RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 FAM168BA1KXE4 195 aa8.22□□□□□ -1.09
CTC1-205ENST00000578537 C16orf90A8MZG2 172 aa8.22□□□□□ -1.09
CTC1-205ENST00000578537 SCGB1D4Q6XE38 83 aa8.22□□□□□ -1.09
CTC1-205ENST00000578537 TIMM17BO60830 172 aa8.21□□□□□ -1.1
CTC1-205ENST00000578537 CIRBPQ14011 172 aaKnown RBP8.21□□□□□ -1.1
CTC1-205ENST00000578537 Q6ZSA8 131 aa8.21□□□□□ -1.1
CTC1-205ENST00000578537 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
CTC1-205ENST00000578537 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.1
CTC1-205ENST00000578537 COX17Q14061 63 aa8.2□□□□□ -1.1
CTC1-205ENST00000578537 SERTAD4-AS1Q5TG53 156 aa8.2□□□□□ -1.1
CTC1-205ENST00000578537 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
CTC1-205ENST00000578537 SPANXDQ9BXN6 97 aa8.19□□□□□ -1.1
CTC1-205ENST00000578537 SPANXCQ9NY87 97 aa8.19□□□□□ -1.1
CTC1-205ENST00000578537 UQCR10Q9UDW1 63 aa8.19□□□□□ -1.1
CTC1-205ENST00000578537 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
CTC1-205ENST00000578537 TMEM238C9JI98 176 aa8.17□□□□□ -1.1
CTC1-205ENST00000578537 LINC00308Q8TCZ7 52 aa8.17□□□□□ -1.1
CTC1-205ENST00000578537 HIGD1BQ9P298 99 aa8.17□□□□□ -1.1
CTC1-205ENST00000578537 VPREB1P12018 145 aa8.16□□□□□ -1.1
CTC1-205ENST00000578537 SCXQ7RTU7 201 aa8.16□□□□□ -1.1
CTC1-205ENST00000578537 FAM19A5Q7Z5A7 132 aaPredicted RBP8.16□□□□□ -1.1
CTC1-205ENST00000578537 MIEN1Q9BRT3 115 aa8.16□□□□□ -1.1
CTC1-205ENST00000578537 A0A087WYN8 130 aa8.15□□□□□ -1.1
CTC1-205ENST00000578537 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
CTC1-205ENST00000578537 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.1
CTC1-205ENST00000578537 MUSTN1Q8IVN3 82 aa8.15□□□□□ -1.1
CTC1-205ENST00000578537 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
CTC1-205ENST00000578537 APOBP04114 4563 aaKnown RBP8.14□□□□□ -1.11
CTC1-205ENST00000578537 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
CTC1-205ENST00000578537 HNRNPA3P51991 378 aaKnown RBP8.14□□□□□ -1.11
CTC1-205ENST00000578537 KRTAP11-1Q8IUC1 163 aa8.14□□□□□ -1.11
CTC1-205ENST00000578537 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
CTC1-205ENST00000578537 CDK2AP2O75956 126 aa8.13□□□□□ -1.11
CTC1-205ENST00000578537 XGP55808 180 aa8.13□□□□□ -1.11
CTC1-205ENST00000578537 CIRBP-AS1Q8TBR5 109 aa8.13□□□□□ -1.11
CTC1-205ENST00000578537 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 NCR3O14931 201 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 FXYD2P54710 66 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
CTC1-205ENST00000578537 HIST1H4GQ99525 98 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
CTC1-205ENST00000578537 IGLV5-37A0A075B6J1 123 aa8.11□□□□□ -1.11
CTC1-205ENST00000578537 TSTD3H0UI37 97 aa8.11□□□□□ -1.11
CTC1-205ENST00000578537 SRSF9Q13242 221 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTC1-205ENST00000578537 A4D1N5 150 aa8.1□□□□□ -1.11
CTC1-205ENST00000578537 M0QXV9 152 aa8.1□□□□□ -1.11
CTC1-205ENST00000578537 CTAG1AP78358 180 aa8.1□□□□□ -1.11
CTC1-205ENST00000578537 Q8N1X5 172 aa8.1□□□□□ -1.11
CTC1-205ENST00000578537 GAGE10A6NGK3 116 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 IFITM1P13164 125 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 HSD52Q0P140 79 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 Q6ZVH6 145 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 CEND1Q8N111 149 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
CTC1-205ENST00000578537 DDTP30046 118 aa8.08□□□□□ -1.12
CTC1-205ENST00000578537 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
CTC1-205ENST00000578537 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
CTC1-205ENST00000578537 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
CTC1-205ENST00000578537 NDUFC2O95298 119 aa8.07□□□□□ -1.12
CTC1-205ENST00000578537 TAL2Q16559 108 aa8.07□□□□□ -1.12
CTC1-205ENST00000578537 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
CTC1-205ENST00000578537 LINC00167Q96N53 147 aa8.06□□□□□ -1.12
CTC1-205ENST00000578537 TRBV10-3A0A0K0K1G6 114 aa8.05□□□□□ -1.12
CTC1-205ENST00000578537 HINT1P49773 126 aaPredicted RBP8.05□□□□□ -1.12
CTC1-205ENST00000578537 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
CTC1-205ENST00000578537 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
CTC1-205ENST00000578537 RPL37AP8A6NKH3 93 aa8.04□□□□□ -1.12
CTC1-205ENST00000578537 PCP4L1A6NKN8 68 aa8.04□□□□□ -1.12
CTC1-205ENST00000578537 K7ERJ3 54 aa8.04□□□□□ -1.12
CTC1-205ENST00000578537 NKAPP1Q8N9T2 125 aa8.04□□□□□ -1.12
CTC1-205ENST00000578537 M0R378 163 aa8.03□□□□□ -1.12
CTC1-205ENST00000578537 SMR3BP02814 79 aaPredicted RBP8.03□□□□□ -1.12
CTC1-205ENST00000578537 CFC1BP0CG36 223 aa8.03□□□□□ -1.12
CTC1-205ENST00000578537 CFC1P0CG37 223 aa8.03□□□□□ -1.12
CTC1-205ENST00000578537 RPL24P83731 157 aaKnown RBP8.03□□□□□ -1.12
CTC1-205ENST00000578537 TRBV10-2A0A0K0K1G8 114 aa8.02□□□□□ -1.13
CTC1-205ENST00000578537 IGLV6-57P01721 117 aa8.02□□□□□ -1.13
CTC1-205ENST00000578537 IGLV1-50A0A075B6I6 118 aa8.01□□□□□ -1.13
CTC1-205ENST00000578537 NHP2Q9NX24 153 aaKnown RBP8.01□□□□□ -1.13
CTC1-205ENST00000578537 A0A0B4J2C4 111 aa7.99□□□□□ -1.13
CTC1-205ENST00000578537 A0A1B0GWB2 263 aa7.99□□□□□ -1.13
CTC1-205ENST00000578537 RPL13AP40429 203 aaKnown RBP7.99□□□□□ -1.13
CTC1-205ENST00000578537 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
CTC1-205ENST00000578537 LINC00528Q8N1L1 170 aa7.99□□□□□ -1.13
CTC1-205ENST00000578537 COPS9Q8WXC6 57 aa7.99□□□□□ -1.13
CTC1-205ENST00000578537 UBE2BP63146 152 aa7.98□□□□□ -1.13
CTC1-205ENST00000578537 OR13C6PQ8NH95 151 aa7.98□□□□□ -1.13
CTC1-205ENST00000578537 SNHG12Q9BXW3 62 aa7.98□□□□□ -1.13
CTC1-205ENST00000578537 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
CTC1-205ENST00000578537 A6NDN8 102 aa7.97□□□□□ -1.13
CTC1-205ENST00000578537 BATFQ16520 125 aa7.97□□□□□ -1.13
CTC1-205ENST00000578537 MYCBP2O75592 4640 aa7.97□□□□□ -1.13
CTC1-205ENST00000578537 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.14
CTC1-205ENST00000578537 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
CTC1-205ENST00000578537 M0R143 59 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms