RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 NDUFA6P56556 154 aa8.38□□□□□ -1.07
ITGB4-208ENST00000582629 M0R378 163 aa8.37□□□□□ -1.07
ITGB4-208ENST00000582629 TPRXLQ17RH7 258 aa8.37□□□□□ -1.07
ITGB4-208ENST00000582629 A0A096LNJ9 63 aa8.36□□□□□ -1.07
ITGB4-208ENST00000582629 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
ITGB4-208ENST00000582629 URB1-AS1Q96HZ7 61 aa8.36□□□□□ -1.07
ITGB4-208ENST00000582629 CDIP1Q9H305 208 aa8.36□□□□□ -1.07
ITGB4-208ENST00000582629 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
ITGB4-208ENST00000582629 ATP6V1G1O75348 118 aa8.35□□□□□ -1.07
ITGB4-208ENST00000582629 HBDP02042 147 aa8.35□□□□□ -1.07
ITGB4-208ENST00000582629 C18orf32Q8TCD1 76 aa8.35□□□□□ -1.07
ITGB4-208ENST00000582629 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
ITGB4-208ENST00000582629 TRGC2P03986 189 aa8.34□□□□□ -1.07
ITGB4-208ENST00000582629 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
ITGB4-208ENST00000582629 PLEKHB2Q96CS7 222 aa8.34□□□□□ -1.07
ITGB4-208ENST00000582629 C11orf86A6NJI1 115 aa8.33□□□□□ -1.08
ITGB4-208ENST00000582629 LINC00614P0C842 121 aa8.33□□□□□ -1.08
ITGB4-208ENST00000582629 Q8NDZ9 215 aa8.33□□□□□ -1.08
ITGB4-208ENST00000582629 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
ITGB4-208ENST00000582629 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
ITGB4-208ENST00000582629 BAGE3Q86Y29 109 aa8.32□□□□□ -1.08
ITGB4-208ENST00000582629 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
ITGB4-208ENST00000582629 HIGD2AQ9BW72 106 aa8.32□□□□□ -1.08
ITGB4-208ENST00000582629 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
ITGB4-208ENST00000582629 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
ITGB4-208ENST00000582629 LINC00158P58513 81 aa8.29□□□□□ -1.08
ITGB4-208ENST00000582629 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
ITGB4-208ENST00000582629 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
ITGB4-208ENST00000582629 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
ITGB4-208ENST00000582629 S100A1P23297 94 aa8.28□□□□□ -1.08
ITGB4-208ENST00000582629 CHTOPQ9Y3Y2 248 aaKnown RBP8.28□□□□□ -1.08
ITGB4-208ENST00000582629 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
ITGB4-208ENST00000582629 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
ITGB4-208ENST00000582629 PRYO14603 147 aa8.26□□□□□ -1.09
ITGB4-208ENST00000582629 LINC00310P59036 64 aa8.26□□□□□ -1.09
ITGB4-208ENST00000582629 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
ITGB4-208ENST00000582629 FP248Q71RG6 208 aaPredicted RBP8.26□□□□□ -1.09
ITGB4-208ENST00000582629 TRAV12-1A0A0B4J245 112 aa8.24□□□□□ -1.09
ITGB4-208ENST00000582629 BOD1L2Q8IYS8 172 aa8.24□□□□□ -1.09
ITGB4-208ENST00000582629 LINC00337Q8N6G1 96 aa8.24□□□□□ -1.09
ITGB4-208ENST00000582629 SMIM13P0DJ93 91 aa8.23□□□□□ -1.09
ITGB4-208ENST00000582629 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
ITGB4-208ENST00000582629 FAM19A2Q8N3H0 131 aa8.23□□□□□ -1.09
ITGB4-208ENST00000582629 SERF1AO75920 110 aa8.22□□□□□ -1.09
ITGB4-208ENST00000582629 SPRR1AP35321 89 aa8.22□□□□□ -1.09
ITGB4-208ENST00000582629 Q8NBF4 154 aa8.22□□□□□ -1.09
ITGB4-208ENST00000582629 KCNQ1DNQ9H478 68 aa8.22□□□□□ -1.09
ITGB4-208ENST00000582629 NCR3O14931 201 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BKO60814 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BJP06899 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BOP23527 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BBP33778 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BDP58876 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BCP62807 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HERV-K104P63124 156 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST2H2BEQ16778 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.21□□□□□ -1.1
ITGB4-208ENST00000582629 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 DAND5Q8N907 189 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 SMCR5Q8TEV8 140 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BHQ93079 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 IFI27L1Q96BM0 104 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BNQ99877 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.1
ITGB4-208ENST00000582629 ETDCA0A1B0GVM5 59 aa8.2□□□□□ -1.1
ITGB4-208ENST00000582629 LINC00587B1AMM8 73 aa8.2□□□□□ -1.1
ITGB4-208ENST00000582629 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
ITGB4-208ENST00000582629 HSBP1O75506 76 aa8.19□□□□□ -1.1
ITGB4-208ENST00000582629 SPINK1P00995 79 aa8.19□□□□□ -1.1
ITGB4-208ENST00000582629 KRTAP13-3Q3SY46 172 aa8.19□□□□□ -1.1
ITGB4-208ENST00000582629 LINC00483Q53H64 154 aa8.19□□□□□ -1.1
ITGB4-208ENST00000582629 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
ITGB4-208ENST00000582629 S100A12P80511 92 aa8.18□□□□□ -1.1
ITGB4-208ENST00000582629 MAP1LC3CQ9BXW4 147 aa8.17□□□□□ -1.1
ITGB4-208ENST00000582629 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
ITGB4-208ENST00000582629 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
ITGB4-208ENST00000582629 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
ITGB4-208ENST00000582629 FABP4P15090 132 aa8.15□□□□□ -1.1
ITGB4-208ENST00000582629 GAGE2AQ6NT46 116 aa8.15□□□□□ -1.1
ITGB4-208ENST00000582629 B5MCH6 92 aa8.14□□□□□ -1.11
ITGB4-208ENST00000582629 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
ITGB4-208ENST00000582629 LOC107984156A0A0G2JMH3 177 aa8.13□□□□□ -1.11
ITGB4-208ENST00000582629 ARL17AQ8IVW1 177 aa8.13□□□□□ -1.11
ITGB4-208ENST00000582629 TRBV10-2A0A0K0K1G8 114 aa8.12□□□□□ -1.11
ITGB4-208ENST00000582629 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
ITGB4-208ENST00000582629 H0Y8G0 127 aa8.12□□□□□ -1.11
ITGB4-208ENST00000582629 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
ITGB4-208ENST00000582629 DDTP30046 118 aa8.12□□□□□ -1.11
ITGB4-208ENST00000582629 MOBPQ13875 183 aa8.12□□□□□ -1.11
ITGB4-208ENST00000582629 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
ITGB4-208ENST00000582629 IGLV9-49A0A0B4J1Y8 123 aa8.11□□□□□ -1.11
ITGB4-208ENST00000582629 LEPROTO15243 131 aa8.11□□□□□ -1.11
ITGB4-208ENST00000582629 ERC2-IT1O76042 136 aa8.11□□□□□ -1.11
ITGB4-208ENST00000582629 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
ITGB4-208ENST00000582629 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
ITGB4-208ENST00000582629 Q6ZRX8 168 aa8.1□□□□□ -1.11
ITGB4-208ENST00000582629 Q8N377 158 aa8.1□□□□□ -1.11
ITGB4-208ENST00000582629 LINC01547P58512 204 aaPredicted RBP8.09□□□□□ -1.11
ITGB4-208ENST00000582629 COA6Q5JTJ3 125 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms