RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 DNAL4O96015 105 aa15.76■□□□□ 0.11
NPLOC4-217ENST00000574897 LINC01556Q5JQF7 62 aa15.76■□□□□ 0.11
NPLOC4-217ENST00000574897 XAGE1AQ9HD64 81 aa15.75■□□□□ 0.11
NPLOC4-217ENST00000574897 ZNF561-AS1K7EIQ3 104 aa15.74■□□□□ 0.11
NPLOC4-217ENST00000574897 COL7A1Q02388 2944 aa15.74■□□□□ 0.11
NPLOC4-217ENST00000574897 C9orf129Q5T035 196 aaKnown RBP15.73■□□□□ 0.11
NPLOC4-217ENST00000574897 TMEM126AQ9H061 195 aa15.73■□□□□ 0.11
NPLOC4-217ENST00000574897 IGKV2D-24A0A075B6R9 120 aa15.73■□□□□ 0.11
NPLOC4-217ENST00000574897 GVQW2A0A096LPI5 108 aaPredicted RBP15.73■□□□□ 0.11
NPLOC4-217ENST00000574897 CAMK2N2Q96S95 79 aa15.73■□□□□ 0.11
NPLOC4-217ENST00000574897 C1orf43Q9BWL3 253 aa15.72■□□□□ 0.11
NPLOC4-217ENST00000574897 TRAV10A0A0B4J240 114 aa15.72■□□□□ 0.11
NPLOC4-217ENST00000574897 C15orf53Q8NAA6 179 aa15.71■□□□□ 0.11
NPLOC4-217ENST00000574897 RPL18AQ02543 176 aaKnown RBP15.71■□□□□ 0.11
NPLOC4-217ENST00000574897 Q6ZRU5 148 aa15.71■□□□□ 0.11
NPLOC4-217ENST00000574897 S100A7L2Q5SY68 101 aa15.7■□□□□ 0.1
NPLOC4-217ENST00000574897 SCGB1A1P11684 91 aa15.7■□□□□ 0.1
NPLOC4-217ENST00000574897 C6orf99Q4VX62 202 aa15.69■□□□□ 0.1
NPLOC4-217ENST00000574897 LINC00588Q9Y4M8 146 aa15.69■□□□□ 0.1
NPLOC4-217ENST00000574897 DNAH10OSP0CZ25 163 aa15.67■□□□□ 0.1
NPLOC4-217ENST00000574897 MUC7Q8TAX7 377 aa15.66■□□□□ 0.1
NPLOC4-217ENST00000574897 STAB2Q8WWQ8 2551 aa15.66■□□□□ 0.1
NPLOC4-217ENST00000574897 TTC32Q5I0X7 151 aa15.65■□□□□ 0.1
NPLOC4-217ENST00000574897 A0A1B0GV72 72 aa15.64■□□□□ 0.09
NPLOC4-217ENST00000574897 FAM240AA0A1B0GVK7 77 aa15.63■□□□□ 0.09
NPLOC4-217ENST00000574897 Q8N814 137 aa15.63■□□□□ 0.09
NPLOC4-217ENST00000574897 MDFIQ99750 246 aa15.63■□□□□ 0.09
NPLOC4-217ENST00000574897 IGLV6-57P01721 117 aa15.62■□□□□ 0.09
NPLOC4-217ENST00000574897 SNCGO76070 127 aa15.61■□□□□ 0.09
NPLOC4-217ENST00000574897 TRBV10-3A0A0K0K1G6 114 aa15.6■□□□□ 0.09
NPLOC4-217ENST00000574897 GAGE2EQ4V326 116 aa15.6■□□□□ 0.09
NPLOC4-217ENST00000574897 C14orf132Q9NPU4 83 aa15.6■□□□□ 0.09
NPLOC4-217ENST00000574897 ORMDL1Q9P0S3 153 aa15.6■□□□□ 0.09
NPLOC4-217ENST00000574897 GAGE2DQ9UEU5 116 aa15.6■□□□□ 0.09
NPLOC4-217ENST00000574897 CASC10Q5T4H9 136 aa15.6■□□□□ 0.09
NPLOC4-217ENST00000574897 C2orf48Q96LS8 159 aa15.6■□□□□ 0.09
NPLOC4-217ENST00000574897 LYSTQ99698 3801 aa15.59■□□□□ 0.09
NPLOC4-217ENST00000574897 LINC00167Q96N53 147 aa15.58■□□□□ 0.09
NPLOC4-217ENST00000574897 DNAH1Q9P2D7 4330 aa15.58■□□□□ 0.08
NPLOC4-217ENST00000574897 GAGE2AQ6NT46 116 aa15.57■□□□□ 0.08
NPLOC4-217ENST00000574897 SMCR5Q8TEV8 140 aa15.57■□□□□ 0.08
NPLOC4-217ENST00000574897 NDUFC2-KCTD14E9PQ53 114 aa15.56■□□□□ 0.08
NPLOC4-217ENST00000574897 INAFM2P0DMQ5 153 aa15.56■□□□□ 0.08
NPLOC4-217ENST00000574897 Q6ZRP5 223 aa15.56■□□□□ 0.08
NPLOC4-217ENST00000574897 VPREB1P12018 145 aa15.56■□□□□ 0.08
NPLOC4-217ENST00000574897 DNAH9Q9NYC9 4486 aa15.55■□□□□ 0.08
NPLOC4-217ENST00000574897 LINC00575Q6W349 94 aa15.55■□□□□ 0.08
NPLOC4-217ENST00000574897 OBSCN-AS1Q96MR7 158 aa15.55■□□□□ 0.08
NPLOC4-217ENST00000574897 SYCNQ0VAF6 134 aa15.54■□□□□ 0.08
NPLOC4-217ENST00000574897 A0A1B0GX51 115 aa15.53■□□□□ 0.08
NPLOC4-217ENST00000574897 TRAV23DV6A0A075B6W5 121 aa15.52■□□□□ 0.08
NPLOC4-217ENST00000574897 ACYP1P07311 99 aa15.51■□□□□ 0.07
NPLOC4-217ENST00000574897 GAGE2BQ13066 116 aa15.5■□□□□ 0.07
NPLOC4-217ENST00000574897 USP17L23D6RBM5 183 aa15.49■□□□□ 0.07
NPLOC4-217ENST00000574897 hADV29S1A0JD25 119 aa15.48■□□□□ 0.07
NPLOC4-217ENST00000574897 DIRC1Q969H9 104 aa15.46■□□□□ 0.07
NPLOC4-217ENST00000574897 ZNF73O43830 326 aaPredicted RBP15.46■□□□□ 0.06
NPLOC4-217ENST00000574897 TMEM256-PLSCR3K7ERE1 68 aa15.44■□□□□ 0.06
NPLOC4-217ENST00000574897 TENM2Q9NT68 2774 aa15.44■□□□□ 0.06
NPLOC4-217ENST00000574897 M0R378 163 aa15.44■□□□□ 0.06
NPLOC4-217ENST00000574897 DNAH10Q8IVF4 4471 aa15.43■□□□□ 0.06
NPLOC4-217ENST00000574897 UPK3BQ9BT76 320 aa15.43■□□□□ 0.06
NPLOC4-217ENST00000574897 SDIM1Q6ZPB5 146 aa15.43■□□□□ 0.06
NPLOC4-217ENST00000574897 SERTAD4-AS1Q5TG53 156 aa15.42■□□□□ 0.06
NPLOC4-217ENST00000574897 Q6ZQY7 126 aa15.42■□□□□ 0.06
NPLOC4-217ENST00000574897 CSMD3Q7Z407 3707 aa15.42■□□□□ 0.06
NPLOC4-217ENST00000574897 F8WDY8 70 aa15.41■□□□□ 0.06
NPLOC4-217ENST00000574897 KRTAP1-5Q9BYS1 174 aa15.41■□□□□ 0.06
NPLOC4-217ENST00000574897 Q6Q795 121 aa15.4■□□□□ 0.06
NPLOC4-217ENST00000574897 COX7BP24311 80 aa15.39■□□□□ 0.05
NPLOC4-217ENST00000574897 LINC00846Q9NV44 126 aa15.39■□□□□ 0.05
NPLOC4-217ENST00000574897 LINC00643Q86TS7 51 aa15.38■□□□□ 0.05
NPLOC4-217ENST00000574897 ELOF1P60002 83 aaKnown RBP15.38■□□□□ 0.05
NPLOC4-217ENST00000574897 DNAH7Q8WXX0 4024 aa15.37■□□□□ 0.05
NPLOC4-217ENST00000574897 FAM168BA1KXE4 195 aa15.36■□□□□ 0.05
NPLOC4-217ENST00000574897 TRBV7-7A0A0K0K1E9 115 aa15.36■□□□□ 0.05
NPLOC4-217ENST00000574897 JMJD7-PLA2G4BH0Y9G9 81 aa15.36■□□□□ 0.05
NPLOC4-217ENST00000574897 RMI2Q96E14 147 aa15.35■□□□□ 0.05
NPLOC4-217ENST00000574897 NDUFV3P56181 108 aaKnown RBP15.34■□□□□ 0.05
NPLOC4-217ENST00000574897 CCKP06307 115 aa15.34■□□□□ 0.05
NPLOC4-217ENST00000574897 ANAPC13Q9BS18 74 aa15.34■□□□□ 0.05
NPLOC4-217ENST00000574897 TLX1NBP0CAT3 122 aa15.33■□□□□ 0.04
NPLOC4-217ENST00000574897 NHLRC4P0CG21 123 aaPredicted RBP15.33■□□□□ 0.04
NPLOC4-217ENST00000574897 C7orf33Q8WU49 177 aa15.33■□□□□ 0.04
NPLOC4-217ENST00000574897 NKAPP1Q8N9T2 125 aa15.33■□□□□ 0.04
NPLOC4-217ENST00000574897 B9D2Q9BPU9 175 aa15.33■□□□□ 0.04
NPLOC4-217ENST00000574897 LAMTOR3Q9UHA4 124 aa15.32■□□□□ 0.04
NPLOC4-217ENST00000574897 APLNQ9ULZ1 77 aa15.32■□□□□ 0.04
NPLOC4-217ENST00000574897 LINC00528Q8N1L1 170 aa15.31■□□□□ 0.04
NPLOC4-217ENST00000574897 DYNC2H1Q8NCM8 4307 aaKnown RBP15.3■□□□□ 0.04
NPLOC4-217ENST00000574897 KRTAP7-1Q8IUC3 87 aa15.29■□□□□ 0.04
NPLOC4-217ENST00000574897 UBE2DNLQ8IWF7 75 aa15.29■□□□□ 0.04
NPLOC4-217ENST00000574897 TRBV7-6A0A0J9YX20 115 aa15.28■□□□□ 0.04
NPLOC4-217ENST00000574897 RPL37AP8A6NKH3 93 aa15.27■□□□□ 0.04
NPLOC4-217ENST00000574897 RBM3P98179 157 aaKnown RBP15.27■□□□□ 0.03
NPLOC4-217ENST00000574897 PLECQ15149 4684 aaKnown RBP15.27■□□□□ 0.03
NPLOC4-217ENST00000574897 M0R2N4 97 aa15.26■□□□□ 0.03
NPLOC4-217ENST00000574897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.26■□□□□ 0.03
NPLOC4-217ENST00000574897 IGKV3D-7A0A0C4DH55 119 aa15.25■□□□□ 0.03
NPLOC4-217ENST00000574897 KCNQ1DNQ9H478 68 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms