RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 EPM2AB3EWF7 344 aa11.35□□□□□ -0.59
CLDN7-208ENST00000575313 FAM229AH3BQW9 127 aa11.35□□□□□ -0.59
CLDN7-208ENST00000575313 LITAFQ99732 161 aa11.35□□□□□ -0.59
CLDN7-208ENST00000575313 PTTG1IPP53801 180 aa11.34□□□□□ -0.59
CLDN7-208ENST00000575313 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
CLDN7-208ENST00000575313 MIR7-3HGQ8N6C7 128 aa11.34□□□□□ -0.59
CLDN7-208ENST00000575313 PRO1933Q9H354 126 aa11.34□□□□□ -0.59
CLDN7-208ENST00000575313 A0A087WYN8 130 aa11.33□□□□□ -0.6
CLDN7-208ENST00000575313 Q5VSD8 79 aa11.33□□□□□ -0.6
CLDN7-208ENST00000575313 DAND5Q8N907 189 aa11.33□□□□□ -0.6
CLDN7-208ENST00000575313 TMEM238C9JI98 176 aa11.32□□□□□ -0.6
CLDN7-208ENST00000575313 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
CLDN7-208ENST00000575313 SND1-IT1Q9HBX3 110 aa11.32□□□□□ -0.6
CLDN7-208ENST00000575313 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
CLDN7-208ENST00000575313 PLAC8Q9NZF1 115 aa11.32□□□□□ -0.6
CLDN7-208ENST00000575313 UQCR10Q9UDW1 63 aa11.31□□□□□ -0.6
CLDN7-208ENST00000575313 C9orf129Q5T035 196 aaKnown RBP11.3□□□□□ -0.6
CLDN7-208ENST00000575313 PCLOQ9Y6V0 5065 aa11.3□□□□□ -0.6
CLDN7-208ENST00000575313 C2orf91Q6ZV80 131 aa11.29□□□□□ -0.6
CLDN7-208ENST00000575313 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
CLDN7-208ENST00000575313 KRTAP4-5Q9BYR2 181 aa11.29□□□□□ -0.6
CLDN7-208ENST00000575313 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
CLDN7-208ENST00000575313 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
CLDN7-208ENST00000575313 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
CLDN7-208ENST00000575313 SRSF9Q13242 221 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLDN7-208ENST00000575313 MIEN1Q9BRT3 115 aa11.28□□□□□ -0.6
CLDN7-208ENST00000575313 SPANXB1Q9NS25 103 aaPredicted RBP11.28□□□□□ -0.6
CLDN7-208ENST00000575313 NPC2P61916 151 aa11.27□□□□□ -0.61
CLDN7-208ENST00000575313 Q6ZVH6 145 aa11.27□□□□□ -0.61
CLDN7-208ENST00000575313 LINC00308Q8TCZ7 52 aa11.26□□□□□ -0.61
CLDN7-208ENST00000575313 LOC107984156A0A0G2JMH3 177 aa11.25□□□□□ -0.61
CLDN7-208ENST00000575313 TSTD3H0UI37 97 aa11.25□□□□□ -0.61
CLDN7-208ENST00000575313 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
CLDN7-208ENST00000575313 ARL17AQ8IVW1 177 aa11.25□□□□□ -0.61
CLDN7-208ENST00000575313 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
CLDN7-208ENST00000575313 EIF4EBP3O60516 100 aaPredicted RBP11.24□□□□□ -0.61
CLDN7-208ENST00000575313 IFITM1P13164 125 aa11.24□□□□□ -0.61
CLDN7-208ENST00000575313 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
CLDN7-208ENST00000575313 HIST1H4GQ99525 98 aa11.24□□□□□ -0.61
CLDN7-208ENST00000575313 FAT1Q14517 4588 aa11.24□□□□□ -0.61
CLDN7-208ENST00000575313 FAM168BA1KXE4 195 aa11.23□□□□□ -0.61
CLDN7-208ENST00000575313 C7orf33Q8WU49 177 aa11.23□□□□□ -0.61
CLDN7-208ENST00000575313 HNRNPA3P51991 378 aaKnown RBP11.22□□□□□ -0.61
CLDN7-208ENST00000575313 COPS9Q8WXC6 57 aa11.22□□□□□ -0.61
CLDN7-208ENST00000575313 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
CLDN7-208ENST00000575313 RPL37AP61513 92 aaKnown RBP11.21□□□□□ -0.61
CLDN7-208ENST00000575313 SERTAD4-AS1Q5TG53 156 aa11.21□□□□□ -0.61
CLDN7-208ENST00000575313 RPL24P83731 157 aaKnown RBP11.2□□□□□ -0.62
CLDN7-208ENST00000575313 TAL2Q16559 108 aa11.2□□□□□ -0.62
CLDN7-208ENST00000575313 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
CLDN7-208ENST00000575313 KRTAP7-1Q8IUC3 87 aa11.2□□□□□ -0.62
CLDN7-208ENST00000575313 Q8NDZ9 215 aa11.2□□□□□ -0.62
CLDN7-208ENST00000575313 VPREB1P12018 145 aa11.19□□□□□ -0.62
CLDN7-208ENST00000575313 PPDPFQ9H3Y8 114 aa11.19□□□□□ -0.62
CLDN7-208ENST00000575313 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
CLDN7-208ENST00000575313 IGLV5-37A0A075B6J1 123 aa11.17□□□□□ -0.62
CLDN7-208ENST00000575313 NDUFC2O95298 119 aa11.17□□□□□ -0.62
CLDN7-208ENST00000575313 PRR3P79522 188 aaKnown RBP11.17□□□□□ -0.62
CLDN7-208ENST00000575313 NKAPP1Q8N9T2 125 aa11.17□□□□□ -0.62
CLDN7-208ENST00000575313 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
CLDN7-208ENST00000575313 VPS13BQ7Z7G8 4022 aa11.17□□□□□ -0.62
CLDN7-208ENST00000575313 KRTAP10-4P60372 401 aaPredicted RBP11.16□□□□□ -0.62
CLDN7-208ENST00000575313 HSD52Q0P140 79 aa11.16□□□□□ -0.62
CLDN7-208ENST00000575313 CEND1Q8N111 149 aa11.16□□□□□ -0.62
CLDN7-208ENST00000575313 M0QXV9 152 aa11.15□□□□□ -0.62
CLDN7-208ENST00000575313 A4D1N5 150 aa11.14□□□□□ -0.63
CLDN7-208ENST00000575313 NCR3O14931 201 aa11.14□□□□□ -0.63
CLDN7-208ENST00000575313 CTAG1AP78358 180 aa11.14□□□□□ -0.63
CLDN7-208ENST00000575313 SRRM2Q9UQ35 2752 aaKnown RBP11.14□□□□□ -0.63
CLDN7-208ENST00000575313 M0R378 163 aa11.13□□□□□ -0.63
CLDN7-208ENST00000575313 PHF5AQ7RTV0 110 aaKnown RBP11.13□□□□□ -0.63
CLDN7-208ENST00000575313 ABCA13Q86UQ4 5058 aa11.12□□□□□ -0.63
CLDN7-208ENST00000575313 DDTP30046 118 aa11.12□□□□□ -0.63
CLDN7-208ENST00000575313 MRPL55Q7Z7F7 128 aaKnown RBP11.12□□□□□ -0.63
CLDN7-208ENST00000575313 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
CLDN7-208ENST00000575313 TRBV10-2A0A0K0K1G8 114 aa11.11□□□□□ -0.63
CLDN7-208ENST00000575313 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
CLDN7-208ENST00000575313 LBHQ53QV2 105 aaPredicted RBP11.11□□□□□ -0.63
CLDN7-208ENST00000575313 LINC00167Q96N53 147 aa11.11□□□□□ -0.63
CLDN7-208ENST00000575313 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
CLDN7-208ENST00000575313 FXYD2P54710 66 aa11.1□□□□□ -0.63
CLDN7-208ENST00000575313 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
CLDN7-208ENST00000575313 A6NJY4 79 aa11.07□□□□□ -0.64
CLDN7-208ENST00000575313 RPL37AP8A6NKH3 93 aa11.07□□□□□ -0.64
CLDN7-208ENST00000575313 HINT1P49773 126 aaPredicted RBP11.07□□□□□ -0.64
CLDN7-208ENST00000575313 S100A7L2Q5SY68 101 aa11.07□□□□□ -0.64
CLDN7-208ENST00000575313 BVES-AS1Q5T3Y7 98 aa11.07□□□□□ -0.64
CLDN7-208ENST00000575313 LINC00337Q8N6G1 96 aa11.07□□□□□ -0.64
CLDN7-208ENST00000575313 OR13C6PQ8NH95 151 aa11.07□□□□□ -0.64
CLDN7-208ENST00000575313 UBE2BP63146 152 aa11.06□□□□□ -0.64
CLDN7-208ENST00000575313 IGLV1-50A0A075B6I6 118 aa11.05□□□□□ -0.64
CLDN7-208ENST00000575313 TRAV13-2A0A0B4J235 113 aa11.05□□□□□ -0.64
CLDN7-208ENST00000575313 TRBV10-3A0A0K0K1G6 114 aa11.05□□□□□ -0.64
CLDN7-208ENST00000575313 CFC1BP0CG36 223 aa11.05□□□□□ -0.64
CLDN7-208ENST00000575313 CFC1P0CG37 223 aa11.05□□□□□ -0.64
CLDN7-208ENST00000575313 PSORS1C2Q9UIG4 136 aa11.05□□□□□ -0.64
CLDN7-208ENST00000575313 A6NDN8 102 aa11.04□□□□□ -0.64
CLDN7-208ENST00000575313 M0R143 59 aa11.04□□□□□ -0.64
CLDN7-208ENST00000575313 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
CLDN7-208ENST00000575313 PCP4L1A6NKN8 68 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms