RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 UBE2V1Q13404 147 aa8.89□□□□□ -0.99
CSNK1D-220ENST00000581737 Q1RN00 199 aa8.89□□□□□ -0.99
CSNK1D-220ENST00000581737 KRTAP26-1Q6PEX3 210 aa8.89□□□□□ -0.99
CSNK1D-220ENST00000581737 LINC00308Q8TCZ7 52 aa8.89□□□□□ -0.99
CSNK1D-220ENST00000581737 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
CSNK1D-220ENST00000581737 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
CSNK1D-220ENST00000581737 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
CSNK1D-220ENST00000581737 K7EP34 96 aa8.87□□□□□ -0.99
CSNK1D-220ENST00000581737 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
CSNK1D-220ENST00000581737 CFC1P0CG37 223 aa8.87□□□□□ -0.99
CSNK1D-220ENST00000581737 ADAMTSL4-AS1Q5T5F5 129 aa8.87□□□□□ -0.99
CSNK1D-220ENST00000581737 Q8N814 137 aa8.87□□□□□ -0.99
CSNK1D-220ENST00000581737 NTN5Q8WTR8 489 aaPredicted RBP8.87□□□□□ -0.99
CSNK1D-220ENST00000581737 USP17L23D6RBM5 183 aa8.86□□□□□ -0.99
CSNK1D-220ENST00000581737 LECT2O14960 151 aa8.86□□□□□ -0.99
CSNK1D-220ENST00000581737 COX6CP09669 75 aa8.86□□□□□ -0.99
CSNK1D-220ENST00000581737 PSMB2P49721 201 aa8.86□□□□□ -0.99
CSNK1D-220ENST00000581737 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
CSNK1D-220ENST00000581737 TRAV13-2A0A0B4J235 113 aa8.85□□□□□ -0.99
CSNK1D-220ENST00000581737 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
CSNK1D-220ENST00000581737 NPC2P61916 151 aa8.85□□□□□ -0.99
CSNK1D-220ENST00000581737 TRBV20-1A0A075B6N2 111 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 TSPAN13O95857 204 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 PFN2P35080 140 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 KRTAP10-2P60368 255 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 WFDC2Q14508 124 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 DAND5Q8N907 189 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 C2orf48Q96LS8 159 aa8.84□□□□□ -0.99
CSNK1D-220ENST00000581737 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
CSNK1D-220ENST00000581737 LOC107984156A0A0G2JMH3 177 aa8.83□□□□□ -1
CSNK1D-220ENST00000581737 TRBV30A0A0K0K1B3 111 aa8.83□□□□□ -1
CSNK1D-220ENST00000581737 SCGB1C2P0DMR2 95 aa8.83□□□□□ -1
CSNK1D-220ENST00000581737 ARL17AQ8IVW1 177 aa8.83□□□□□ -1
CSNK1D-220ENST00000581737 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
CSNK1D-220ENST00000581737 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
CSNK1D-220ENST00000581737 SND1-IT1Q9HBX3 110 aa8.82□□□□□ -1
CSNK1D-220ENST00000581737 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.81□□□□□ -1
CSNK1D-220ENST00000581737 RPL13AP40429 203 aaKnown RBP8.81□□□□□ -1
CSNK1D-220ENST00000581737 CAMK2N2Q96S95 79 aa8.81□□□□□ -1
CSNK1D-220ENST00000581737 NAA38Q9BRA0 125 aaKnown RBP8.81□□□□□ -1
CSNK1D-220ENST00000581737 C2orf82Q6UX34 121 aa8.8□□□□□ -1
CSNK1D-220ENST00000581737 C15orf56Q8N910 161 aa8.8□□□□□ -1
CSNK1D-220ENST00000581737 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
CSNK1D-220ENST00000581737 H7C2G1 150 aa8.79□□□□□ -1
CSNK1D-220ENST00000581737 NDUFC2O95298 119 aa8.79□□□□□ -1
CSNK1D-220ENST00000581737 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
CSNK1D-220ENST00000581737 DNAH8Q96JB1 4490 aa8.78□□□□□ -1
CSNK1D-220ENST00000581737 FUSP35637 526 aaKnown RBP eCLIP8.77□□□□□ -1.01
CSNK1D-220ENST00000581737 ATXN8Q156A1 80 aa8.77□□□□□ -1.01
CSNK1D-220ENST00000581737 HIGD2BQ4VC39 106 aa8.77□□□□□ -1.01
CSNK1D-220ENST00000581737 SOSTDC1Q6X4U4 206 aa8.77□□□□□ -1.01
CSNK1D-220ENST00000581737 EPM2AB3EWF7 344 aa8.76□□□□□ -1.01
CSNK1D-220ENST00000581737 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
CSNK1D-220ENST00000581737 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
CSNK1D-220ENST00000581737 CBY1Q9Y3M2 126 aa8.76□□□□□ -1.01
CSNK1D-220ENST00000581737 F8W1H4 67 aa8.75□□□□□ -1.01
CSNK1D-220ENST00000581737 UNQ6190/PRO20217Q6UXQ8 127 aa8.75□□□□□ -1.01
CSNK1D-220ENST00000581737 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
CSNK1D-220ENST00000581737 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
CSNK1D-220ENST00000581737 RNF151Q2KHN1 245 aa8.74□□□□□ -1.01
CSNK1D-220ENST00000581737 XGP55808 180 aa8.73□□□□□ -1.01
CSNK1D-220ENST00000581737 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
CSNK1D-220ENST00000581737 CARD19Q96LW7 228 aa8.73□□□□□ -1.01
CSNK1D-220ENST00000581737 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
CSNK1D-220ENST00000581737 TRIAP1O43715 76 aa8.72□□□□□ -1.01
CSNK1D-220ENST00000581737 C9orf163Q8N9P6 203 aa8.72□□□□□ -1.01
CSNK1D-220ENST00000581737 TMEM126AQ9H061 195 aa8.72□□□□□ -1.01
CSNK1D-220ENST00000581737 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.02
CSNK1D-220ENST00000581737 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.02
CSNK1D-220ENST00000581737 SNCGO76070 127 aa8.71□□□□□ -1.02
CSNK1D-220ENST00000581737 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
CSNK1D-220ENST00000581737 SRRM2Q9UQ35 2752 aaKnown RBP8.71□□□□□ -1.02
CSNK1D-220ENST00000581737 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 H0YGX0 51 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 H3BMG7 143 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 TCL1BO95988 128 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 C10orf25Q5T742 122 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 Q5VSD8 79 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 Q6ZRU5 148 aa8.7□□□□□ -1.02
CSNK1D-220ENST00000581737 SLPIP03973 132 aa8.69□□□□□ -1.02
CSNK1D-220ENST00000581737 KRTAP10-1P60331 282 aa8.69□□□□□ -1.02
CSNK1D-220ENST00000581737 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
CSNK1D-220ENST00000581737 LINC00526Q96FQ7 95 aa8.69□□□□□ -1.02
CSNK1D-220ENST00000581737 LINC00337Q8N6G1 96 aa8.68□□□□□ -1.02
CSNK1D-220ENST00000581737 LRP1Q07954 4544 aaKnown RBP8.68□□□□□ -1.02
CSNK1D-220ENST00000581737 IGKV2-28A0A075B6P5 120 aa8.67□□□□□ -1.02
CSNK1D-220ENST00000581737 J3QR89 54 aa8.67□□□□□ -1.02
CSNK1D-220ENST00000581737 IGKV2D-28P01615 120 aa8.67□□□□□ -1.02
CSNK1D-220ENST00000581737 TLX1NBP0CAT3 122 aa8.67□□□□□ -1.02
CSNK1D-220ENST00000581737 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
CSNK1D-220ENST00000581737 M0QXV9 152 aa8.66□□□□□ -1.02
CSNK1D-220ENST00000581737 LST1O00453 97 aa8.66□□□□□ -1.02
CSNK1D-220ENST00000581737 FLG2Q5D862 2391 aaPredicted RBP8.65□□□□□ -1.02
CSNK1D-220ENST00000581737 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
CSNK1D-220ENST00000581737 K7ERU9 68 aa8.65□□□□□ -1.02
CSNK1D-220ENST00000581737 DNAL4O96015 105 aa8.65□□□□□ -1.02
CSNK1D-220ENST00000581737 TRACP01848 142 aa8.65□□□□□ -1.02
CSNK1D-220ENST00000581737 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms