RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 LITAFQ99732 161 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 XAGE1AQ9HD64 81 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 APOBP04114 4563 aaKnown RBP4.29□□□□□ -1.72
PRPF8-210ENST00000574217 TSTD3H0UI37 97 aa4.28□□□□□ -1.72
PRPF8-210ENST00000574217 ADAMTSL4-AS1Q5T5F5 129 aa4.28□□□□□ -1.72
PRPF8-210ENST00000574217 Q6ZVH6 145 aa4.28□□□□□ -1.72
PRPF8-210ENST00000574217 MIEN1Q9BRT3 115 aa4.28□□□□□ -1.72
PRPF8-210ENST00000574217 PRO1933Q9H354 126 aa4.28□□□□□ -1.72
PRPF8-210ENST00000574217 UQCR10Q9UDW1 63 aa4.28□□□□□ -1.72
PRPF8-210ENST00000574217 HERC2O95714 4834 aa4.28□□□□□ -1.72
PRPF8-210ENST00000574217 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 NPC2P61916 151 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
PRPF8-210ENST00000574217 C9orf129Q5T035 196 aaKnown RBP4.27□□□□□ -1.73
PRPF8-210ENST00000574217 C2orf91Q6ZV80 131 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 SPACA4Q8TDM5 124 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 COPS9Q8WXC6 57 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 DPH3Q96FX2 82 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 SPANXDQ9BXN6 97 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 SPANXB1Q9NS25 103 aaPredicted RBP4.27□□□□□ -1.73
PRPF8-210ENST00000574217 SPANXCQ9NY87 97 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 FAM30AQ9NZY2 134 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 HIGD1BQ9P298 99 aa4.27□□□□□ -1.73
PRPF8-210ENST00000574217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.27□□□□□ -1.73
PRPF8-210ENST00000574217 PANO1I0J062 215 aa4.26□□□□□ -1.73
PRPF8-210ENST00000574217 HNRNPA3P51991 378 aaKnown RBP4.26□□□□□ -1.73
PRPF8-210ENST00000574217 XGP55808 180 aa4.26□□□□□ -1.73
PRPF8-210ENST00000574217 HAMPP81172 84 aa4.26□□□□□ -1.73
PRPF8-210ENST00000574217 Q6ZSA8 131 aa4.26□□□□□ -1.73
PRPF8-210ENST00000574217 LINC00308Q8TCZ7 52 aa4.26□□□□□ -1.73
PRPF8-210ENST00000574217 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
PRPF8-210ENST00000574217 LOC107984156A0A0G2JMH3 177 aa4.25□□□□□ -1.73
PRPF8-210ENST00000574217 IFITM1P13164 125 aa4.25□□□□□ -1.73
PRPF8-210ENST00000574217 RPL24P83731 157 aaKnown RBP4.25□□□□□ -1.73
PRPF8-210ENST00000574217 SOSTDC1Q6X4U4 206 aa4.25□□□□□ -1.73
PRPF8-210ENST00000574217 ARL17AQ8IVW1 177 aa4.25□□□□□ -1.73
PRPF8-210ENST00000574217 HSPG2P98160 4391 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 A0A087WYN8 130 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 A0A1W2PNN7 141 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 FAM168BA1KXE4 195 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 EIF4EBP3O60516 100 aaPredicted RBP4.24□□□□□ -1.73
PRPF8-210ENST00000574217 TAL2Q16559 108 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 SERTAD4-AS1Q5TG53 156 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
PRPF8-210ENST00000574217 MUSTN1Q8IVN3 82 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 PPDPFQ9H3Y8 114 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
PRPF8-210ENST00000574217 M0QXV9 152 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 NDUFC2O95298 119 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 VPREB1P12018 145 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 HSD52Q0P140 79 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 SCXQ7RTU7 201 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 NKAPP1Q8N9T2 125 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 CIRBP-AS1Q8TBR5 109 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 PLAC8Q9NZF1 115 aa4.23□□□□□ -1.73
PRPF8-210ENST00000574217 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
PRPF8-210ENST00000574217 NCR3O14931 201 aa4.22□□□□□ -1.73
PRPF8-210ENST00000574217 SMR3BP02814 79 aaPredicted RBP4.22□□□□□ -1.73
PRPF8-210ENST00000574217 MRPL55Q7Z7F7 128 aaKnown RBP4.22□□□□□ -1.73
PRPF8-210ENST00000574217 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
PRPF8-210ENST00000574217 CEND1Q8N111 149 aa4.22□□□□□ -1.73
PRPF8-210ENST00000574217 Q8NDZ9 215 aa4.22□□□□□ -1.73
PRPF8-210ENST00000574217 C22orf24Q9Y442 160 aa4.22□□□□□ -1.73
PRPF8-210ENST00000574217 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
PRPF8-210ENST00000574217 A4D1N5 150 aa4.21□□□□□ -1.74
PRPF8-210ENST00000574217 EPM2AB3EWF7 344 aa4.21□□□□□ -1.74
PRPF8-210ENST00000574217 M0R378 163 aa4.21□□□□□ -1.74
PRPF8-210ENST00000574217 DDTP30046 118 aa4.21□□□□□ -1.74
PRPF8-210ENST00000574217 CTAG1AP78358 180 aa4.21□□□□□ -1.74
PRPF8-210ENST00000574217 PRR3P79522 188 aaKnown RBP4.21□□□□□ -1.74
PRPF8-210ENST00000574217 LBHQ53QV2 105 aaPredicted RBP4.21□□□□□ -1.74
PRPF8-210ENST00000574217 IGKV2-28A0A075B6P5 120 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 GAGE10A6NGK3 116 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 IGKV2D-28P01615 120 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 FXYD2P54710 66 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 UBE2BP63146 152 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 S100A7L2Q5SY68 101 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 PHF5AQ7RTV0 110 aaKnown RBP4.2□□□□□ -1.74
PRPF8-210ENST00000574217 Q8N1X5 172 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 C7orf33Q8WU49 177 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 KRTAP4-5Q9BYR2 181 aa4.2□□□□□ -1.74
PRPF8-210ENST00000574217 TRAV13-2A0A0B4J235 113 aa4.19□□□□□ -1.74
PRPF8-210ENST00000574217 A6NDN8 102 aa4.19□□□□□ -1.74
PRPF8-210ENST00000574217 RPL37AP8A6NKH3 93 aa4.19□□□□□ -1.74
PRPF8-210ENST00000574217 M0R143 59 aa4.19□□□□□ -1.74
PRPF8-210ENST00000574217 HINT1P49773 126 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-210ENST00000574217 OR13C6PQ8NH95 151 aa4.19□□□□□ -1.74
PRPF8-210ENST00000574217 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
PRPF8-210ENST00000574217 IGLV1-50A0A075B6I6 118 aa4.18□□□□□ -1.74
PRPF8-210ENST00000574217 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
PRPF8-210ENST00000574217 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
PRPF8-210ENST00000574217 BVES-AS1Q5T3Y7 98 aa4.18□□□□□ -1.74
PRPF8-210ENST00000574217 Q5VSD8 79 aa4.18□□□□□ -1.74
PRPF8-210ENST00000574217 LINC00337Q8N6G1 96 aa4.18□□□□□ -1.74
PRPF8-210ENST00000574217 RAB37Q96AX2 223 aa4.18□□□□□ -1.74
PRPF8-210ENST00000574217 TMEM126AQ9H061 195 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms