RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
CTDNEP1-212ENST00000576613 A0A1B0GVG6 124 aa6.55□□□□□ -1.36
CTDNEP1-212ENST00000576613 KIAA1644Q3SXP7 199 aa6.55□□□□□ -1.36
CTDNEP1-212ENST00000576613 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
CTDNEP1-212ENST00000576613 FAM19A2Q8N3H0 131 aa6.54□□□□□ -1.36
CTDNEP1-212ENST00000576613 ZNF625Q96I27 306 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-212ENST00000576613 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
CTDNEP1-212ENST00000576613 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
CTDNEP1-212ENST00000576613 Q8NDZ9 215 aa6.53□□□□□ -1.36
CTDNEP1-212ENST00000576613 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
CTDNEP1-212ENST00000576613 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
CTDNEP1-212ENST00000576613 PRYO14603 147 aa6.51□□□□□ -1.37
CTDNEP1-212ENST00000576613 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-212ENST00000576613 NDUFA6P56556 154 aa6.51□□□□□ -1.37
CTDNEP1-212ENST00000576613 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-212ENST00000576613 TRAV9-1A0A075B6T8 112 aa6.5□□□□□ -1.37
CTDNEP1-212ENST00000576613 LINC00158P58513 81 aa6.5□□□□□ -1.37
CTDNEP1-212ENST00000576613 ETDCA0A1B0GVM5 59 aa6.49□□□□□ -1.37
CTDNEP1-212ENST00000576613 Q8N377 158 aa6.49□□□□□ -1.37
CTDNEP1-212ENST00000576613 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
CTDNEP1-212ENST00000576613 SLC25A20O43772 301 aa6.48□□□□□ -1.37
CTDNEP1-212ENST00000576613 LINC00483Q53H64 154 aa6.48□□□□□ -1.37
CTDNEP1-212ENST00000576613 XP32Q5T750 250 aa6.48□□□□□ -1.37
CTDNEP1-212ENST00000576613 SPRR1AP35321 89 aa6.47□□□□□ -1.37
CTDNEP1-212ENST00000576613 S100A12P80511 92 aa6.47□□□□□ -1.37
CTDNEP1-212ENST00000576613 MOBPQ13875 183 aa6.47□□□□□ -1.37
CTDNEP1-212ENST00000576613 TMEM170BQ5T4T1 132 aa6.47□□□□□ -1.37
CTDNEP1-212ENST00000576613 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
CTDNEP1-212ENST00000576613 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 A0A0U1RRA0 63 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 ATP6V1G1O75348 118 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 CFC1BP0CG36 223 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 S100PP25815 95 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 GAGE2AQ6NT46 116 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 SSBP3-AS1Q7Z2R9 100 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 BOD1L2Q8IYS8 172 aa6.46□□□□□ -1.38
CTDNEP1-212ENST00000576613 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
CTDNEP1-212ENST00000576613 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
CTDNEP1-212ENST00000576613 NCR3O14931 201 aa6.45□□□□□ -1.38
CTDNEP1-212ENST00000576613 COX19Q49B96 90 aa6.45□□□□□ -1.38
CTDNEP1-212ENST00000576613 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
CTDNEP1-212ENST00000576613 A0A096LNJ9 63 aa6.43□□□□□ -1.38
CTDNEP1-212ENST00000576613 HBDP02042 147 aa6.43□□□□□ -1.38
CTDNEP1-212ENST00000576613 FABP9Q0Z7S8 132 aa6.43□□□□□ -1.38
CTDNEP1-212ENST00000576613 BAGE3Q86Y29 109 aa6.43□□□□□ -1.38
CTDNEP1-212ENST00000576613 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
CTDNEP1-212ENST00000576613 SMIM13P0DJ93 91 aa6.42□□□□□ -1.38
CTDNEP1-212ENST00000576613 MEIG1Q5JSS6 88 aa6.42□□□□□ -1.38
CTDNEP1-212ENST00000576613 B5MCH6 92 aa6.41□□□□□ -1.38
CTDNEP1-212ENST00000576613 MT1HP80294 61 aa6.41□□□□□ -1.38
CTDNEP1-212ENST00000576613 MIR7-3HGQ8N6C7 128 aa6.41□□□□□ -1.38
CTDNEP1-212ENST00000576613 LINC00587B1AMM8 73 aa6.4□□□□□ -1.38
CTDNEP1-212ENST00000576613 LINC00614P0C842 121 aa6.4□□□□□ -1.38
CTDNEP1-212ENST00000576613 HERV-K104P63124 156 aa6.4□□□□□ -1.38
CTDNEP1-212ENST00000576613 SEC11CQ9BY50 192 aa6.4□□□□□ -1.38
CTDNEP1-212ENST00000576613 CHTOPQ9Y3Y2 248 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-212ENST00000576613 TMEM223A0PJW6 202 aa6.39□□□□□ -1.39
CTDNEP1-212ENST00000576613 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
CTDNEP1-212ENST00000576613 PMCHL1Q16048 86 aa6.39□□□□□ -1.39
CTDNEP1-212ENST00000576613 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
CTDNEP1-212ENST00000576613 C9orf153Q5TBE3 101 aa6.39□□□□□ -1.39
CTDNEP1-212ENST00000576613 MAP1LC3CQ9BXW4 147 aa6.39□□□□□ -1.39
CTDNEP1-212ENST00000576613 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
CTDNEP1-212ENST00000576613 Q6ZRX8 168 aa6.38□□□□□ -1.39
CTDNEP1-212ENST00000576613 C18orf32Q8TCD1 76 aa6.38□□□□□ -1.39
CTDNEP1-212ENST00000576613 URB1-AS1Q96HZ7 61 aa6.38□□□□□ -1.39
CTDNEP1-212ENST00000576613 DDTP30046 118 aa6.37□□□□□ -1.39
CTDNEP1-212ENST00000576613 PCOTHQ58A44 107 aa6.37□□□□□ -1.39
CTDNEP1-212ENST00000576613 Q9BRP9 147 aa6.37□□□□□ -1.39
CTDNEP1-212ENST00000576613 TMEM218A2RU14 115 aa6.36□□□□□ -1.39
CTDNEP1-212ENST00000576613 UQCC3Q6UW78 93 aa6.36□□□□□ -1.39
CTDNEP1-212ENST00000576613 TRBV10-2A0A0K0K1G8 114 aa6.35□□□□□ -1.39
CTDNEP1-212ENST00000576613 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-212ENST00000576613 JOSD1Q15040 202 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-212ENST00000576613 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
CTDNEP1-212ENST00000576613 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
CTDNEP1-212ENST00000576613 MYMXA0A1B0GTQ4 84 aa6.34□□□□□ -1.39
CTDNEP1-212ENST00000576613 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-212ENST00000576613 CLLU1Q5K131 121 aa6.34□□□□□ -1.39
CTDNEP1-212ENST00000576613 M0R2T5 61 aa6.33□□□□□ -1.4
CTDNEP1-212ENST00000576613 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
CTDNEP1-212ENST00000576613 MIEN1Q9BRT3 115 aa6.33□□□□□ -1.4
CTDNEP1-212ENST00000576613 SPANXB1Q9NS25 103 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-212ENST00000576613 TRAPPC1Q9Y5R8 145 aa6.33□□□□□ -1.4
CTDNEP1-212ENST00000576613 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
CTDNEP1-212ENST00000576613 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
CTDNEP1-212ENST00000576613 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
CTDNEP1-212ENST00000576613 IFI27L1Q96BM0 104 aa6.32□□□□□ -1.4
CTDNEP1-212ENST00000576613 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
CTDNEP1-212ENST00000576613 C5orf52A6NGY3 159 aa6.31□□□□□ -1.4
CTDNEP1-212ENST00000576613 RHEBQ15382 184 aa6.31□□□□□ -1.4
CTDNEP1-212ENST00000576613 IGLV6-57P01721 117 aa6.3□□□□□ -1.4
CTDNEP1-212ENST00000576613 IFITM2Q01629 132 aa6.3□□□□□ -1.4
CTDNEP1-212ENST00000576613 RPS10P5Q9NQ39 176 aa6.3□□□□□ -1.4
CTDNEP1-212ENST00000576613 NDUFC2O95298 119 aa6.29□□□□□ -1.4
CTDNEP1-212ENST00000576613 SLC25A34Q6PIV7 304 aa6.29□□□□□ -1.4
CTDNEP1-212ENST00000576613 COMMD7Q86VX2 200 aa6.29□□□□□ -1.4
CTDNEP1-212ENST00000576613 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
CTDNEP1-212ENST00000576613 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
CTDNEP1-212ENST00000576613 HINT1P49773 126 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms