RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
GTF3C1-211ENST00000569653 TP73-AS1Q9UF72 201 aa8.24□□□□□ -1.09
GTF3C1-211ENST00000569653 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
GTF3C1-211ENST00000569653 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
GTF3C1-211ENST00000569653 PFN2P35080 140 aa8.23□□□□□ -1.09
GTF3C1-211ENST00000569653 ZNF861PO60384 105 aa8.22□□□□□ -1.09
GTF3C1-211ENST00000569653 C3orf79P0CE67 100 aa8.22□□□□□ -1.09
GTF3C1-211ENST00000569653 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
GTF3C1-211ENST00000569653 HIST3H2BBQ8N257 126 aa8.22□□□□□ -1.09
GTF3C1-211ENST00000569653 ZNF625Q96I27 306 aaPredicted RBP8.22□□□□□ -1.09
GTF3C1-211ENST00000569653 PLNP26678 52 aa8.21□□□□□ -1.1
GTF3C1-211ENST00000569653 A0A087X002 238 aa8.2□□□□□ -1.1
GTF3C1-211ENST00000569653 DPM2O94777 84 aa8.2□□□□□ -1.1
GTF3C1-211ENST00000569653 LINC01545Q5VT33 79 aa8.2□□□□□ -1.1
GTF3C1-211ENST00000569653 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
GTF3C1-211ENST00000569653 MUC2Q02817 5179 aa8.19□□□□□ -1.1
GTF3C1-211ENST00000569653 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
GTF3C1-211ENST00000569653 IGKCP01834 107 aa8.19□□□□□ -1.1
GTF3C1-211ENST00000569653 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
GTF3C1-211ENST00000569653 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
GTF3C1-211ENST00000569653 RPL37AP8A6NKH3 93 aa8.18□□□□□ -1.1
GTF3C1-211ENST00000569653 PET117Q6UWS5 81 aa8.18□□□□□ -1.1
GTF3C1-211ENST00000569653 LINC00167Q96N53 147 aa8.18□□□□□ -1.1
GTF3C1-211ENST00000569653 C5orf52A6NGY3 159 aa8.17□□□□□ -1.1
GTF3C1-211ENST00000569653 TSPEAR-AS2P59090 65 aa8.17□□□□□ -1.1
GTF3C1-211ENST00000569653 KRTDAPP60985 99 aa8.17□□□□□ -1.1
GTF3C1-211ENST00000569653 HERVK_113P61574 105 aa8.17□□□□□ -1.1
GTF3C1-211ENST00000569653 SNRPEP62304 92 aaKnown RBP8.17□□□□□ -1.1
GTF3C1-211ENST00000569653 HERV-K104P63124 156 aa8.17□□□□□ -1.1
GTF3C1-211ENST00000569653 GAGE10A6NGK3 116 aa8.16□□□□□ -1.1
GTF3C1-211ENST00000569653 BCE1O60756 84 aa8.16□□□□□ -1.1
GTF3C1-211ENST00000569653 RPL13AP40429 203 aaKnown RBP8.16□□□□□ -1.1
GTF3C1-211ENST00000569653 LINC00158P58513 81 aa8.16□□□□□ -1.1
GTF3C1-211ENST00000569653 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
GTF3C1-211ENST00000569653 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
GTF3C1-211ENST00000569653 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
GTF3C1-211ENST00000569653 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
GTF3C1-211ENST00000569653 LINC00587B1AMM8 73 aa8.15□□□□□ -1.1
GTF3C1-211ENST00000569653 S100A6P06703 90 aa8.15□□□□□ -1.1
GTF3C1-211ENST00000569653 MEIG1Q5JSS6 88 aa8.15□□□□□ -1.1
GTF3C1-211ENST00000569653 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
GTF3C1-211ENST00000569653 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
GTF3C1-211ENST00000569653 LEPROTO15243 131 aa8.14□□□□□ -1.11
GTF3C1-211ENST00000569653 VPREB1P12018 145 aa8.14□□□□□ -1.11
GTF3C1-211ENST00000569653 PRR4Q16378 134 aa8.14□□□□□ -1.11
GTF3C1-211ENST00000569653 Q8NDZ9 215 aa8.14□□□□□ -1.11
GTF3C1-211ENST00000569653 S100A2P29034 98 aa8.13□□□□□ -1.11
GTF3C1-211ENST00000569653 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
GTF3C1-211ENST00000569653 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
GTF3C1-211ENST00000569653 E9PLD3 99 aa8.12□□□□□ -1.11
GTF3C1-211ENST00000569653 J3QQQ9 107 aa8.12□□□□□ -1.11
GTF3C1-211ENST00000569653 TSPAN13O95857 204 aa8.12□□□□□ -1.11
GTF3C1-211ENST00000569653 SMIM13P0DJ93 91 aa8.12□□□□□ -1.11
GTF3C1-211ENST00000569653 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
GTF3C1-211ENST00000569653 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
GTF3C1-211ENST00000569653 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
GTF3C1-211ENST00000569653 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
GTF3C1-211ENST00000569653 NMUP48645 174 aa8.11□□□□□ -1.11
GTF3C1-211ENST00000569653 IGKV2D-26A0A0A0MRZ7 120 aa8.1□□□□□ -1.11
GTF3C1-211ENST00000569653 ATOH7Q8N100 152 aa8.1□□□□□ -1.11
GTF3C1-211ENST00000569653 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
GTF3C1-211ENST00000569653 C20orf202A1L168 122 aa8.08□□□□□ -1.12
GTF3C1-211ENST00000569653 UBE2AP49459 152 aa8.08□□□□□ -1.12
GTF3C1-211ENST00000569653 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
GTF3C1-211ENST00000569653 TMEM238C9JI98 176 aa8.07□□□□□ -1.12
GTF3C1-211ENST00000569653 CRYGAP11844 174 aa8.07□□□□□ -1.12
GTF3C1-211ENST00000569653 PRLHP81277 87 aa8.07□□□□□ -1.12
GTF3C1-211ENST00000569653 ANKRD39Q53RE8 183 aa8.07□□□□□ -1.12
GTF3C1-211ENST00000569653 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
GTF3C1-211ENST00000569653 M0R378 163 aa8.06□□□□□ -1.12
GTF3C1-211ENST00000569653 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
GTF3C1-211ENST00000569653 TMEM126AQ9H061 195 aa8.06□□□□□ -1.12
GTF3C1-211ENST00000569653 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
GTF3C1-211ENST00000569653 A0A0J9YXY3 114 aa8.04□□□□□ -1.12
GTF3C1-211ENST00000569653 NCR3O14931 201 aa8.04□□□□□ -1.12
GTF3C1-211ENST00000569653 FAM19A1Q7Z5A9 133 aa8.04□□□□□ -1.12
GTF3C1-211ENST00000569653 DAND5Q8N907 189 aa8.04□□□□□ -1.12
GTF3C1-211ENST00000569653 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
GTF3C1-211ENST00000569653 MIEN1Q9BRT3 115 aa8.04□□□□□ -1.12
GTF3C1-211ENST00000569653 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
GTF3C1-211ENST00000569653 MUC17Q685J3 4493 aa8.02□□□□□ -1.13
GTF3C1-211ENST00000569653 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
GTF3C1-211ENST00000569653 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
GTF3C1-211ENST00000569653 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
GTF3C1-211ENST00000569653 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
GTF3C1-211ENST00000569653 PRYO14603 147 aa8.01□□□□□ -1.13
GTF3C1-211ENST00000569653 AKR1D1P51857 326 aa8.01□□□□□ -1.13
GTF3C1-211ENST00000569653 S100A12P80511 92 aa8.01□□□□□ -1.13
GTF3C1-211ENST00000569653 PCP2Q8IVA1 136 aa8.01□□□□□ -1.13
GTF3C1-211ENST00000569653 LITAFQ99732 161 aa8.01□□□□□ -1.13
GTF3C1-211ENST00000569653 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
GTF3C1-211ENST00000569653 SCGB1D1O95968 90 aa8□□□□□ -1.13
GTF3C1-211ENST00000569653 SPANXB1Q9NS25 103 aaPredicted RBP8□□□□□ -1.13
GTF3C1-211ENST00000569653 TRBV10-2A0A0K0K1G8 114 aa7.99□□□□□ -1.13
GTF3C1-211ENST00000569653 ZNF815PA8K554 130 aa7.99□□□□□ -1.13
GTF3C1-211ENST00000569653 C3orf22Q8N5N4 141 aa7.99□□□□□ -1.13
GTF3C1-211ENST00000569653 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
GTF3C1-211ENST00000569653 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
GTF3C1-211ENST00000569653 NDUFC2O95298 119 aa7.98□□□□□ -1.13
GTF3C1-211ENST00000569653 SOSTDC1Q6X4U4 206 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms