RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LCE4AQ5TA78 99 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 C14orf144Q96I85 54 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 C2orf48Q96LS8 159 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 NDUFA12Q9UI09 145 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 PKIGQ9Y2B9 76 aa8.42□□□□□ -1.06
RPAIN-216ENST00000575599 COX8AP10176 69 aa8.41□□□□□ -1.06
RPAIN-216ENST00000575599 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
RPAIN-216ENST00000575599 SLC25A34Q6PIV7 304 aa8.41□□□□□ -1.06
RPAIN-216ENST00000575599 TSTD3H0UI37 97 aa8.4□□□□□ -1.06
RPAIN-216ENST00000575599 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
RPAIN-216ENST00000575599 SCGB1D4Q6XE38 83 aa8.4□□□□□ -1.06
RPAIN-216ENST00000575599 PCP2Q8IVA1 136 aa8.4□□□□□ -1.06
RPAIN-216ENST00000575599 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
RPAIN-216ENST00000575599 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
RPAIN-216ENST00000575599 NDUFA1O15239 70 aa8.39□□□□□ -1.07
RPAIN-216ENST00000575599 HERV-K104P63124 156 aa8.39□□□□□ -1.07
RPAIN-216ENST00000575599 GAGE2BQ13066 116 aa8.39□□□□□ -1.07
RPAIN-216ENST00000575599 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
RPAIN-216ENST00000575599 F8WDY8 70 aa8.38□□□□□ -1.07
RPAIN-216ENST00000575599 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
RPAIN-216ENST00000575599 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
RPAIN-216ENST00000575599 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
RPAIN-216ENST00000575599 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
RPAIN-216ENST00000575599 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
RPAIN-216ENST00000575599 LINC00587B1AMM8 73 aa8.37□□□□□ -1.07
RPAIN-216ENST00000575599 PTTG1IPP53801 180 aa8.37□□□□□ -1.07
RPAIN-216ENST00000575599 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
RPAIN-216ENST00000575599 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
RPAIN-216ENST00000575599 KRTAP5-3Q6L8H2 238 aa8.37□□□□□ -1.07
RPAIN-216ENST00000575599 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
RPAIN-216ENST00000575599 ZNF625Q96I27 306 aaPredicted RBP8.37□□□□□ -1.07
RPAIN-216ENST00000575599 DLEU1O43261 78 aa8.36□□□□□ -1.07
RPAIN-216ENST00000575599 C10orf25Q5T742 122 aa8.36□□□□□ -1.07
RPAIN-216ENST00000575599 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
RPAIN-216ENST00000575599 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
RPAIN-216ENST00000575599 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
RPAIN-216ENST00000575599 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
RPAIN-216ENST00000575599 MIEN1Q9BRT3 115 aa8.35□□□□□ -1.07
RPAIN-216ENST00000575599 SRRM2Q9UQ35 2752 aaKnown RBP8.35□□□□□ -1.07
RPAIN-216ENST00000575599 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
RPAIN-216ENST00000575599 RNF151Q2KHN1 245 aa8.35□□□□□ -1.07
RPAIN-216ENST00000575599 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
RPAIN-216ENST00000575599 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
RPAIN-216ENST00000575599 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
RPAIN-216ENST00000575599 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
RPAIN-216ENST00000575599 LINC00158P58513 81 aa8.34□□□□□ -1.07
RPAIN-216ENST00000575599 TMEM238C9JI98 176 aa8.33□□□□□ -1.08
RPAIN-216ENST00000575599 PFN2P35080 140 aa8.33□□□□□ -1.08
RPAIN-216ENST00000575599 ERG28Q9UKR5 140 aa8.33□□□□□ -1.08
RPAIN-216ENST00000575599 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
RPAIN-216ENST00000575599 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
RPAIN-216ENST00000575599 TIMM17BO60830 172 aa8.31□□□□□ -1.08
RPAIN-216ENST00000575599 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
RPAIN-216ENST00000575599 COX17Q14061 63 aa8.31□□□□□ -1.08
RPAIN-216ENST00000575599 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
RPAIN-216ENST00000575599 Q6ZRP5 223 aa8.31□□□□□ -1.08
RPAIN-216ENST00000575599 GAGE2DQ9UEU5 116 aa8.31□□□□□ -1.08
RPAIN-216ENST00000575599 TP73-AS1Q9UF72 201 aa8.31□□□□□ -1.08
RPAIN-216ENST00000575599 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
RPAIN-216ENST00000575599 TLX1NBP0CAT3 122 aa8.3□□□□□ -1.08
RPAIN-216ENST00000575599 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
RPAIN-216ENST00000575599 HIST1H4GQ99525 98 aa8.3□□□□□ -1.08
RPAIN-216ENST00000575599 HIGD1BQ9P298 99 aa8.3□□□□□ -1.08
RPAIN-216ENST00000575599 COPS9Q8WXC6 57 aa8.29□□□□□ -1.08
RPAIN-216ENST00000575599 PCP4L1A6NKN8 68 aa8.28□□□□□ -1.08
RPAIN-216ENST00000575599 PRR3P79522 188 aaKnown RBP8.28□□□□□ -1.08
RPAIN-216ENST00000575599 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.08
RPAIN-216ENST00000575599 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
RPAIN-216ENST00000575599 NDUFC2-KCTD14E9PQ53 114 aa8.27□□□□□ -1.09
RPAIN-216ENST00000575599 DDTP30046 118 aa8.27□□□□□ -1.09
RPAIN-216ENST00000575599 C2orf91Q6ZV80 131 aa8.27□□□□□ -1.09
RPAIN-216ENST00000575599 Q6ZVH6 145 aa8.27□□□□□ -1.09
RPAIN-216ENST00000575599 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
RPAIN-216ENST00000575599 FAM19A5Q7Z5A7 132 aaPredicted RBP8.26□□□□□ -1.09
RPAIN-216ENST00000575599 DAND5Q8N907 189 aa8.26□□□□□ -1.09
RPAIN-216ENST00000575599 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
RPAIN-216ENST00000575599 SPANXB1Q9NS25 103 aaPredicted RBP8.26□□□□□ -1.09
RPAIN-216ENST00000575599 SPANXCQ9NY87 97 aa8.26□□□□□ -1.09
RPAIN-216ENST00000575599 H3BS24 57 aa8.25□□□□□ -1.09
RPAIN-216ENST00000575599 NPC2P61916 151 aa8.25□□□□□ -1.09
RPAIN-216ENST00000575599 HSD52Q0P140 79 aa8.25□□□□□ -1.09
RPAIN-216ENST00000575599 TAL2Q16559 108 aa8.25□□□□□ -1.09
RPAIN-216ENST00000575599 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
RPAIN-216ENST00000575599 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
RPAIN-216ENST00000575599 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
RPAIN-216ENST00000575599 IFITM1P13164 125 aa8.24□□□□□ -1.09
RPAIN-216ENST00000575599 CTAG1AP78358 180 aa8.24□□□□□ -1.09
RPAIN-216ENST00000575599 LCE5AQ5TCM9 118 aa8.24□□□□□ -1.09
RPAIN-216ENST00000575599 LITAFQ99732 161 aa8.24□□□□□ -1.09
RPAIN-216ENST00000575599 LRP1Q07954 4544 aaKnown RBP8.24□□□□□ -1.09
RPAIN-216ENST00000575599 C9orf129Q5T035 196 aaKnown RBP8.23□□□□□ -1.09
RPAIN-216ENST00000575599 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
RPAIN-216ENST00000575599 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
RPAIN-216ENST00000575599 RPL24P83731 157 aaKnown RBP8.22□□□□□ -1.09
RPAIN-216ENST00000575599 MUSTN1Q8IVN3 82 aa8.22□□□□□ -1.09
RPAIN-216ENST00000575599 LINC00308Q8TCZ7 52 aa8.22□□□□□ -1.09
RPAIN-216ENST00000575599 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
RPAIN-216ENST00000575599 HERC1Q15751 4861 aa8.22□□□□□ -1.09
RPAIN-216ENST00000575599 M0QXV9 152 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms