RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 VPREB1P12018 145 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 PRLHP81277 87 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 RPL24P83731 157 aaKnown RBP7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 FABP9Q0Z7S8 132 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 COX19Q49B96 90 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
CDK5RAP3-213ENST00000579605 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SPAG11AQ6PDA7 123 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 TMEM126AQ9H061 195 aa7.37□□□□□ -1.23
CDK5RAP3-213ENST00000579605 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 COX17Q14061 63 aa7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 CBLN2Q8IUK8 224 aa7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-213ENST00000579605 M0R378 163 aa7.34□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SEC11CQ9BY50 192 aa7.34□□□□□ -1.23
CDK5RAP3-213ENST00000579605 SFTA2Q6UW10 78 aa7.33□□□□□ -1.24
CDK5RAP3-213ENST00000579605 DAND5Q8N907 189 aa7.33□□□□□ -1.24
CDK5RAP3-213ENST00000579605 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
CDK5RAP3-213ENST00000579605 USH2AO75445 5202 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 HBDP02042 147 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 LINC00614P0C842 121 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 TMEM170BQ5T4T1 132 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 HIGD2AQ9BW72 106 aa7.32□□□□□ -1.24
CDK5RAP3-213ENST00000579605 A0A096LNJ9 63 aa7.31□□□□□ -1.24
CDK5RAP3-213ENST00000579605 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
CDK5RAP3-213ENST00000579605 Q8NDZ9 215 aa7.31□□□□□ -1.24
CDK5RAP3-213ENST00000579605 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 LINC00158P58513 81 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 PMCHL1Q16048 86 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 XP32Q5T750 250 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 RPS10P5Q9NQ39 176 aa7.3□□□□□ -1.24
CDK5RAP3-213ENST00000579605 IGLV8-61A0A075B6I0 122 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 C18orf32Q8TCD1 76 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 TRAPPC1Q9Y5R8 145 aa7.29□□□□□ -1.24
CDK5RAP3-213ENST00000579605 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 RHEBQ15382 184 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 Q8NBF4 154 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 ZNF706Q9Y5V0 76 aaPredicted RBP7.28□□□□□ -1.24
CDK5RAP3-213ENST00000579605 PCOTHQ58A44 107 aa7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 COMMD7Q86VX2 200 aa7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 NDUFA12Q9UI09 145 aa7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 CHTOPQ9Y3Y2 248 aaKnown RBP7.27□□□□□ -1.25
CDK5RAP3-213ENST00000579605 ATP6V1G1O75348 118 aa7.26□□□□□ -1.25
CDK5RAP3-213ENST00000579605 IFITM2Q01629 132 aa7.26□□□□□ -1.25
CDK5RAP3-213ENST00000579605 FCGBPQ9Y6R7 5405 aaPredicted RBP7.25□□□□□ -1.25
CDK5RAP3-213ENST00000579605 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
CDK5RAP3-213ENST00000579605 PRYO14603 147 aa7.24□□□□□ -1.25
CDK5RAP3-213ENST00000579605 C10orf91Q5T1B1 145 aa7.24□□□□□ -1.25
CDK5RAP3-213ENST00000579605 NCR3O14931 201 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 SPINK1P00995 79 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 MEIG1Q5JSS6 88 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 BOD1L2Q8IYS8 172 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
CDK5RAP3-213ENST00000579605 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
CDK5RAP3-213ENST00000579605 TRAV12-1A0A0B4J245 112 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 IFI27L1Q96BM0 104 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 KCNQ1DNQ9H478 68 aa7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.26
CDK5RAP3-213ENST00000579605 LINC00587B1AMM8 73 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 SPRR1AP35321 89 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 HERV-K104P63124 156 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 S100A12P80511 92 aa7.2□□□□□ -1.26
CDK5RAP3-213ENST00000579605 Q8N377 158 aa7.19□□□□□ -1.26
CDK5RAP3-213ENST00000579605 CHCHD1Q96BP2 118 aaKnown RBP7.19□□□□□ -1.26
CDK5RAP3-213ENST00000579605 TRBV10-3A0A0K0K1G6 114 aa7.18□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MAP1LC3CQ9BXW4 147 aa7.18□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MYMXA0A1B0GTQ4 84 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 LINC00483Q53H64 154 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 GAGE2AQ6NT46 116 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 FAM19A2Q8N3H0 131 aa7.17□□□□□ -1.26
CDK5RAP3-213ENST00000579605 APOC3P02656 99 aa7.16□□□□□ -1.26
CDK5RAP3-213ENST00000579605 IGLV9-49A0A0B4J1Y8 123 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 B5MCH6 92 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 SLC25A20O43772 301 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 SNAPINO95295 136 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 MOBPQ13875 183 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 NDUFA5Q16718 116 aa7.15□□□□□ -1.26
CDK5RAP3-213ENST00000579605 HSBP1O75506 76 aa7.14□□□□□ -1.27
CDK5RAP3-213ENST00000579605 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
CDK5RAP3-213ENST00000579605 SVBPQ8N300 66 aa7.14□□□□□ -1.27
CDK5RAP3-213ENST00000579605 H0Y8G0 127 aa7.13□□□□□ -1.27
CDK5RAP3-213ENST00000579605 ERC2-IT1O76042 136 aa7.13□□□□□ -1.27
CDK5RAP3-213ENST00000579605 DDTP30046 118 aa7.13□□□□□ -1.27
CDK5RAP3-213ENST00000579605 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
CDK5RAP3-213ENST00000579605 LEPROTO15243 131 aa7.12□□□□□ -1.27
CDK5RAP3-213ENST00000579605 RPS29P62273 56 aaKnown RBP7.12□□□□□ -1.27
CDK5RAP3-213ENST00000579605 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
CDK5RAP3-213ENST00000579605 MIEN1Q9BRT3 115 aa7.11□□□□□ -1.27
CDK5RAP3-213ENST00000579605 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms