RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
LITAF-218ENST00000576036 ABCA13Q86UQ4 5058 aa9.73□□□□□ -0.85
LITAF-218ENST00000576036 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
LITAF-218ENST00000576036 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
LITAF-218ENST00000576036 M0QXV9 152 aa9.72□□□□□ -0.85
LITAF-218ENST00000576036 VPREB1P12018 145 aa9.72□□□□□ -0.85
LITAF-218ENST00000576036 LITAFQ99732 161 aa9.72□□□□□ -0.85
LITAF-218ENST00000576036 SCGB1D1O95968 90 aa9.71□□□□□ -0.86
LITAF-218ENST00000576036 RPL37AP61513 92 aaKnown RBP9.71□□□□□ -0.86
LITAF-218ENST00000576036 ADAMTSL4-AS1Q5T5F5 129 aa9.71□□□□□ -0.86
LITAF-218ENST00000576036 PCP2Q8IVA1 136 aa9.71□□□□□ -0.86
LITAF-218ENST00000576036 DAND5Q8N907 189 aa9.71□□□□□ -0.86
LITAF-218ENST00000576036 C22orf24Q9Y442 160 aa9.71□□□□□ -0.86
LITAF-218ENST00000576036 ZNF815PA8K554 130 aa9.7□□□□□ -0.86
LITAF-218ENST00000576036 EIF4EBP3O60516 100 aaPredicted RBP9.7□□□□□ -0.86
LITAF-218ENST00000576036 HNRNPA3P51991 378 aaKnown RBP9.7□□□□□ -0.86
LITAF-218ENST00000576036 C7orf33Q8WU49 177 aa9.7□□□□□ -0.86
LITAF-218ENST00000576036 SRRM2Q9UQ35 2752 aaKnown RBP9.7□□□□□ -0.86
LITAF-218ENST00000576036 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
LITAF-218ENST00000576036 JOSD1Q15040 202 aaPredicted RBP9.69□□□□□ -0.86
LITAF-218ENST00000576036 TP73-AS1Q9UF72 201 aa9.69□□□□□ -0.86
LITAF-218ENST00000576036 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
LITAF-218ENST00000576036 PLA2G1BP04054 148 aaKnown RBP9.68□□□□□ -0.86
LITAF-218ENST00000576036 SOSTDC1Q6X4U4 206 aa9.68□□□□□ -0.86
LITAF-218ENST00000576036 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
LITAF-218ENST00000576036 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
LITAF-218ENST00000576036 PSORS1C2Q9UIG4 136 aa9.67□□□□□ -0.86
LITAF-218ENST00000576036 TIMM17BO60830 172 aa9.66□□□□□ -0.86
LITAF-218ENST00000576036 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
LITAF-218ENST00000576036 LINC00167Q96N53 147 aa9.66□□□□□ -0.86
LITAF-218ENST00000576036 PYY3Q5JQD4 70 aa9.65□□□□□ -0.86
LITAF-218ENST00000576036 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.87
LITAF-218ENST00000576036 GAGE10A6NGK3 116 aa9.64□□□□□ -0.87
LITAF-218ENST00000576036 BOD1L2Q8IYS8 172 aa9.63□□□□□ -0.87
LITAF-218ENST00000576036 HSBP1L1C9JCN9 74 aa9.62□□□□□ -0.87
LITAF-218ENST00000576036 NPC2P61916 151 aa9.62□□□□□ -0.87
LITAF-218ENST00000576036 NKAPP1Q8N9T2 125 aa9.62□□□□□ -0.87
LITAF-218ENST00000576036 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
LITAF-218ENST00000576036 INAFM2P0DMQ5 153 aa9.61□□□□□ -0.87
LITAF-218ENST00000576036 UBE2BP63146 152 aa9.61□□□□□ -0.87
LITAF-218ENST00000576036 RPL24P83731 157 aaKnown RBP9.61□□□□□ -0.87
LITAF-218ENST00000576036 LBHQ53QV2 105 aaPredicted RBP9.61□□□□□ -0.87
LITAF-218ENST00000576036 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
LITAF-218ENST00000576036 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
LITAF-218ENST00000576036 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
LITAF-218ENST00000576036 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
LITAF-218ENST00000576036 NCR3O14931 201 aa9.59□□□□□ -0.87
LITAF-218ENST00000576036 COX8AP10176 69 aa9.59□□□□□ -0.87
LITAF-218ENST00000576036 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
LITAF-218ENST00000576036 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
LITAF-218ENST00000576036 PAM16Q9Y3D7 125 aa9.59□□□□□ -0.87
LITAF-218ENST00000576036 M0R378 163 aa9.58□□□□□ -0.88
LITAF-218ENST00000576036 SPATA45Q537H7 98 aa9.58□□□□□ -0.88
LITAF-218ENST00000576036 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
LITAF-218ENST00000576036 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
LITAF-218ENST00000576036 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
LITAF-218ENST00000576036 VAMP8Q9BV40 100 aa9.57□□□□□ -0.88
LITAF-218ENST00000576036 TMEM238C9JI98 176 aa9.56□□□□□ -0.88
LITAF-218ENST00000576036 NDUFC2O95298 119 aa9.56□□□□□ -0.88
LITAF-218ENST00000576036 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
LITAF-218ENST00000576036 DLEU1O43261 78 aa9.55□□□□□ -0.88
LITAF-218ENST00000576036 C14orf144Q96I85 54 aa9.55□□□□□ -0.88
LITAF-218ENST00000576036 MIEN1Q9BRT3 115 aa9.55□□□□□ -0.88
LITAF-218ENST00000576036 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
LITAF-218ENST00000576036 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
LITAF-218ENST00000576036 TRBV10-3A0A0K0K1G6 114 aa9.53□□□□□ -0.88
LITAF-218ENST00000576036 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
LITAF-218ENST00000576036 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
LITAF-218ENST00000576036 FAT3Q8TDW7 4589 aa9.53□□□□□ -0.88
LITAF-218ENST00000576036 MYCBP2O75592 4640 aa9.52□□□□□ -0.89
LITAF-218ENST00000576036 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
LITAF-218ENST00000576036 BCE1O60756 84 aa9.52□□□□□ -0.89
LITAF-218ENST00000576036 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
LITAF-218ENST00000576036 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.89
LITAF-218ENST00000576036 TMEM126AQ9H061 195 aa9.52□□□□□ -0.89
LITAF-218ENST00000576036 LOC105371267A0A1B0GV96 52 aa9.51□□□□□ -0.89
LITAF-218ENST00000576036 IGLV6-57P01721 117 aa9.51□□□□□ -0.89
LITAF-218ENST00000576036 IFITM1P13164 125 aa9.51□□□□□ -0.89
LITAF-218ENST00000576036 Q6ZVH6 145 aa9.51□□□□□ -0.89
LITAF-218ENST00000576036 REG3GQ6UW15 175 aa9.5□□□□□ -0.89
LITAF-218ENST00000576036 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
LITAF-218ENST00000576036 KCNQ1DNQ9H478 68 aa9.5□□□□□ -0.89
LITAF-218ENST00000576036 KRTAP4-16G5E9R7 235 aaPredicted RBP9.49□□□□□ -0.89
LITAF-218ENST00000576036 SPRR1AP35321 89 aa9.49□□□□□ -0.89
LITAF-218ENST00000576036 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
LITAF-218ENST00000576036 PRYO14603 147 aa9.48□□□□□ -0.89
LITAF-218ENST00000576036 DDTP30046 118 aa9.48□□□□□ -0.89
LITAF-218ENST00000576036 SLC25A34Q6PIV7 304 aa9.48□□□□□ -0.89
LITAF-218ENST00000576036 ZNF861PO60384 105 aa9.47□□□□□ -0.89
LITAF-218ENST00000576036 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
LITAF-218ENST00000576036 H0Y9J4 135 aa9.45□□□□□ -0.9
LITAF-218ENST00000576036 PRLHP81277 87 aa9.45□□□□□ -0.9
LITAF-218ENST00000576036 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
LITAF-218ENST00000576036 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
LITAF-218ENST00000576036 A4D1N5 150 aa9.43□□□□□ -0.9
LITAF-218ENST00000576036 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
LITAF-218ENST00000576036 S100A7L2Q5SY68 101 aa9.43□□□□□ -0.9
LITAF-218ENST00000576036 COPS9Q8WXC6 57 aa9.43□□□□□ -0.9
LITAF-218ENST00000576036 DIRC1Q969H9 104 aa9.43□□□□□ -0.9
LITAF-218ENST00000576036 KRTAP1-4P0C5Y4 121 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms