RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	HTN1	P15515	57 aa		2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	PCP4	P48539	62 aa		2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	RNASE13	Q5GAN3	156 aa	Known RBP	2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	TMEM170B	Q5T4T1	132 aa		2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	CFAP126	Q5VTH2	177 aa		2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	MTURN	Q8N3F0	131 aa		2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	PTH2	Q96A98	100 aa		2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	SPANXB1	Q9NS25	103 aa	Predicted RBP	2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	MRPL16	Q9NX20	251 aa	Known RBP	2.85	□□□□□ -1.95
MSI2-216	ENST00000582772	IGHV3-64	A0A075B6Q5	118 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	IGKV2-29	A2NJV5	120 aa	Predicted RBP	2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	LINC01549	A6NIU2	74 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772		H3BMG7	143 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	RHOD	O00212	210 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	GAGE7	O76087	117 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	GAGE12F	P0CL80	117 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	GAGE12G	P0CL81	117 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	GAGE12I	P0CL82	117 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	HERVK_113	P61574	105 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	PAPPA-AS1	Q5QFB9	102 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772		Q6ZUT4	128 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	SH2D6	Q7Z4S9	175 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	SLC25A29	Q8N8R3	303 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	LITAF	Q99732	161 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	VPS25	Q9BRG1	176 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	KRTAP4-9	Q9BYQ8	210 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	PRO0255	Q9UI72	69 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772	PYGO1	Q9Y3Y4	419 aa		2.84	□□□□□ -1.95
MSI2-216	ENST00000582772		A0A0J9YXY3	114 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772		A8MWV9	139 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772		K7EQD1	137 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772		K7ERU9	68 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	APOM	O95445	188 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	IGHV3-53	P01767	116 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	CRYBA4	P53673	196 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	UBE2D3	P61077	147 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	UBE2D2	P62837	147 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	MRPS36	P82909	103 aa	Known RBP	2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	RPL24	P83731	157 aa	Known RBP	2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	PIK3CD-AS1	Q5SR53	167 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	SFTA2	Q6UW10	78 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	SCGB1D4	Q6XE38	83 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	RMI2	Q96E14	147 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	LINC01587	Q99440	93 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	SPX	Q9BT56	116 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	VCX2	Q9H322	139 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	UBE2D4	Q9Y2X8	147 aa		2.83	□□□□□ -1.96
MSI2-216	ENST00000582772	TINCR	A0A1B0GVN0	87 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772		A4D1N5	150 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	TCL1B	O95988	128 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	IGHV3-33	P01772	117 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	SPINK8	P0C7L1	97 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	IGHV3-30-3	P0DP02	117 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	LGALS3	P17931	250 aa	Known RBP	2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	COX6A2	Q02221	97 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	KRTAP13-3	Q3SY46	172 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	ETDB	Q3ZM63	59 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	GAGE13	Q4V321	117 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	ADAMTSL4-AS1	Q5T5F5	129 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	NTM-AS1	Q6ZSK4	140 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772		Q6ZTI0	123 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	MUSTN1	Q8IVN3	82 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	DNAJC30	Q96LL9	226 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	CARD19	Q96LW7	228 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772	PPDPF	Q9H3Y8	114 aa		2.82	□□□□□ -1.96
MSI2-216	ENST00000582772		F8W1H4	67 aa		2.81	□□□□□ -1.96
MSI2-216	ENST00000582772	LINC00694	P0DN24	101 aa		2.81	□□□□□ -1.96
MSI2-216	ENST00000582772	PSMB2	P49721	201 aa		2.81	□□□□□ -1.96
MSI2-216	ENST00000582772	DAZ2	Q13117	558 aa	Known RBP	2.81	□□□□□ -1.96
MSI2-216	ENST00000582772	DIRC1	Q969H9	104 aa		2.81	□□□□□ -1.96
MSI2-216	ENST00000582772	TIMM21	Q9BVV7	248 aa		2.81	□□□□□ -1.96
MSI2-216	ENST00000582772	SPANXA1	Q9NS26	97 aa		2.81	□□□□□ -1.96
MSI2-216	ENST00000582772	IGLV5-45	A0A087WSX0	123 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	TRGV1	A0A0A0MS02	117 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	TRAV4	A0A0B4J268	109 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772		A0A0B4J2C4	111 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	IGHV1-58	A0A0C4DH39	117 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	LOC107984156	A0A0G2JMH3	177 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	LOC100131303	A0A0U1RQF7	123 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	SPRR5	A0A1B0GTR4	108 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772		H0Y9J4	135 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	MT2A	P02795	61 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	SPRR2E	P22531	72 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	SPRR2B	P35325	72 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	SPRR2A	P35326	72 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	COTL1	Q14019	142 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	ARL17A	Q8IVW1	177 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	SPANXD	Q9BXN6	97 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	KRTAP4-2	Q9BYR5	136 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	SPANXC	Q9NY87	97 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	CDKN2A-AS1	Q9UH64	79 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	PRO1854	Q9UHT4	67 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	NDUFA12	Q9UI09	145 aa		2.8	□□□□□ -1.96
MSI2-216	ENST00000582772	IGLV5-39	A0A0G2JS06	123 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	GAGE12J	A6NER3	117 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772		H7C2G1	150 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	TRIAP1	O43715	76 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	NPC2	P61916	151 aa		2.79	□□□□□ -1.96
MSI2-216	ENST00000582772	FOXI1	Q12951	378 aa		2.79	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms