RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
PTPRM-207ENST00000578571 ZNF22P17026 224 aaPredicted RBP3.28□□□□□ -1.88
PTPRM-207ENST00000578571 NMUP48645 174 aa3.28□□□□□ -1.88
PTPRM-207ENST00000578571 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
PTPRM-207ENST00000578571 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.89
PTPRM-207ENST00000578571 DYNC2H1Q8NCM8 4307 aaKnown RBP3.27□□□□□ -1.89
PTPRM-207ENST00000578571 ALMS1Q8TCU4 4167 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 TRBV30A0A0K0K1B3 111 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 MYMXA0A1B0GTQ4 84 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 TMEM223A0PJW6 202 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 E9PLD3 99 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 SPINK8P0C7L1 97 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 COX6A2Q02221 97 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 CIRBPQ14011 172 aaKnown RBP3.27□□□□□ -1.89
PTPRM-207ENST00000578571 Q6ZRN7 208 aaPredicted RBP3.27□□□□□ -1.89
PTPRM-207ENST00000578571 Q8N814 137 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 COPS9Q8WXC6 57 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 FAM104AQ969W3 186 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 CARD19Q96LW7 228 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 PMCHL2Q9BQD1 86 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 VAMP8Q9BV40 100 aa3.27□□□□□ -1.89
PTPRM-207ENST00000578571 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.26□□□□□ -1.89
PTPRM-207ENST00000578571 J3QQQ9 107 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 LECT2O14960 151 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 LEPROTO15243 131 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 RTL8CO15255 209 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 CNBPP62633 177 aaKnown RBP3.26□□□□□ -1.89
PTPRM-207ENST00000578571 CXCL6P80162 114 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 JOSD1Q15040 202 aaPredicted RBP3.26□□□□□ -1.89
PTPRM-207ENST00000578571 KRTAP26-1Q6PEX3 210 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 LINC00474Q9P2X8 69 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 TENM2Q9NT68 2774 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 STARD9Q9P2P6 4700 aa3.26□□□□□ -1.89
PTPRM-207ENST00000578571 LOC107984640A0A0U1RRK4 108 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 LRCOL1A6NCL2 159 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 SMIM6P0DI80 62 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 COX17Q14061 63 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 MEIG1Q5JSS6 88 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 SCGB1D4Q6XE38 83 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 MIEN1Q9BRT3 115 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 NDUFA12Q9UI09 145 aa3.25□□□□□ -1.89
PTPRM-207ENST00000578571 ZNF815PA8K554 130 aa3.24□□□□□ -1.89
PTPRM-207ENST00000578571 TMEM238C9JI98 176 aa3.24□□□□□ -1.89
PTPRM-207ENST00000578571 ATOH7Q8N100 152 aa3.24□□□□□ -1.89
PTPRM-207ENST00000578571 C9orf163Q8N9P6 203 aa3.24□□□□□ -1.89
PTPRM-207ENST00000578571 CSMD3Q7Z407 3707 aa3.24□□□□□ -1.89
PTPRM-207ENST00000578571 PLECQ15149 4684 aaKnown RBP3.24□□□□□ -1.89
PTPRM-207ENST00000578571 C16orf90A8MZG2 172 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 LINC00158P58513 81 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 RPL18AQ02543 176 aaKnown RBP3.23□□□□□ -1.89
PTPRM-207ENST00000578571 SPATA45Q537H7 98 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 Q6ZRU5 148 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 Q6ZVH6 145 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 DPH3Q96FX2 82 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 ERG28Q9UKR5 140 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 VPS13DQ5THJ4 4388 aa3.23□□□□□ -1.89
PTPRM-207ENST00000578571 TIMM17BO60830 172 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 TLX1NBP0CAT3 122 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 WFDC2Q14508 124 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 PYY3Q5JQD4 70 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 SLC25A34Q6PIV7 304 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 C2orf82Q6UX34 121 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 UNQ6190/PRO20217Q6UXQ8 127 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 LINC00526Q96FQ7 95 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 ZNF625Q96I27 306 aaPredicted RBP3.22□□□□□ -1.89
PTPRM-207ENST00000578571 CBY1Q9Y3M2 126 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
PTPRM-207ENST00000578571 TSTD3H0UI37 97 aa3.21□□□□□ -1.9
PTPRM-207ENST00000578571 DLEU1O43261 78 aa3.21□□□□□ -1.9
PTPRM-207ENST00000578571 COX8AP10176 69 aa3.21□□□□□ -1.9
PTPRM-207ENST00000578571 PFN2P35080 140 aa3.21□□□□□ -1.9
PTPRM-207ENST00000578571 BOD1L2Q8IYS8 172 aa3.21□□□□□ -1.9
PTPRM-207ENST00000578571 C6orf48Q9UBA6 75 aa3.21□□□□□ -1.9
PTPRM-207ENST00000578571 DNAH6Q9C0G6 4158 aa3.2□□□□□ -1.9
PTPRM-207ENST00000578571 IGKV2-24A0A0C4DH68 120 aa3.2□□□□□ -1.9
PTPRM-207ENST00000578571 A0A0J9YXY3 114 aa3.2□□□□□ -1.9
PTPRM-207ENST00000578571 A0A0U1RRA0 63 aa3.2□□□□□ -1.9
PTPRM-207ENST00000578571 IFITM1P13164 125 aa3.2□□□□□ -1.9
PTPRM-207ENST00000578571 NKAPP1Q8N9T2 125 aa3.2□□□□□ -1.9
PTPRM-207ENST00000578571 UQCR10Q9UDW1 63 aa3.2□□□□□ -1.9
PTPRM-207ENST00000578571 IGKV2D-26A0A0A0MRZ7 120 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 LOC105371267A0A1B0GV96 52 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 SMIM13P0DJ93 91 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 TSPEAR-AS2P59090 65 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 MAJINQ3KP22 176 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 MIR7-3HGQ8N6C7 128 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 C7orf33Q8WU49 177 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 HIST1H4GQ99525 98 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 C12orf57Q99622 126 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 SPANXDQ9BXN6 97 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 SPANXB1Q9NS25 103 aaPredicted RBP3.19□□□□□ -1.9
PTPRM-207ENST00000578571 SPANXCQ9NY87 97 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 HIGD1BQ9P298 99 aa3.19□□□□□ -1.9
PTPRM-207ENST00000578571 SACSQ9NZJ4 4579 aa3.18□□□□□ -1.9
PTPRM-207ENST00000578571 HNRNPA3P51991 378 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms