RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 PPDPFLQ8WWR9 84 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 DNAH17Q9UFH2 4485 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.81□□□□□ -0.52
NDEL1-217ENST00000583683 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 TIMM17BO60830 172 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 PFN2P35080 140 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 PSMB2P49721 201 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 TNP2Q05952 138 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
NDEL1-217ENST00000583683 CARD19Q96LW7 228 aa11.81□□□□□ -0.52
NDEL1-217ENST00000583683 FRAS1Q86XX4 4008 aa11.8□□□□□ -0.52
NDEL1-217ENST00000583683 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
NDEL1-217ENST00000583683 TEN1Q86WV5 123 aa11.8□□□□□ -0.52
NDEL1-217ENST00000583683 M0QXV9 152 aa11.79□□□□□ -0.52
NDEL1-217ENST00000583683 COX17Q14061 63 aa11.79□□□□□ -0.52
NDEL1-217ENST00000583683 CFC1BP0CG36 223 aa11.79□□□□□ -0.52
NDEL1-217ENST00000583683 CFC1P0CG37 223 aa11.79□□□□□ -0.52
NDEL1-217ENST00000583683 DAND5Q8N907 189 aa11.79□□□□□ -0.52
NDEL1-217ENST00000583683 TCL1BO95988 128 aa11.78□□□□□ -0.52
NDEL1-217ENST00000583683 LINC00158P58513 81 aa11.78□□□□□ -0.52
NDEL1-217ENST00000583683 LOC107984156A0A0G2JMH3 177 aa11.77□□□□□ -0.52
NDEL1-217ENST00000583683 ARL17AQ8IVW1 177 aa11.77□□□□□ -0.52
NDEL1-217ENST00000583683 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
NDEL1-217ENST00000583683 SPANXCQ9NY87 97 aa11.76□□□□□ -0.53
NDEL1-217ENST00000583683 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
NDEL1-217ENST00000583683 MIR7-3HGQ8N6C7 128 aa11.76□□□□□ -0.53
NDEL1-217ENST00000583683 RYR2Q92736 4967 aa11.76□□□□□ -0.53
NDEL1-217ENST00000583683 LINC01600Q96MT4 127 aa11.74□□□□□ -0.53
NDEL1-217ENST00000583683 PRO1854Q9UHT4 67 aa11.74□□□□□ -0.53
NDEL1-217ENST00000583683 MT-ATP8P03928 68 aa11.74□□□□□ -0.53
NDEL1-217ENST00000583683 NDUFC2-KCTD14E9PQ53 114 aa11.73□□□□□ -0.53
NDEL1-217ENST00000583683 XGP55808 180 aa11.73□□□□□ -0.53
NDEL1-217ENST00000583683 EIF4EBP3O60516 100 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-217ENST00000583683 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
NDEL1-217ENST00000583683 NPC2P61916 151 aa11.72□□□□□ -0.53
NDEL1-217ENST00000583683 FAT2Q9NYQ8 4349 aa11.72□□□□□ -0.53
NDEL1-217ENST00000583683 A0A0B4J2C4 111 aa11.72□□□□□ -0.53
NDEL1-217ENST00000583683 C9orf163Q8N9P6 203 aa11.72□□□□□ -0.53
NDEL1-217ENST00000583683 SOSTDC1Q6X4U4 206 aa11.71□□□□□ -0.54
NDEL1-217ENST00000583683 Q6ZRP5 223 aa11.71□□□□□ -0.54
NDEL1-217ENST00000583683 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.54
NDEL1-217ENST00000583683 SND1-IT1Q9HBX3 110 aa11.71□□□□□ -0.54
NDEL1-217ENST00000583683 FUSP35637 526 aaKnown RBP eCLIP11.7□□□□□ -0.54
NDEL1-217ENST00000583683 MUSTN1Q8IVN3 82 aa11.7□□□□□ -0.54
NDEL1-217ENST00000583683 ANKRD29Q8N6D5 301 aa11.7□□□□□ -0.54
NDEL1-217ENST00000583683 IFITM1P13164 125 aa11.69□□□□□ -0.54
NDEL1-217ENST00000583683 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
NDEL1-217ENST00000583683 LINC01620Q4KN68 170 aa11.68□□□□□ -0.54
NDEL1-217ENST00000583683 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
NDEL1-217ENST00000583683 A4D1N5 150 aa11.67□□□□□ -0.54
NDEL1-217ENST00000583683 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
NDEL1-217ENST00000583683 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
NDEL1-217ENST00000583683 XAGE1AQ9HD64 81 aa11.67□□□□□ -0.54
NDEL1-217ENST00000583683 GAGE2DQ9UEU5 116 aa11.67□□□□□ -0.54
NDEL1-217ENST00000583683 SLC25A20O43772 301 aa11.66□□□□□ -0.54
NDEL1-217ENST00000583683 KRTAP10-2P60368 255 aa11.66□□□□□ -0.54
NDEL1-217ENST00000583683 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
NDEL1-217ENST00000583683 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.54
NDEL1-217ENST00000583683 SCGB1C2P0DMR2 95 aa11.65□□□□□ -0.54
NDEL1-217ENST00000583683 COPS9Q8WXC6 57 aa11.65□□□□□ -0.54
NDEL1-217ENST00000583683 SDIM1Q6ZPB5 146 aa11.65□□□□□ -0.55
NDEL1-217ENST00000583683 DNAH11Q96DT5 4516 aa11.64□□□□□ -0.55
NDEL1-217ENST00000583683 GAGE2BQ13066 116 aa11.64□□□□□ -0.55
NDEL1-217ENST00000583683 HECTD4Q9Y4D8 3996 aa11.63□□□□□ -0.55
NDEL1-217ENST00000583683 PKD1P98161 4303 aa11.63□□□□□ -0.55
NDEL1-217ENST00000583683 A0A096LNI7 61 aa11.63□□□□□ -0.55
NDEL1-217ENST00000583683 C9orf129Q5T035 196 aaKnown RBP11.63□□□□□ -0.55
NDEL1-217ENST00000583683 C16orf90A8MZG2 172 aa11.63□□□□□ -0.55
NDEL1-217ENST00000583683 SVIPQ8NHG7 77 aa11.63□□□□□ -0.55
NDEL1-217ENST00000583683 RYR3Q15413 4870 aa11.62□□□□□ -0.55
NDEL1-217ENST00000583683 C9JAW5 83 aa11.62□□□□□ -0.55
NDEL1-217ENST00000583683 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
NDEL1-217ENST00000583683 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
NDEL1-217ENST00000583683 Q8NDZ9 215 aa11.61□□□□□ -0.55
NDEL1-217ENST00000583683 PKIGQ9Y2B9 76 aa11.6□□□□□ -0.55
NDEL1-217ENST00000583683 IGKV2-24A0A0C4DH68 120 aa11.59□□□□□ -0.55
NDEL1-217ENST00000583683 CHTF8P0CG12 524 aa11.58□□□□□ -0.56
NDEL1-217ENST00000583683 TRBV10-2A0A0K0K1G8 114 aa11.58□□□□□ -0.56
NDEL1-217ENST00000583683 NDUFC2O95298 119 aa11.58□□□□□ -0.56
NDEL1-217ENST00000583683 Q6Q795 121 aa11.58□□□□□ -0.56
NDEL1-217ENST00000583683 IGKV2-28A0A075B6P5 120 aa11.56□□□□□ -0.56
NDEL1-217ENST00000583683 A0A1B0GVY2 172 aa11.56□□□□□ -0.56
NDEL1-217ENST00000583683 IGKV2D-28P01615 120 aa11.56□□□□□ -0.56
NDEL1-217ENST00000583683 PRR3P79522 188 aaKnown RBP11.56□□□□□ -0.56
NDEL1-217ENST00000583683 FAM168BA1KXE4 195 aa11.56□□□□□ -0.56
NDEL1-217ENST00000583683 PANO1I0J062 215 aa11.56□□□□□ -0.56
NDEL1-217ENST00000583683 VPREB1P12018 145 aa11.56□□□□□ -0.56
NDEL1-217ENST00000583683 DNAH5Q8TE73 4624 aa11.55□□□□□ -0.56
NDEL1-217ENST00000583683 SERTAD4-AS1Q5TG53 156 aa11.55□□□□□ -0.56
NDEL1-217ENST00000583683 ANAPC13Q9BS18 74 aa11.55□□□□□ -0.56
NDEL1-217ENST00000583683 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
NDEL1-217ENST00000583683 TRIAP1O43715 76 aa11.54□□□□□ -0.56
NDEL1-217ENST00000583683 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
NDEL1-217ENST00000583683 LINC00474Q9P2X8 69 aa11.54□□□□□ -0.56
NDEL1-217ENST00000583683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
NDEL1-217ENST00000583683 H3BT86 120 aa11.52□□□□□ -0.57
NDEL1-217ENST00000583683 H7C2G1 150 aa11.52□□□□□ -0.57
NDEL1-217ENST00000583683 NCR3O14931 201 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms