RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 C6orf223Q8N319 242 aa11.77□□□□□ -0.53
EIF4A1-216ENST00000580888 C15orf56Q8N910 161 aa11.77□□□□□ -0.53
EIF4A1-216ENST00000580888 HSPG2P98160 4391 aa11.77□□□□□ -0.53
EIF4A1-216ENST00000580888 PFN2P35080 140 aa11.76□□□□□ -0.53
EIF4A1-216ENST00000580888 C10orf25Q5T742 122 aa11.76□□□□□ -0.53
EIF4A1-216ENST00000580888 C2orf48Q96LS8 159 aa11.76□□□□□ -0.53
EIF4A1-216ENST00000580888 UNQ6190/PRO20217Q6UXQ8 127 aa11.75□□□□□ -0.53
EIF4A1-216ENST00000580888 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
EIF4A1-216ENST00000580888 ABCA13Q86UQ4 5058 aa11.75□□□□□ -0.53
EIF4A1-216ENST00000580888 IGKV2-28A0A075B6P5 120 aa11.74□□□□□ -0.53
EIF4A1-216ENST00000580888 IGKV2D-28P01615 120 aa11.74□□□□□ -0.53
EIF4A1-216ENST00000580888 SND1-IT1Q9HBX3 110 aa11.74□□□□□ -0.53
EIF4A1-216ENST00000580888 TRBV20-1A0A075B6N2 111 aa11.73□□□□□ -0.53
EIF4A1-216ENST00000580888 IGKV2D-24A0A075B6R9 120 aa11.73□□□□□ -0.53
EIF4A1-216ENST00000580888 RPL13AP40429 203 aaKnown RBP11.72□□□□□ -0.53
EIF4A1-216ENST00000580888 TNP2Q05952 138 aa11.72□□□□□ -0.53
EIF4A1-216ENST00000580888 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
EIF4A1-216ENST00000580888 TRAV13-2A0A0B4J235 113 aa11.71□□□□□ -0.53
EIF4A1-216ENST00000580888 NDUFC2O95298 119 aa11.71□□□□□ -0.53
EIF4A1-216ENST00000580888 C9orf116Q5BN46 136 aaPredicted RBP11.71□□□□□ -0.53
EIF4A1-216ENST00000580888 RMI2Q96E14 147 aa11.71□□□□□ -0.53
EIF4A1-216ENST00000580888 LINC00526Q96FQ7 95 aa11.71□□□□□ -0.53
EIF4A1-216ENST00000580888 C6orf48Q9UBA6 75 aa11.71□□□□□ -0.53
EIF4A1-216ENST00000580888 ZNF561-AS1K7EIQ3 104 aa11.7□□□□□ -0.54
EIF4A1-216ENST00000580888 TRIAP1O43715 76 aa11.7□□□□□ -0.54
EIF4A1-216ENST00000580888 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
EIF4A1-216ENST00000580888 PRO0461Q9UI25 63 aa11.7□□□□□ -0.54
EIF4A1-216ENST00000580888 TCL1BO95988 128 aa11.69□□□□□ -0.54
EIF4A1-216ENST00000580888 LINC00337Q8N6G1 96 aa11.69□□□□□ -0.54
EIF4A1-216ENST00000580888 H3BMG7 143 aa11.68□□□□□ -0.54
EIF4A1-216ENST00000580888 H7C2G1 150 aa11.68□□□□□ -0.54
EIF4A1-216ENST00000580888 PSMB2P49721 201 aa11.68□□□□□ -0.54
EIF4A1-216ENST00000580888 Q1RN00 199 aa11.68□□□□□ -0.54
EIF4A1-216ENST00000580888 KRTAP1-5Q9BYS1 174 aa11.68□□□□□ -0.54
EIF4A1-216ENST00000580888 F8W1H4 67 aa11.67□□□□□ -0.54
EIF4A1-216ENST00000580888 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
EIF4A1-216ENST00000580888 Q9HAA7 133 aa11.67□□□□□ -0.54
EIF4A1-216ENST00000580888 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
EIF4A1-216ENST00000580888 CAMK2N2Q96S95 79 aa11.66□□□□□ -0.54
EIF4A1-216ENST00000580888 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
EIF4A1-216ENST00000580888 Q6ZRU5 148 aa11.65□□□□□ -0.54
EIF4A1-216ENST00000580888 C16orf90A8MZG2 172 aa11.64□□□□□ -0.55
EIF4A1-216ENST00000580888 COX6CP09669 75 aa11.64□□□□□ -0.55
EIF4A1-216ENST00000580888 RNF151Q2KHN1 245 aa11.64□□□□□ -0.55
EIF4A1-216ENST00000580888 LINC01600Q96MT4 127 aa11.64□□□□□ -0.55
EIF4A1-216ENST00000580888 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
EIF4A1-216ENST00000580888 SYCNQ0VAF6 134 aa11.61□□□□□ -0.55
EIF4A1-216ENST00000580888 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
EIF4A1-216ENST00000580888 Q8NDZ9 215 aa11.61□□□□□ -0.55
EIF4A1-216ENST00000580888 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
EIF4A1-216ENST00000580888 M0QXV9 152 aa11.6□□□□□ -0.55
EIF4A1-216ENST00000580888 LST1O00453 97 aa11.6□□□□□ -0.55
EIF4A1-216ENST00000580888 TLX1NBP0CAT3 122 aa11.6□□□□□ -0.55
EIF4A1-216ENST00000580888 SMCPP49901 116 aaPredicted RBP11.6□□□□□ -0.55
EIF4A1-216ENST00000580888 NDUFC2-KCTD14E9PQ53 114 aa11.59□□□□□ -0.55
EIF4A1-216ENST00000580888 SLPIP03973 132 aa11.59□□□□□ -0.55
EIF4A1-216ENST00000580888 WFDC2Q14508 124 aa11.59□□□□□ -0.55
EIF4A1-216ENST00000580888 TRBV10-2A0A0K0K1G8 114 aa11.58□□□□□ -0.56
EIF4A1-216ENST00000580888 Q6ZRN7 208 aaPredicted RBP11.58□□□□□ -0.56
EIF4A1-216ENST00000580888 SMIM11BQ8TCY0 68 aa11.58□□□□□ -0.56
EIF4A1-216ENST00000580888 KRTAP4-5Q9BYR2 181 aa11.58□□□□□ -0.56
EIF4A1-216ENST00000580888 LINC01620Q4KN68 170 aa11.57□□□□□ -0.56
EIF4A1-216ENST00000580888 PRR3P79522 188 aaKnown RBP11.55□□□□□ -0.56
EIF4A1-216ENST00000580888 CLEC2BQ92478 149 aa11.55□□□□□ -0.56
EIF4A1-216ENST00000580888 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
EIF4A1-216ENST00000580888 TMEM126AQ9H061 195 aa11.55□□□□□ -0.56
EIF4A1-216ENST00000580888 KRTAP10-2P60368 255 aa11.54□□□□□ -0.56
EIF4A1-216ENST00000580888 Q6ZRP5 223 aa11.53□□□□□ -0.56
EIF4A1-216ENST00000580888 H0YGX0 51 aa11.52□□□□□ -0.57
EIF4A1-216ENST00000580888 IGLV6-57P01721 117 aa11.52□□□□□ -0.57
EIF4A1-216ENST00000580888 TRACP01848 142 aa11.52□□□□□ -0.57
EIF4A1-216ENST00000580888 VPREB1P12018 145 aa11.52□□□□□ -0.57
EIF4A1-216ENST00000580888 MTURNQ8N3F0 131 aa11.52□□□□□ -0.57
EIF4A1-216ENST00000580888 OR13C6PQ8NH95 151 aa11.52□□□□□ -0.57
EIF4A1-216ENST00000580888 C9JAW5 83 aa11.51□□□□□ -0.57
EIF4A1-216ENST00000580888 SLC25A20O43772 301 aa11.51□□□□□ -0.57
EIF4A1-216ENST00000580888 OCIAD2Q56VL3 154 aa11.51□□□□□ -0.57
EIF4A1-216ENST00000580888 XAGE1AQ9HD64 81 aa11.51□□□□□ -0.57
EIF4A1-216ENST00000580888 FAM218AQ96MZ4 157 aa11.5□□□□□ -0.57
EIF4A1-216ENST00000580888 PLA2G2DQ9UNK4 145 aa11.5□□□□□ -0.57
EIF4A1-216ENST00000580888 NCR3O14931 201 aa11.49□□□□□ -0.57
EIF4A1-216ENST00000580888 Q8N1X5 172 aa11.49□□□□□ -0.57
EIF4A1-216ENST00000580888 H3BT86 120 aa11.48□□□□□ -0.57
EIF4A1-216ENST00000580888 CNBPP62633 177 aaKnown RBP11.48□□□□□ -0.57
EIF4A1-216ENST00000580888 ETDBQ3ZM63 59 aa11.48□□□□□ -0.57
EIF4A1-216ENST00000580888 C9orf129Q5T035 196 aaKnown RBP11.48□□□□□ -0.57
EIF4A1-216ENST00000580888 ANKRD29Q8N6D5 301 aa11.48□□□□□ -0.57
EIF4A1-216ENST00000580888 C14orf177Q52M58 125 aa11.46□□□□□ -0.57
EIF4A1-216ENST00000580888 TEN1Q86WV5 123 aa11.46□□□□□ -0.57
EIF4A1-216ENST00000580888 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 A0A1B0GX51 115 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 LRCOL1A6NCL2 159 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 M0R378 163 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 LECT2O14960 151 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 RPL18AQ02543 176 aaKnown RBP11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 S100A7L2Q5SY68 101 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 FAT1Q14517 4588 aa11.45□□□□□ -0.58
EIF4A1-216ENST00000580888 VPS13BQ7Z7G8 4022 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms