.14
SREBF1-223	ENST00000584760	TMEM238	C9JI98	176 aa		7.91	□□□□□ -1.14
SREBF1-223	ENST00000584760	IGKC	P01834	107 aa		7.91	□□□□□ -1.14
SREBF1-223	ENST00000584760	UBE2A	P49459	152 aa		7.91	□□□□□ -1.14
SREBF1-223	ENST00000584760	MIR7-3HG	Q8N6C7	128 aa		7.91	□□□□□ -1.14
SREBF1-223	ENST00000584760	PLEKHB2	Q96CS7	222 aa		7.91	□□□□□ -1.14
SREBF1-223	ENST00000584760	MAP1LC3C	Q9BXW4	147 aa		7.91	□□□□□ -1.14
SREBF1-223	ENST00000584760		J3QQQ9	107 aa		7.9	□□□□□ -1.14
SREBF1-223	ENST00000584760		M0R378	163 aa		7.9	□□□□□ -1.14
SREBF1-223	ENST00000584760	PRLH	P81277	87 aa		7.9	□□□□□ -1.14
SREBF1-223	ENST00000584760	LPA	P08519	4548 aa		7.89	□□□□□ -1.15
SREBF1-223	ENST00000584760		A0A087X002	238 aa		7.89	□□□□□ -1.15
SREBF1-223	ENST00000584760	LINC00587	B1AMM8	73 aa		7.89	□□□□□ -1.15
SREBF1-223	ENST00000584760	HERVK_113	P61574	105 aa		7.89	□□□□□ -1.15
SREBF1-223	ENST00000584760	KRTAP9-2	Q9BYQ4	174 aa		7.89	□□□□□ -1.15
SREBF1-223	ENST00000584760	ATP6V1G1	O75348	118 aa		7.88	□□□□□ -1.15
SREBF1-223	ENST00000584760	FAM19A1	Q7Z5A9	133 aa		7.88	□□□□□ -1.15
SREBF1-223	ENST00000584760	BOD1L2	Q8IYS8	172 aa		7.88	□□□□□ -1.15
SREBF1-223	ENST00000584760	SYS1-DBNDD2	H3BUS1	97 aa		7.87	□□□□□ -1.15
SREBF1-223	ENST00000584760	NMU	P48645	174 aa		7.87	□□□□□ -1.15
SREBF1-223	ENST00000584760	IGKV2D-26	A0A0A0MRZ7	120 aa		7.86	□□□□□ -1.15
SREBF1-223	ENST00000584760	NCR3	O14931	201 aa		7.86	□□□□□ -1.15
SREBF1-223	ENST00000584760	LOC107984156	A0A0G2JMH3	177 aa		7.85	□□□□□ -1.15
SREBF1-223	ENST00000584760		E9PLD3	99 aa		7.85	□□□□□ -1.15
SREBF1-223	ENST00000584760	LGALS3	P17931	250 aa	Known RBP	7.85	□□□□□ -1.15
SREBF1-223	ENST00000584760	COA6	Q5JTJ3	125 aa	Known RBP	7.85	□□□□□ -1.15
SREBF1-223	ENST00000584760	ARL17A	Q8IVW1	177 aa		7.85	□□□□□ -1.15
SREBF1-223	ENST00000584760	DAND5	Q8N907	189 aa		7.85	□□□□□ -1.15
SREBF1-223	ENST00000584760	PRY	O14603	147 aa		7.84	□□□□□ -1.15
SREBF1-223	ENST00000584760	CRYGA	P11844	174 aa		7.84	□□□□□ -1.15
SREBF1-223	ENST00000584760	LINC01545	Q5VT33	79 aa		7.84	□□□□□ -1.15
SREBF1-223	ENST00000584760	ANAPC11	Q9NYG5	84 aa		7.84	□□□□□ -1.15
SREBF1-223	ENST00000584760	SPRR1A	P35321	89 aa		7.83	□□□□□ -1.16
SREBF1-223	ENST00000584760	FAM229B	Q4G0N7	80 aa		7.83	□□□□□ -1.16
SREBF1-223	ENST00000584760	KRTAP13-2	Q52LG2	175 aa		7.83	□□□□□ -1.16
SREBF1-223	ENST00000584760	PET117	Q6UWS5	81 aa		7.82	□□□□□ -1.16
SREBF1-223	ENST00000584760	KCNQ1DN	Q9H478	68 aa		7.82	□□□□□ -1.16
SREBF1-223	ENST00000584760		A0A0J9YXY3	114 aa		7.81	□□□□□ -1.16
SREBF1-223	ENST00000584760	TRBV10-3	A0A0K0K1G6	114 aa		7.81	□□□□□ -1.16
SREBF1-223	ENST00000584760	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	7.81	□□□□□ -1.16
SREBF1-223	ENST00000584760	C3orf79	P0CE67	100 aa		7.81	□□□□□ -1.16
SREBF1-223	ENST00000584760	LINC00337	Q8N6G1	96 aa		7.81	□□□□□ -1.16
SREBF1-223	ENST00000584760	TYMSOS	Q8TAI1	123 aa		7.81	□□□□□ -1.16
SREBF1-223	ENST00000584760	TRBV10-2	A0A0K0K1G8	114 aa		7.8	□□□□□ -1.16
SREBF1-223	ENST00000584760	HIGD2A	Q9BW72	106 aa		7.8	□□□□□ -1.16
SREBF1-223	ENST00000584760	EIF4EBP3	O60516	100 aa	Predicted RBP	7.79	□□□□□ -1.16
SREBF1-223	ENST00000584760	ADAMTSL4-AS1	Q5T5F5	129 aa		7.79	□□□□□ -1.16
SREBF1-223	ENST00000584760	SOSTDC1	Q6X4U4	206 aa		7.79	□□□□□ -1.16
SREBF1-223	ENST00000584760	MIEN1	Q9BRT3	115 aa		7.79	□□□□□ -1.16
SREBF1-223	ENST00000584760	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.79	□□□□□ -1.16
SREBF1-223	ENST00000584760		A0A0U1RQV1	116 aa		7.78	□□□□□ -1.16
SREBF1-223	ENST00000584760	NDUFC2	O95298	119 aa		7.78	□□□□□ -1.16
SREBF1-223	ENST00000584760	PRR4	Q16378	134 aa		7.78	□□□□□ -1.16
SREBF1-223	ENST00000584760	MUC2	Q02817	5179 aa		7.77	□□□□□ -1.17
SREBF1-223	ENST00000584760	KRTDAP	P60985	99 aa		7.77	□□□□□ -1.17
SREBF1-223	ENST00000584760	SPRR4	Q96PI1	79 aa		7.77	□□□□□ -1.17
SREBF1-223	ENST00000584760	LITAF	Q99732	161 aa		7.77	□□□□□ -1.17
SREBF1-223	ENST00000584760	ETDC	A0A1B0GVM5	59 aa		7.76	□□□□□ -1.17
SREBF1-223	ENST00000584760	TSPAN13	O95857	204 aa		7.76	□□□□□ -1.17
SREBF1-223	ENST00000584760	DDT	P30046	118 aa		7.76	□□□□□ -1.17
SREBF1-223	ENST00000584760	KRTAP9-6	A0A140TA67	174 aa		7.75	□□□□□ -1.17
SREBF1-223	ENST00000584760	IGLV6-57	P01721	117 aa		7.75	□□□□□ -1.17
SREBF1-223	ENST00000584760	NPC2	P61916	151 aa		7.75	□□□□□ -1.17
SREBF1-223	ENST00000584760	S100A12	P80511	92 aa		7.75	□□□□□ -1.17
SREBF1-223	ENST00000584760	SMCR5	Q8TEV8	140 aa		7.75	□□□□□ -1.17
SREBF1-223	ENST00000584760	TTTY13	Q9BZ97	58 aa		7.75	□□□□□ -1.17
SREBF1-223	ENST00000584760	ZNF815P	A8K554	130 aa		7.74	□□□□□ -1.17
SREBF1-223	ENST00000584760		B5MCH6	92 aa		7.74	□□□□□ -1.17
SREBF1-223	ENST00000584760	TIMM17B	O60830	172 aa		7.74	□□□□□ -1.17
SREBF1-223	ENST00000584760	C3orf22	Q8N5N4	141 aa		7.74	□□□□□ -1.17
SREBF1-223	ENST00000584760	LINC00304	Q8N9R0	145 aa		7.74	□□□□□ -1.17
SREBF1-223	ENST00000584760	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 108 ms