RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 A4D1N5 150 aa6.76□□□□□ -1.33
SS18-210ENST00000578700 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
SS18-210ENST00000578700 K7ERJ3 54 aa6.76□□□□□ -1.33
SS18-210ENST00000578700 ADAMTSL4-AS1Q5T5F5 129 aa6.76□□□□□ -1.33
SS18-210ENST00000578700 H3BUT2 72 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 FABP2P12104 132 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 NPC2P61916 151 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 COX17Q14061 63 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 LINC00308Q8TCZ7 52 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 Q9HAA7 133 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 PRO1854Q9UHT4 67 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
SS18-210ENST00000578700 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
SS18-210ENST00000578700 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
SS18-210ENST00000578700 PFN2P35080 140 aa6.74□□□□□ -1.33
SS18-210ENST00000578700 HAMPP81172 84 aa6.74□□□□□ -1.33
SS18-210ENST00000578700 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
SS18-210ENST00000578700 GTF2H5Q6ZYL4 71 aa6.74□□□□□ -1.33
SS18-210ENST00000578700 DAND5Q8N907 189 aa6.74□□□□□ -1.33
SS18-210ENST00000578700 DNAH8Q96JB1 4490 aa6.74□□□□□ -1.33
SS18-210ENST00000578700 A0A1W2PPM0 123 aa6.73□□□□□ -1.33
SS18-210ENST00000578700 F8WDY8 70 aa6.73□□□□□ -1.33
SS18-210ENST00000578700 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
SS18-210ENST00000578700 Q1RN00 199 aa6.73□□□□□ -1.33
SS18-210ENST00000578700 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
SS18-210ENST00000578700 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
SS18-210ENST00000578700 CFC1BP0CG36 223 aa6.72□□□□□ -1.33
SS18-210ENST00000578700 CFC1P0CG37 223 aa6.72□□□□□ -1.33
SS18-210ENST00000578700 KIAA0087Q14695 138 aa6.72□□□□□ -1.33
SS18-210ENST00000578700 C2orf82Q6UX34 121 aa6.72□□□□□ -1.33
SS18-210ENST00000578700 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
SS18-210ENST00000578700 GAGE10A6NGK3 116 aa6.71□□□□□ -1.34
SS18-210ENST00000578700 PSMB2P49721 201 aa6.71□□□□□ -1.34
SS18-210ENST00000578700 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.34
SS18-210ENST00000578700 C2orf48Q96LS8 159 aa6.71□□□□□ -1.34
SS18-210ENST00000578700 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.34
SS18-210ENST00000578700 TRBV30A0A0K0K1B3 111 aa6.7□□□□□ -1.34
SS18-210ENST00000578700 NTN5Q8WTR8 489 aaPredicted RBP6.7□□□□□ -1.34
SS18-210ENST00000578700 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
SS18-210ENST00000578700 GVQW2A0A096LPI5 108 aaPredicted RBP6.69□□□□□ -1.34
SS18-210ENST00000578700 TRAV13-2A0A0B4J235 113 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 H7C2G1 150 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 PSCAO43653 123 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 TSPAN13O95857 204 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 COX6CP09669 75 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 SCGB1C2P0DMR2 95 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 UBE2V1Q13404 147 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 HIGD2BQ4VC39 106 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 UNQ6190/PRO20217Q6UXQ8 127 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 NAA38Q9BRA0 125 aaKnown RBP6.69□□□□□ -1.34
SS18-210ENST00000578700 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
SS18-210ENST00000578700 HMCN2Q8NDA2 5059 aa6.68□□□□□ -1.34
SS18-210ENST00000578700 A0A087WTM6 91 aa6.68□□□□□ -1.34
SS18-210ENST00000578700 K7EP34 96 aa6.67□□□□□ -1.34
SS18-210ENST00000578700 RPL13AP40429 203 aaKnown RBP6.67□□□□□ -1.34
SS18-210ENST00000578700 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
SS18-210ENST00000578700 C15orf56Q8N910 161 aa6.67□□□□□ -1.34
SS18-210ENST00000578700 TRBV20-1A0A075B6N2 111 aa6.66□□□□□ -1.34
SS18-210ENST00000578700 SYCNQ0VAF6 134 aa6.66□□□□□ -1.34
SS18-210ENST00000578700 SOSTDC1Q6X4U4 206 aa6.66□□□□□ -1.34
SS18-210ENST00000578700 LINC00526Q96FQ7 95 aa6.66□□□□□ -1.34
SS18-210ENST00000578700 USP17L23D6RBM5 183 aa6.65□□□□□ -1.34
SS18-210ENST00000578700 C14orf177Q52M58 125 aa6.65□□□□□ -1.34
SS18-210ENST00000578700 C9orf116Q5BN46 136 aaPredicted RBP6.65□□□□□ -1.34
SS18-210ENST00000578700 C10orf25Q5T742 122 aa6.65□□□□□ -1.34
SS18-210ENST00000578700 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.34
SS18-210ENST00000578700 NDUFC2O95298 119 aa6.64□□□□□ -1.35
SS18-210ENST00000578700 OR13C6PQ8NH95 151 aa6.64□□□□□ -1.35
SS18-210ENST00000578700 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
SS18-210ENST00000578700 IGLV5-52A0A0A0MRZ9 124 aa6.63□□□□□ -1.35
SS18-210ENST00000578700 NDUFC2-KCTD14E9PQ53 114 aa6.63□□□□□ -1.35
SS18-210ENST00000578700 EIF4EBP3O60516 100 aaPredicted RBP6.63□□□□□ -1.35
SS18-210ENST00000578700 LRP1Q07954 4544 aaKnown RBP6.63□□□□□ -1.35
SS18-210ENST00000578700 RNF151Q2KHN1 245 aa6.63□□□□□ -1.35
SS18-210ENST00000578700 Q6ZRU5 148 aa6.63□□□□□ -1.35
SS18-210ENST00000578700 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
SS18-210ENST00000578700 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
SS18-210ENST00000578700 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
SS18-210ENST00000578700 FAM30AQ9NZY2 134 aa6.61□□□□□ -1.35
SS18-210ENST00000578700 PKIGQ9Y2B9 76 aa6.61□□□□□ -1.35
SS18-210ENST00000578700 TRIAP1O43715 76 aa6.6□□□□□ -1.35
SS18-210ENST00000578700 TMEM126AQ9H061 195 aa6.6□□□□□ -1.35
SS18-210ENST00000578700 CBY1Q9Y3M2 126 aa6.6□□□□□ -1.35
SS18-210ENST00000578700 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
SS18-210ENST00000578700 F8W1H4 67 aa6.59□□□□□ -1.35
SS18-210ENST00000578700 H3BMG7 143 aa6.59□□□□□ -1.35
SS18-210ENST00000578700 LECT2O14960 151 aa6.59□□□□□ -1.35
SS18-210ENST00000578700 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
SS18-210ENST00000578700 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
SS18-210ENST00000578700 LINC00337Q8N6G1 96 aa6.59□□□□□ -1.35
SS18-210ENST00000578700 TRBV10-2A0A0K0K1G8 114 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 KRTAP29-1A8MX34 341 aaPredicted RBP6.58□□□□□ -1.36
SS18-210ENST00000578700 H0YGX0 51 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 SNCGO76070 127 aa6.58□□□□□ -1.36
SS18-210ENST00000578700 TCL1BO95988 128 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms