RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 URB1-AS1Q96HZ7 61 aa6.62□□□□□ -1.35
CCDC47-206ENST00000584112 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
CCDC47-206ENST00000584112 PFN2P35080 140 aa6.61□□□□□ -1.35
CCDC47-206ENST00000584112 COX17Q14061 63 aa6.61□□□□□ -1.35
CCDC47-206ENST00000584112 PMCHL1Q16048 86 aa6.6□□□□□ -1.35
CCDC47-206ENST00000584112 BAGE3Q86Y29 109 aa6.6□□□□□ -1.35
CCDC47-206ENST00000584112 ERG28Q9UKR5 140 aa6.6□□□□□ -1.35
CCDC47-206ENST00000584112 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
CCDC47-206ENST00000584112 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
CCDC47-206ENST00000584112 UBE2AP49459 152 aa6.59□□□□□ -1.35
CCDC47-206ENST00000584112 RPL24P83731 157 aaKnown RBP6.59□□□□□ -1.35
CCDC47-206ENST00000584112 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
CCDC47-206ENST00000584112 CRYGAP11844 174 aa6.58□□□□□ -1.36
CCDC47-206ENST00000584112 SND1-IT1Q9HBX3 110 aa6.58□□□□□ -1.36
CCDC47-206ENST00000584112 IGKV2-28A0A075B6P5 120 aa6.57□□□□□ -1.36
CCDC47-206ENST00000584112 IGKV2D-28P01615 120 aa6.57□□□□□ -1.36
CCDC47-206ENST00000584112 VPREB1P12018 145 aa6.57□□□□□ -1.36
CCDC47-206ENST00000584112 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
CCDC47-206ENST00000584112 CHCHD1Q96BP2 118 aaKnown RBP6.57□□□□□ -1.36
CCDC47-206ENST00000584112 CHTOPQ9Y3Y2 248 aaKnown RBP6.57□□□□□ -1.36
CCDC47-206ENST00000584112 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
CCDC47-206ENST00000584112 TRAV12-1A0A0B4J245 112 aa6.56□□□□□ -1.36
CCDC47-206ENST00000584112 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
CCDC47-206ENST00000584112 ZNF625Q96I27 306 aaPredicted RBP6.56□□□□□ -1.36
CCDC47-206ENST00000584112 A0A087X002 238 aa6.55□□□□□ -1.36
CCDC47-206ENST00000584112 SCO1O75880 301 aa6.55□□□□□ -1.36
CCDC47-206ENST00000584112 FAM229BQ4G0N7 80 aa6.54□□□□□ -1.36
CCDC47-206ENST00000584112 IFI27L1Q96BM0 104 aa6.54□□□□□ -1.36
CCDC47-206ENST00000584112 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
CCDC47-206ENST00000584112 TMEM126AQ9H061 195 aa6.54□□□□□ -1.36
CCDC47-206ENST00000584112 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
CCDC47-206ENST00000584112 TSPAN13O95857 204 aa6.53□□□□□ -1.36
CCDC47-206ENST00000584112 LINC00158P58513 81 aa6.53□□□□□ -1.36
CCDC47-206ENST00000584112 FAM19A1Q7Z5A9 133 aa6.53□□□□□ -1.36
CCDC47-206ENST00000584112 TMEM238C9JI98 176 aa6.52□□□□□ -1.37
CCDC47-206ENST00000584112 ATP6V1G1O75348 118 aa6.52□□□□□ -1.37
CCDC47-206ENST00000584112 PRLHP81277 87 aa6.52□□□□□ -1.37
CCDC47-206ENST00000584112 IGKV2D-26A0A0A0MRZ7 120 aa6.51□□□□□ -1.37
CCDC47-206ENST00000584112 M0R378 163 aa6.51□□□□□ -1.37
CCDC47-206ENST00000584112 HSBP1O75506 76 aa6.51□□□□□ -1.37
CCDC47-206ENST00000584112 ANAPC11Q9NYG5 84 aa6.51□□□□□ -1.37
CCDC47-206ENST00000584112 USH2AO75445 5202 aa6.5□□□□□ -1.37
CCDC47-206ENST00000584112 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
CCDC47-206ENST00000584112 HERV-K104P63124 156 aa6.5□□□□□ -1.37
CCDC47-206ENST00000584112 KRTAP13-2Q52LG2 175 aa6.5□□□□□ -1.37
CCDC47-206ENST00000584112 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
CCDC47-206ENST00000584112 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
CCDC47-206ENST00000584112 Q8NDZ9 215 aa6.5□□□□□ -1.37
CCDC47-206ENST00000584112 A0A0U1RRA0 63 aa6.49□□□□□ -1.37
CCDC47-206ENST00000584112 CBLN2Q8IUK8 224 aa6.49□□□□□ -1.37
CCDC47-206ENST00000584112 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
CCDC47-206ENST00000584112 CTAG1AP78358 180 aa6.48□□□□□ -1.37
CCDC47-206ENST00000584112 FAM19A2Q8N3H0 131 aa6.48□□□□□ -1.37
CCDC47-206ENST00000584112 MAP1LC3CQ9BXW4 147 aa6.48□□□□□ -1.37
CCDC47-206ENST00000584112 MYMXA0A1B0GTQ4 84 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 H0Y8G0 127 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 PRYO14603 147 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 LEPROTL1O95214 131 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 BOD1L2Q8IYS8 172 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 PLEKHB2Q96CS7 222 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 HIGD2AQ9BW72 106 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
CCDC47-206ENST00000584112 TRGC2P03986 189 aa6.46□□□□□ -1.38
CCDC47-206ENST00000584112 CDIP1Q9H305 208 aa6.46□□□□□ -1.38
CCDC47-206ENST00000584112 ZNF706Q9Y5V0 76 aaPredicted RBP6.46□□□□□ -1.38
CCDC47-206ENST00000584112 PLNP26678 52 aa6.45□□□□□ -1.38
CCDC47-206ENST00000584112 S100A12P80511 92 aa6.45□□□□□ -1.38
CCDC47-206ENST00000584112 NCR3O14931 201 aa6.44□□□□□ -1.38
CCDC47-206ENST00000584112 LEPROTO15243 131 aa6.44□□□□□ -1.38
CCDC47-206ENST00000584112 SERF1AO75920 110 aa6.44□□□□□ -1.38
CCDC47-206ENST00000584112 LINC00337Q8N6G1 96 aa6.44□□□□□ -1.38
CCDC47-206ENST00000584112 SPRR4Q96PI1 79 aa6.44□□□□□ -1.38
CCDC47-206ENST00000584112 HSPB8Q9UJY1 196 aa6.44□□□□□ -1.38
CCDC47-206ENST00000584112 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
CCDC47-206ENST00000584112 HERVK_113P61574 105 aa6.43□□□□□ -1.38
CCDC47-206ENST00000584112 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
CCDC47-206ENST00000584112 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
CCDC47-206ENST00000584112 DPM2O94777 84 aa6.42□□□□□ -1.38
CCDC47-206ENST00000584112 SPRR1AP35321 89 aa6.42□□□□□ -1.38
CCDC47-206ENST00000584112 LINC00310P59036 64 aa6.42□□□□□ -1.38
CCDC47-206ENST00000584112 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
CCDC47-206ENST00000584112 C3orf22Q8N5N4 141 aa6.42□□□□□ -1.38
CCDC47-206ENST00000584112 RETNLBQ9BQ08 111 aa6.42□□□□□ -1.38
CCDC47-206ENST00000584112 LOC107984156A0A0G2JMH3 177 aa6.41□□□□□ -1.38
CCDC47-206ENST00000584112 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
CCDC47-206ENST00000584112 J3QQQ9 107 aa6.41□□□□□ -1.38
CCDC47-206ENST00000584112 NMUP48645 174 aa6.41□□□□□ -1.38
CCDC47-206ENST00000584112 TSPEAR-AS2P59090 65 aa6.41□□□□□ -1.38
CCDC47-206ENST00000584112 ARL17AQ8IVW1 177 aa6.41□□□□□ -1.38
CCDC47-206ENST00000584112 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
CCDC47-206ENST00000584112 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
CCDC47-206ENST00000584112 KRTAP4-16G5E9R7 235 aaPredicted RBP6.4□□□□□ -1.38
CCDC47-206ENST00000584112 IGKCP01834 107 aa6.4□□□□□ -1.38
CCDC47-206ENST00000584112 FABP4P15090 132 aa6.4□□□□□ -1.38
CCDC47-206ENST00000584112 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.38
CCDC47-206ENST00000584112 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
CCDC47-206ENST00000584112 DAND5Q8N907 189 aa6.39□□□□□ -1.39
CCDC47-206ENST00000584112 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
CCDC47-206ENST00000584112 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 282.3 ms