RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 SLC25A34Q6PIV7 304 aa7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 SPANXB1Q9NS25 103 aaPredicted RBP7.09□□□□□ -1.27
CDK5RAP3-204ENST00000577664 LRP1Q07954 4544 aaKnown RBP7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 FUSP35637 526 aaKnown RBP eCLIP7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 MEIG1Q5JSS6 88 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 C12orf57Q99622 126 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LRP2P98164 4655 aa7.08□□□□□ -1.28
CDK5RAP3-204ENST00000577664 A0A096LNI7 61 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 PFN2P35080 140 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LINC00158P58513 81 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LINC01620Q4KN68 170 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SND1-IT1Q9HBX3 110 aa7.07□□□□□ -1.28
CDK5RAP3-204ENST00000577664 TMEM238C9JI98 176 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 SCGB1D4Q6XE38 83 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 C2orf91Q6ZV80 131 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 UQCR10Q9UDW1 63 aa7.06□□□□□ -1.28
CDK5RAP3-204ENST00000577664 IFITM1P13164 125 aa7.05□□□□□ -1.28
CDK5RAP3-204ENST00000577664 MIEN1Q9BRT3 115 aa7.05□□□□□ -1.28
CDK5RAP3-204ENST00000577664 TP73-AS1Q9UF72 201 aa7.05□□□□□ -1.28
CDK5RAP3-204ENST00000577664 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 PANO1I0J062 215 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 NDUFC2O95298 119 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 GAGE2BQ13066 116 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 GAGE2EQ4V326 116 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 COPS9Q8WXC6 57 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 PLAC8Q9NZF1 115 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 GAGE2DQ9UEU5 116 aa7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP3-204ENST00000577664 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 TAL2Q16559 108 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
CDK5RAP3-204ENST00000577664 A0A0U1RRA0 63 aa7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 XAGE1AQ9HD64 81 aa7.02□□□□□ -1.29
CDK5RAP3-204ENST00000577664 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 A0A087WYN8 130 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 VPREB1P12018 145 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 RPL24P83731 157 aaKnown RBP7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 DAND5Q8N907 189 aa7.01□□□□□ -1.29
CDK5RAP3-204ENST00000577664 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 TSTD3H0UI37 97 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SRSF9Q13242 221 aaKnown RBP eCLIP7□□□□□ -1.293e-13■■■□□ 16.3
CDK5RAP3-204ENST00000577664 MUSTN1Q8IVN3 82 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
CDK5RAP3-204ENST00000577664 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 Q8NDZ9 215 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 PRO1933Q9H354 126 aa6.99□□□□□ -1.29
CDK5RAP3-204ENST00000577664 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
CDK5RAP3-204ENST00000577664 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
CDK5RAP3-204ENST00000577664 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
CDK5RAP3-204ENST00000577664 SCXQ7RTU7 201 aa6.97□□□□□ -1.29
CDK5RAP3-204ENST00000577664 CEND1Q8N111 149 aa6.97□□□□□ -1.29
CDK5RAP3-204ENST00000577664 DPH3Q96FX2 82 aa6.97□□□□□ -1.29
CDK5RAP3-204ENST00000577664 M0R378 163 aa6.96□□□□□ -1.3
CDK5RAP3-204ENST00000577664 HSD52Q0P140 79 aa6.96□□□□□ -1.3
CDK5RAP3-204ENST00000577664 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 OXTP01178 125 aa6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A4D1N5 150 aa6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 NPC2P61916 151 aa6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 PRR3P79522 188 aaKnown RBP6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 M0QXV9 152 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 IGLV6-57P01721 117 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 DDTP30046 118 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 FAM19A5Q7Z5A7 132 aaPredicted RBP6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 NKAPP1Q8N9T2 125 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 C7orf33Q8WU49 177 aa6.93□□□□□ -1.3
CDK5RAP3-204ENST00000577664 CTAG1AP78358 180 aa6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 KCNQ1DNQ9H478 68 aa6.92□□□□□ -1.3
CDK5RAP3-204ENST00000577664 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A0A1B0GWB2 263 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 A6NJY4 79 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 CFC1BP0CG36 223 aa6.91□□□□□ -1.3
CDK5RAP3-204ENST00000577664 CFC1P0CG37 223 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms