RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 IFI27L1Q96BM0 104 aa5.72□□□□□ -1.49
NPLOC4-212ENST00000573328 CHCHD1Q96BP2 118 aaKnown RBP5.72□□□□□ -1.49
NPLOC4-212ENST00000573328 RNF213Q63HN8 5207 aa5.71□□□□□ -1.49
NPLOC4-212ENST00000573328 TMEM238C9JI98 176 aa5.71□□□□□ -1.5
NPLOC4-212ENST00000573328 H0Y8G0 127 aa5.71□□□□□ -1.5
NPLOC4-212ENST00000573328 HSBP1O75506 76 aa5.71□□□□□ -1.5
NPLOC4-212ENST00000573328 C4orf48Q5BLP8 95 aa5.71□□□□□ -1.5
NPLOC4-212ENST00000573328 TMEM126AQ9H061 195 aa5.71□□□□□ -1.5
NPLOC4-212ENST00000573328 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
NPLOC4-212ENST00000573328 TRAV12-1A0A0B4J245 112 aa5.7□□□□□ -1.5
NPLOC4-212ENST00000573328 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
NPLOC4-212ENST00000573328 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
NPLOC4-212ENST00000573328 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
NPLOC4-212ENST00000573328 CBLN2Q8IUK8 224 aa5.7□□□□□ -1.5
NPLOC4-212ENST00000573328 FAM19A2Q8N3H0 131 aa5.69□□□□□ -1.5
NPLOC4-212ENST00000573328 IGKV2D-26A0A0A0MRZ7 120 aa5.68□□□□□ -1.5
NPLOC4-212ENST00000573328 M0R378 163 aa5.68□□□□□ -1.5
NPLOC4-212ENST00000573328 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
NPLOC4-212ENST00000573328 FAM229BQ4G0N7 80 aa5.68□□□□□ -1.5
NPLOC4-212ENST00000573328 Q8NDZ9 215 aa5.68□□□□□ -1.5
NPLOC4-212ENST00000573328 YPEL4Q96NS1 127 aa5.68□□□□□ -1.5
NPLOC4-212ENST00000573328 HIGD2AQ9BW72 106 aa5.68□□□□□ -1.5
NPLOC4-212ENST00000573328 NCR3O14931 201 aa5.67□□□□□ -1.5
NPLOC4-212ENST00000573328 KRTAP13-2Q52LG2 175 aa5.67□□□□□ -1.5
NPLOC4-212ENST00000573328 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
NPLOC4-212ENST00000573328 LEPROTL1O95214 131 aa5.66□□□□□ -1.5
NPLOC4-212ENST00000573328 TRGC2P03986 189 aa5.66□□□□□ -1.5
NPLOC4-212ENST00000573328 HERV-K104P63124 156 aa5.66□□□□□ -1.5
NPLOC4-212ENST00000573328 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
NPLOC4-212ENST00000573328 MIR7-3HGQ8N6C7 128 aa5.66□□□□□ -1.5
NPLOC4-212ENST00000573328 NDUFA12Q9UI09 145 aa5.66□□□□□ -1.5
NPLOC4-212ENST00000573328 MYMXA0A1B0GTQ4 84 aa5.65□□□□□ -1.5
NPLOC4-212ENST00000573328 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
NPLOC4-212ENST00000573328 LINC00587B1AMM8 73 aa5.64□□□□□ -1.51
NPLOC4-212ENST00000573328 PRYO14603 147 aa5.64□□□□□ -1.51
NPLOC4-212ENST00000573328 SERF1AO75920 110 aa5.64□□□□□ -1.51
NPLOC4-212ENST00000573328 S100A12P80511 92 aa5.64□□□□□ -1.51
NPLOC4-212ENST00000573328 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
NPLOC4-212ENST00000573328 ETDCA0A1B0GVM5 59 aa5.63□□□□□ -1.51
NPLOC4-212ENST00000573328 FABP4P15090 132 aa5.63□□□□□ -1.51
NPLOC4-212ENST00000573328 PLNP26678 52 aa5.63□□□□□ -1.51
NPLOC4-212ENST00000573328 HERVK_113P61574 105 aa5.63□□□□□ -1.51
NPLOC4-212ENST00000573328 PLEKHB2Q96CS7 222 aa5.63□□□□□ -1.51
NPLOC4-212ENST00000573328 HSPB8Q9UJY1 196 aa5.63□□□□□ -1.51
NPLOC4-212ENST00000573328 ZNF706Q9Y5V0 76 aaPredicted RBP5.63□□□□□ -1.51
NPLOC4-212ENST00000573328 LEPROTO15243 131 aa5.62□□□□□ -1.51
NPLOC4-212ENST00000573328 C3orf22Q8N5N4 141 aa5.62□□□□□ -1.51
NPLOC4-212ENST00000573328 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
NPLOC4-212ENST00000573328 J3QQQ9 107 aa5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 DPM2O94777 84 aa5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 LINC00310P59036 64 aa5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 TSPEAR-AS2P59090 65 aa5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 DAND5Q8N907 189 aa5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 SPRR4Q96PI1 79 aa5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 PMCHL2Q9BQD1 86 aa5.61□□□□□ -1.51
NPLOC4-212ENST00000573328 TRBV10-3A0A0K0K1G6 114 aa5.6□□□□□ -1.51
NPLOC4-212ENST00000573328 IGKCP01834 107 aa5.6□□□□□ -1.51
NPLOC4-212ENST00000573328 LINC00337Q8N6G1 96 aa5.6□□□□□ -1.51
NPLOC4-212ENST00000573328 NMUP48645 174 aa5.59□□□□□ -1.51
NPLOC4-212ENST00000573328 SLC7A5P1Q8MH63 180 aa5.59□□□□□ -1.51
NPLOC4-212ENST00000573328 PPDPFQ9H3Y8 114 aa5.59□□□□□ -1.51
NPLOC4-212ENST00000573328 KCNQ1DNQ9H478 68 aa5.59□□□□□ -1.51
NPLOC4-212ENST00000573328 DDTP30046 118 aa5.58□□□□□ -1.52
NPLOC4-212ENST00000573328 SMCR5Q8TEV8 140 aa5.58□□□□□ -1.52
NPLOC4-212ENST00000573328 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
NPLOC4-212ENST00000573328 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
NPLOC4-212ENST00000573328 A0A0U1RQV1 116 aa5.57□□□□□ -1.52
NPLOC4-212ENST00000573328 SPRR1AP35321 89 aa5.57□□□□□ -1.52
NPLOC4-212ENST00000573328 NPC2P61916 151 aa5.57□□□□□ -1.52
NPLOC4-212ENST00000573328 S100A7L2Q5SY68 101 aa5.57□□□□□ -1.52
NPLOC4-212ENST00000573328 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
NPLOC4-212ENST00000573328 SPANXB1Q9NS25 103 aaPredicted RBP5.57□□□□□ -1.52
NPLOC4-212ENST00000573328 TRBV10-2A0A0K0K1G8 114 aa5.56□□□□□ -1.52
NPLOC4-212ENST00000573328 COLCA2A8K830 154 aa5.56□□□□□ -1.52
NPLOC4-212ENST00000573328 CTAG1AP78358 180 aa5.56□□□□□ -1.52
NPLOC4-212ENST00000573328 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
NPLOC4-212ENST00000573328 Q8NBF4 154 aa5.56□□□□□ -1.52
NPLOC4-212ENST00000573328 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
NPLOC4-212ENST00000573328 B5MCH6 92 aa5.55□□□□□ -1.52
NPLOC4-212ENST00000573328 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
NPLOC4-212ENST00000573328 LOC107984156A0A0G2JMH3 177 aa5.54□□□□□ -1.52
NPLOC4-212ENST00000573328 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
NPLOC4-212ENST00000573328 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
NPLOC4-212ENST00000573328 TRAV23DV6A0A075B6W5 121 aa5.53□□□□□ -1.52
NPLOC4-212ENST00000573328 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
NPLOC4-212ENST00000573328 E9PLD3 99 aa5.53□□□□□ -1.52
NPLOC4-212ENST00000573328 NDUFC2O95298 119 aa5.53□□□□□ -1.52
NPLOC4-212ENST00000573328 MOBPQ13875 183 aa5.53□□□□□ -1.52
NPLOC4-212ENST00000573328 Q6ZRX8 168 aa5.53□□□□□ -1.52
NPLOC4-212ENST00000573328 SYS1-DBNDD2H3BUS1 97 aa5.52□□□□□ -1.53
NPLOC4-212ENST00000573328 ERC2-IT1O76042 136 aa5.52□□□□□ -1.53
NPLOC4-212ENST00000573328 JOSD1Q15040 202 aaPredicted RBP5.52□□□□□ -1.53
NPLOC4-212ENST00000573328 Q9BRP9 147 aa5.52□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BKO60814 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BJP06899 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BOP23527 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HIST1H2BBP33778 126 aa5.51□□□□□ -1.53
NPLOC4-212ENST00000573328 HINT1P49773 126 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms