RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 COPS9Q8WXC6 57 aa8.49□□□□□ -1.05
CTC1-203ENST00000578240 NDUFC2-KCTD14E9PQ53 114 aa8.48□□□□□ -1.05
CTC1-203ENST00000578240 RNF151Q2KHN1 245 aa8.48□□□□□ -1.05
CTC1-203ENST00000578240 RAB37Q96AX2 223 aa8.48□□□□□ -1.05
CTC1-203ENST00000578240 BIRC6Q9NR09 4857 aa8.48□□□□□ -1.05
CTC1-203ENST00000578240 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
CTC1-203ENST00000578240 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.47□□□□□ -1.05
CTC1-203ENST00000578240 A0A087WTM6 91 aa8.47□□□□□ -1.05
CTC1-203ENST00000578240 TLX1NBP0CAT3 122 aa8.47□□□□□ -1.05
CTC1-203ENST00000578240 C1orf134Q5TEV5 83 aa8.47□□□□□ -1.05
CTC1-203ENST00000578240 XAGE1AQ9HD64 81 aa8.47□□□□□ -1.05
CTC1-203ENST00000578240 PKD1P98161 4303 aa8.47□□□□□ -1.05
CTC1-203ENST00000578240 NAA38Q9BRA0 125 aaKnown RBP8.46□□□□□ -1.05
CTC1-203ENST00000578240 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.06
CTC1-203ENST00000578240 RTL8CO15255 209 aa8.46□□□□□ -1.06
CTC1-203ENST00000578240 C14orf177Q52M58 125 aa8.46□□□□□ -1.06
CTC1-203ENST00000578240 C9orf129Q5T035 196 aaKnown RBP8.46□□□□□ -1.06
CTC1-203ENST00000578240 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
CTC1-203ENST00000578240 Q8N814 137 aa8.46□□□□□ -1.06
CTC1-203ENST00000578240 A0A1B0GV90 55 aa8.45□□□□□ -1.06
CTC1-203ENST00000578240 TSPAN13O95857 204 aa8.45□□□□□ -1.06
CTC1-203ENST00000578240 GAGE2EQ4V326 116 aa8.43□□□□□ -1.06
CTC1-203ENST00000578240 PGPEP1Q9NXJ5 209 aa8.43□□□□□ -1.06
CTC1-203ENST00000578240 GAGE2DQ9UEU5 116 aa8.43□□□□□ -1.06
CTC1-203ENST00000578240 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
CTC1-203ENST00000578240 C9orf118A6NHY6 69 aa8.43□□□□□ -1.06
CTC1-203ENST00000578240 PRR3P79522 188 aaKnown RBP8.43□□□□□ -1.06
CTC1-203ENST00000578240 RPL18AQ02543 176 aaKnown RBP8.43□□□□□ -1.06
CTC1-203ENST00000578240 TNP2Q05952 138 aa8.43□□□□□ -1.06
CTC1-203ENST00000578240 NDUFC2O95298 119 aa8.42□□□□□ -1.06
CTC1-203ENST00000578240 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
CTC1-203ENST00000578240 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
CTC1-203ENST00000578240 H3BUT2 72 aa8.41□□□□□ -1.06
CTC1-203ENST00000578240 VPREB1P12018 145 aa8.41□□□□□ -1.06
CTC1-203ENST00000578240 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
CTC1-203ENST00000578240 KRTAP7-1Q8IUC3 87 aa8.41□□□□□ -1.06
CTC1-203ENST00000578240 A0A096LNI7 61 aa8.4□□□□□ -1.06
CTC1-203ENST00000578240 LOC107984640A0A0U1RRK4 108 aa8.4□□□□□ -1.06
CTC1-203ENST00000578240 NCR3O14931 201 aa8.4□□□□□ -1.06
CTC1-203ENST00000578240 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.06
CTC1-203ENST00000578240 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
CTC1-203ENST00000578240 SERTAD4-AS1Q5TG53 156 aa8.39□□□□□ -1.07
CTC1-203ENST00000578240 H7C2G1 150 aa8.38□□□□□ -1.07
CTC1-203ENST00000578240 PKHD1P08F94 4074 aa8.38□□□□□ -1.07
CTC1-203ENST00000578240 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
CTC1-203ENST00000578240 GAGE2BQ13066 116 aa8.37□□□□□ -1.07
CTC1-203ENST00000578240 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
CTC1-203ENST00000578240 C16orf90A8MZG2 172 aa8.37□□□□□ -1.07
CTC1-203ENST00000578240 PANO1I0J062 215 aa8.37□□□□□ -1.07
CTC1-203ENST00000578240 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
CTC1-203ENST00000578240 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
CTC1-203ENST00000578240 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
CTC1-203ENST00000578240 TRIAP1O43715 76 aa8.36□□□□□ -1.07
CTC1-203ENST00000578240 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
CTC1-203ENST00000578240 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
CTC1-203ENST00000578240 PKIGQ9Y2B9 76 aa8.35□□□□□ -1.07
CTC1-203ENST00000578240 IGKV2-24A0A0C4DH68 120 aa8.34□□□□□ -1.07
CTC1-203ENST00000578240 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
CTC1-203ENST00000578240 LINC00336Q6ZUF6 198 aa8.34□□□□□ -1.07
CTC1-203ENST00000578240 IGLV5-37A0A075B6J1 123 aa8.34□□□□□ -1.08
CTC1-203ENST00000578240 IGLV6-57P01721 117 aa8.34□□□□□ -1.08
CTC1-203ENST00000578240 Q1RN00 199 aa8.34□□□□□ -1.08
CTC1-203ENST00000578240 SMIM11BQ8TCY0 68 aa8.34□□□□□ -1.08
CTC1-203ENST00000578240 TRBV10-3A0A0K0K1G6 114 aa8.33□□□□□ -1.08
CTC1-203ENST00000578240 OR13C6PQ8NH95 151 aa8.32□□□□□ -1.08
CTC1-203ENST00000578240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.32□□□□□ -1.08
CTC1-203ENST00000578240 A0A1W2PNN7 141 aa8.31□□□□□ -1.08
CTC1-203ENST00000578240 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
CTC1-203ENST00000578240 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
CTC1-203ENST00000578240 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
CTC1-203ENST00000578240 IGLV5-52A0A0A0MRZ9 124 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 FABP2P12104 132 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 TMEM126AQ9H061 195 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 K7EP34 96 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 M0R378 163 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 VAMP3Q15836 100 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 SPACA4Q8TDM5 124 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 SPCS1Q9Y6A9 102 aa8.3□□□□□ -1.08
CTC1-203ENST00000578240 TCL1BO95988 128 aa8.29□□□□□ -1.08
CTC1-203ENST00000578240 PSMB2P49721 201 aa8.29□□□□□ -1.08
CTC1-203ENST00000578240 S100A7L2Q5SY68 101 aa8.28□□□□□ -1.08
CTC1-203ENST00000578240 GAGE10A6NGK3 116 aa8.27□□□□□ -1.08
CTC1-203ENST00000578240 NKAPP1Q8N9T2 125 aa8.27□□□□□ -1.08
CTC1-203ENST00000578240 CLEC2BQ92478 149 aa8.27□□□□□ -1.08
CTC1-203ENST00000578240 FAM218AQ96MZ4 157 aa8.27□□□□□ -1.08
CTC1-203ENST00000578240 C22orf24Q9Y442 160 aa8.27□□□□□ -1.08
CTC1-203ENST00000578240 EPM2AB3EWF7 344 aa8.27□□□□□ -1.09
CTC1-203ENST00000578240 M0QXV9 152 aa8.27□□□□□ -1.09
CTC1-203ENST00000578240 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
CTC1-203ENST00000578240 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
CTC1-203ENST00000578240 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
CTC1-203ENST00000578240 DYNC1H1Q14204 4646 aaKnown RBP8.26□□□□□ -1.09
CTC1-203ENST00000578240 C6orf99Q4VX62 202 aa8.25□□□□□ -1.09
CTC1-203ENST00000578240 KRTAP11-1Q8IUC1 163 aa8.25□□□□□ -1.09
CTC1-203ENST00000578240 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
CTC1-203ENST00000578240 IGLV1-50A0A075B6I6 118 aa8.24□□□□□ -1.09
CTC1-203ENST00000578240 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
CTC1-203ENST00000578240 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
CTC1-203ENST00000578240 H3BMG7 143 aa8.24□□□□□ -1.09
CTC1-203ENST00000578240 UBE2V1Q13404 147 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 983.1 ms