RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
HCFC1R1-204ENST00000573095 PMCHL1Q16048 86 aa11.25□□□□□ -0.61
HCFC1R1-204ENST00000573095 Q8NDZ9 215 aa11.25□□□□□ -0.61
HCFC1R1-204ENST00000573095 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
HCFC1R1-204ENST00000573095 M0R378 163 aa11.24□□□□□ -0.61
HCFC1R1-204ENST00000573095 TMEM170BQ5T4T1 132 aa11.24□□□□□ -0.61
HCFC1R1-204ENST00000573095 BAGE3Q86Y29 109 aa11.24□□□□□ -0.61
HCFC1R1-204ENST00000573095 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
HCFC1R1-204ENST00000573095 A0A0U1RQV1 116 aa11.23□□□□□ -0.61
HCFC1R1-204ENST00000573095 ATP6V1G1O75348 118 aa11.22□□□□□ -0.61
HCFC1R1-204ENST00000573095 CTAG1AP78358 180 aa11.21□□□□□ -0.61
HCFC1R1-204ENST00000573095 RETNLBQ9BQ08 111 aa11.21□□□□□ -0.61
HCFC1R1-204ENST00000573095 COLCA2A8K830 154 aa11.19□□□□□ -0.62
HCFC1R1-204ENST00000573095 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
HCFC1R1-204ENST00000573095 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
HCFC1R1-204ENST00000573095 TPRXLQ17RH7 258 aa11.17□□□□□ -0.62
HCFC1R1-204ENST00000573095 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
HCFC1R1-204ENST00000573095 LINC00158P58513 81 aa11.16□□□□□ -0.62
HCFC1R1-204ENST00000573095 HIGD2AQ9BW72 106 aa11.16□□□□□ -0.62
HCFC1R1-204ENST00000573095 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
HCFC1R1-204ENST00000573095 C3orf22Q8N5N4 141 aa11.15□□□□□ -0.62
HCFC1R1-204ENST00000573095 IFI27L1Q96BM0 104 aa11.13□□□□□ -0.63
HCFC1R1-204ENST00000573095 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
HCFC1R1-204ENST00000573095 IGLV7-46A0A075B6I9 117 aa11.12□□□□□ -0.63
HCFC1R1-204ENST00000573095 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
HCFC1R1-204ENST00000573095 S100A1P23297 94 aa11.12□□□□□ -0.63
HCFC1R1-204ENST00000573095 SPRR4Q96PI1 79 aa11.12□□□□□ -0.63
HCFC1R1-204ENST00000573095 PRYO14603 147 aa11.11□□□□□ -0.63
HCFC1R1-204ENST00000573095 CDIP1Q9H305 208 aa11.11□□□□□ -0.63
HCFC1R1-204ENST00000573095 ZNF706Q9Y5V0 76 aaPredicted RBP11.1□□□□□ -0.63
HCFC1R1-204ENST00000573095 MUC17Q685J3 4493 aa11.09□□□□□ -0.63
HCFC1R1-204ENST00000573095 SMIM13P0DJ93 91 aa11.09□□□□□ -0.63
HCFC1R1-204ENST00000573095 SPAG11AQ6PDA7 123 aa11.09□□□□□ -0.63
HCFC1R1-204ENST00000573095 TRGC2P03986 189 aa11.08□□□□□ -0.64
HCFC1R1-204ENST00000573095 SPRR1AP35321 89 aa11.08□□□□□ -0.64
HCFC1R1-204ENST00000573095 HERV-K104P63124 156 aa11.08□□□□□ -0.64
HCFC1R1-204ENST00000573095 MEIG1Q5JSS6 88 aa11.08□□□□□ -0.64
HCFC1R1-204ENST00000573095 BOD1L2Q8IYS8 172 aa11.08□□□□□ -0.64
HCFC1R1-204ENST00000573095 MIR7-3HGQ8N6C7 128 aa11.08□□□□□ -0.64
HCFC1R1-204ENST00000573095 LINC00337Q8N6G1 96 aa11.08□□□□□ -0.64
HCFC1R1-204ENST00000573095 NCR3O14931 201 aa11.06□□□□□ -0.64
HCFC1R1-204ENST00000573095 LCE2AQ5TA79 106 aaPredicted RBP11.06□□□□□ -0.64
HCFC1R1-204ENST00000573095 KCNQ1DNQ9H478 68 aa11.06□□□□□ -0.64
HCFC1R1-204ENST00000573095 KRTAP4-16G5E9R7 235 aaPredicted RBP11.05□□□□□ -0.64
HCFC1R1-204ENST00000573095 PPDPFQ9H3Y8 114 aa11.05□□□□□ -0.64
HCFC1R1-204ENST00000573095 LINC00587B1AMM8 73 aa11.04□□□□□ -0.64
HCFC1R1-204ENST00000573095 LINC00310P59036 64 aa11.04□□□□□ -0.64
HCFC1R1-204ENST00000573095 NDUFA12Q9UI09 145 aa11.04□□□□□ -0.64
HCFC1R1-204ENST00000573095 HSBP1O75506 76 aa11.03□□□□□ -0.64
HCFC1R1-204ENST00000573095 FP248Q71RG6 208 aaPredicted RBP11.03□□□□□ -0.64
HCFC1R1-204ENST00000573095 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
HCFC1R1-204ENST00000573095 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.65
HCFC1R1-204ENST00000573095 TRBV10-3A0A0K0K1G6 114 aa11.01□□□□□ -0.65
HCFC1R1-204ENST00000573095 MYMXA0A1B0GTQ4 84 aa11.01□□□□□ -0.65
HCFC1R1-204ENST00000573095 ETDCA0A1B0GVM5 59 aa11.01□□□□□ -0.65
HCFC1R1-204ENST00000573095 FAM19A2Q8N3H0 131 aa11.01□□□□□ -0.65
HCFC1R1-204ENST00000573095 SMCR5Q8TEV8 140 aa11.01□□□□□ -0.65
HCFC1R1-204ENST00000573095 LINC00483Q53H64 154 aa11□□□□□ -0.65
HCFC1R1-204ENST00000573095 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
HCFC1R1-204ENST00000573095 Q8NBF4 154 aa11□□□□□ -0.65
HCFC1R1-204ENST00000573095 LOC107984156A0A0G2JMH3 177 aa10.98□□□□□ -0.65
HCFC1R1-204ENST00000573095 TSPEAR-AS2P59090 65 aa10.98□□□□□ -0.65
HCFC1R1-204ENST00000573095 S100A12P80511 92 aa10.98□□□□□ -0.65
HCFC1R1-204ENST00000573095 ARL17AQ8IVW1 177 aa10.98□□□□□ -0.65
HCFC1R1-204ENST00000573095 DAND5Q8N907 189 aa10.98□□□□□ -0.65
HCFC1R1-204ENST00000573095 H0Y8G0 127 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 LEPROTO15243 131 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BKO60814 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 SPINK1P00995 79 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BJP06899 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BOP23527 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BBP33778 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BDP58876 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BCP62807 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 KRTAP9-2Q9BYQ4 174 aa10.96□□□□□ -0.65
HCFC1R1-204ENST00000573095 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
HCFC1R1-204ENST00000573095 B5MCH6 92 aa10.95□□□□□ -0.66
HCFC1R1-204ENST00000573095 LEPROTL1O95214 131 aa10.95□□□□□ -0.66
HCFC1R1-204ENST00000573095 PLNP26678 52 aa10.94□□□□□ -0.66
HCFC1R1-204ENST00000573095 SERF1AO75920 110 aa10.93□□□□□ -0.66
HCFC1R1-204ENST00000573095 DDTP30046 118 aa10.93□□□□□ -0.66
HCFC1R1-204ENST00000573095 KRTAP13-3Q3SY46 172 aa10.93□□□□□ -0.66
HCFC1R1-204ENST00000573095 J3QQQ9 107 aa10.92□□□□□ -0.66
HCFC1R1-204ENST00000573095 GAGE2AQ6NT46 116 aa10.92□□□□□ -0.66
HCFC1R1-204ENST00000573095 SPANXB1Q9NS25 103 aaPredicted RBP10.92□□□□□ -0.66
HCFC1R1-204ENST00000573095 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
HCFC1R1-204ENST00000573095 NMUP48645 174 aa10.91□□□□□ -0.66
HCFC1R1-204ENST00000573095 RPS29P62273 56 aaKnown RBP10.91□□□□□ -0.66
HCFC1R1-204ENST00000573095 Q6ZRX8 168 aa10.91□□□□□ -0.66
HCFC1R1-204ENST00000573095 HERVK_113P61574 105 aa10.9□□□□□ -0.66
HCFC1R1-204ENST00000573095 MOBPQ13875 183 aa10.9□□□□□ -0.66
HCFC1R1-204ENST00000573095 Q9BRP9 147 aa10.9□□□□□ -0.66
HCFC1R1-204ENST00000573095 MIEN1Q9BRT3 115 aa10.9□□□□□ -0.66
HCFC1R1-204ENST00000573095 DPM2O94777 84 aa10.89□□□□□ -0.67
HCFC1R1-204ENST00000573095 NDUFC2O95298 119 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms