RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 ANAPC11Q9NYG5 84 aa8.09□□□□□ -1.11
CDK5RAP3-233ENST00000584186 A0A087X002 238 aa8.08□□□□□ -1.12
CDK5RAP3-233ENST00000584186 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
CDK5RAP3-233ENST00000584186 H0Y8G0 127 aa8.08□□□□□ -1.12
CDK5RAP3-233ENST00000584186 TMEM238C9JI98 176 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 TSPAN13O95857 204 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 TRGC2P03986 189 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 CRYGAP11844 174 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 PRLHP81277 87 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 PRR4Q16378 134 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 Q8NDZ9 215 aa8.07□□□□□ -1.12
CDK5RAP3-233ENST00000584186 ATP6V1G1O75348 118 aa8.06□□□□□ -1.12
CDK5RAP3-233ENST00000584186 KRTAP13-1Q8IUC0 172 aa8.06□□□□□ -1.12
CDK5RAP3-233ENST00000584186 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
CDK5RAP3-233ENST00000584186 TMEM126AQ9H061 195 aa8.06□□□□□ -1.12
CDK5RAP3-233ENST00000584186 SMIM13P0DJ93 91 aa8.04□□□□□ -1.12
CDK5RAP3-233ENST00000584186 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
CDK5RAP3-233ENST00000584186 SLC7A5P1Q8MH63 180 aa8.04□□□□□ -1.12
CDK5RAP3-233ENST00000584186 M0R378 163 aa8.03□□□□□ -1.12
CDK5RAP3-233ENST00000584186 SERF1AO75920 110 aa8.03□□□□□ -1.12
CDK5RAP3-233ENST00000584186 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
CDK5RAP3-233ENST00000584186 BOD1L2Q8IYS8 172 aa8.01□□□□□ -1.13
CDK5RAP3-233ENST00000584186 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
CDK5RAP3-233ENST00000584186 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
CDK5RAP3-233ENST00000584186 NCR3O14931 201 aa8□□□□□ -1.13
CDK5RAP3-233ENST00000584186 FABP4P15090 132 aa8□□□□□ -1.13
CDK5RAP3-233ENST00000584186 LINC00310P59036 64 aa8□□□□□ -1.13
CDK5RAP3-233ENST00000584186 HERV-K104P63124 156 aa8□□□□□ -1.13
CDK5RAP3-233ENST00000584186 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
CDK5RAP3-233ENST00000584186 HIGD2AQ9BW72 106 aa8□□□□□ -1.13
CDK5RAP3-233ENST00000584186 IGKV2D-26A0A0A0MRZ7 120 aa7.99□□□□□ -1.13
CDK5RAP3-233ENST00000584186 MYMXA0A1B0GTQ4 84 aa7.99□□□□□ -1.13
CDK5RAP3-233ENST00000584186 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
CDK5RAP3-233ENST00000584186 HSPB8Q9UJY1 196 aa7.99□□□□□ -1.13
CDK5RAP3-233ENST00000584186 LINC00587B1AMM8 73 aa7.98□□□□□ -1.13
CDK5RAP3-233ENST00000584186 PLNP26678 52 aa7.98□□□□□ -1.13
CDK5RAP3-233ENST00000584186 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
CDK5RAP3-233ENST00000584186 COLCA2A8K830 154 aa7.97□□□□□ -1.13
CDK5RAP3-233ENST00000584186 TSPEAR-AS2P59090 65 aa7.97□□□□□ -1.13
CDK5RAP3-233ENST00000584186 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
CDK5RAP3-233ENST00000584186 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
CDK5RAP3-233ENST00000584186 LEPROTO15243 131 aa7.96□□□□□ -1.14
CDK5RAP3-233ENST00000584186 DPM2O94777 84 aa7.96□□□□□ -1.14
CDK5RAP3-233ENST00000584186 DAND5Q8N907 189 aa7.96□□□□□ -1.14
CDK5RAP3-233ENST00000584186 LINC00304Q8N9R0 145 aa7.96□□□□□ -1.14
CDK5RAP3-233ENST00000584186 HERVK_113P61574 105 aa7.95□□□□□ -1.14
CDK5RAP3-233ENST00000584186 J3QQQ9 107 aa7.94□□□□□ -1.14
CDK5RAP3-233ENST00000584186 PRYO14603 147 aa7.94□□□□□ -1.14
CDK5RAP3-233ENST00000584186 IGKCP01834 107 aa7.94□□□□□ -1.14
CDK5RAP3-233ENST00000584186 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
CDK5RAP3-233ENST00000584186 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
CDK5RAP3-233ENST00000584186 TRBV10-3A0A0K0K1G6 114 aa7.92□□□□□ -1.14
CDK5RAP3-233ENST00000584186 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
CDK5RAP3-233ENST00000584186 C3orf22Q8N5N4 141 aa7.92□□□□□ -1.14
CDK5RAP3-233ENST00000584186 KCNQ1DNQ9H478 68 aa7.92□□□□□ -1.14
CDK5RAP3-233ENST00000584186 S100A12P80511 92 aa7.91□□□□□ -1.14
CDK5RAP3-233ENST00000584186 LINC00337Q8N6G1 96 aa7.91□□□□□ -1.14
CDK5RAP3-233ENST00000584186 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
CDK5RAP3-233ENST00000584186 MIEN1Q9BRT3 115 aa7.91□□□□□ -1.14
CDK5RAP3-233ENST00000584186 ZNF706Q9Y5V0 76 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-233ENST00000584186 LCE2BO14633 110 aa7.9□□□□□ -1.14
CDK5RAP3-233ENST00000584186 NMUP48645 174 aa7.9□□□□□ -1.14
CDK5RAP3-233ENST00000584186 DDTP30046 118 aa7.89□□□□□ -1.15
CDK5RAP3-233ENST00000584186 SPRR1AP35321 89 aa7.89□□□□□ -1.15
CDK5RAP3-233ENST00000584186 SMCR5Q8TEV8 140 aa7.89□□□□□ -1.15
CDK5RAP3-233ENST00000584186 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
CDK5RAP3-233ENST00000584186 NPC2P61916 151 aa7.88□□□□□ -1.15
CDK5RAP3-233ENST00000584186 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-233ENST00000584186 LOC107984156A0A0G2JMH3 177 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 TRBV10-2A0A0K0K1G8 114 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 ARL17AQ8IVW1 177 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 SPANXB1Q9NS25 103 aaPredicted RBP7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 MUC2Q02817 5179 aa7.86□□□□□ -1.15
CDK5RAP3-233ENST00000584186 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
CDK5RAP3-233ENST00000584186 B5MCH6 92 aa7.85□□□□□ -1.15
CDK5RAP3-233ENST00000584186 E9PLD3 99 aa7.85□□□□□ -1.15
CDK5RAP3-233ENST00000584186 SYS1-DBNDD2H3BUS1 97 aa7.85□□□□□ -1.15
CDK5RAP3-233ENST00000584186 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
CDK5RAP3-233ENST00000584186 ADAMTSL4-AS1Q5T5F5 129 aa7.84□□□□□ -1.15
CDK5RAP3-233ENST00000584186 GAGE2AQ6NT46 116 aa7.84□□□□□ -1.15
CDK5RAP3-233ENST00000584186 SPAG11AQ6PDA7 123 aa7.84□□□□□ -1.15
CDK5RAP3-233ENST00000584186 IGLV7-46A0A075B6I9 117 aa7.83□□□□□ -1.16
CDK5RAP3-233ENST00000584186 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
CDK5RAP3-233ENST00000584186 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
CDK5RAP3-233ENST00000584186 NDUFC2O95298 119 aa7.83□□□□□ -1.16
CDK5RAP3-233ENST00000584186 SOSTDC1Q6X4U4 206 aa7.83□□□□□ -1.16
CDK5RAP3-233ENST00000584186 Q8NBF4 154 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms