RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 DNAH11Q96DT5 4516 aa3.8□□□□□ -1.8
SF3B3-210ENST00000567654 DNAH5Q8TE73 4624 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 SACSQ9NZJ4 4579 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 A0A1W2PPM0 123 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 CRPP02741 224 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 C9orf116Q5BN46 136 aaPredicted RBP3.79□□□□□ -1.8
SF3B3-210ENST00000567654 CASC10Q5T4H9 136 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 MIR7-3HGQ8N6C7 128 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 C15orf56Q8N910 161 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 LINC00308Q8TCZ7 52 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 KRTAP1-5Q9BYS1 174 aa3.79□□□□□ -1.8
SF3B3-210ENST00000567654 PFN2P35080 140 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 HERV-K104P63124 156 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 SPAG11BQ08648 103 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 VAMP3Q15836 100 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 HIGD2BQ4VC39 106 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 Q8NDZ9 215 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 UPK3BQ9BT76 320 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 Q9HAA7 133 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 ERG28Q9UKR5 140 aa3.78□□□□□ -1.8
SF3B3-210ENST00000567654 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.81
SF3B3-210ENST00000567654 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 TRAV8-4A0A0B4J246 113 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 A0A0B4J2C4 111 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 IBA57-AS1B1ANH7 110 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 K7EP34 96 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 CCL18P55774 89 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 LINC00158P58513 81 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 RPL24P83731 157 aaKnown RBP3.77□□□□□ -1.81
SF3B3-210ENST00000567654 UBE2V1Q13404 147 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 C6orf226Q5I0X4 101 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 UNQ6190/PRO20217Q6UXQ8 127 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 PRO1854Q9UHT4 67 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 KLK5Q9Y337 293 aaPredicted RBP3.77□□□□□ -1.81
SF3B3-210ENST00000567654 TENM2Q9NT68 2774 aa3.77□□□□□ -1.81
SF3B3-210ENST00000567654 IGKV2-28A0A075B6P5 120 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 KRTAP29-1A8MX34 341 aaPredicted RBP3.76□□□□□ -1.81
SF3B3-210ENST00000567654 USP17L23D6RBM5 183 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 H7C2G1 150 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 IGKV2D-28P01615 120 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 IFITM1P13164 125 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 CIRBPQ14011 172 aaKnown RBP3.76□□□□□ -1.81
SF3B3-210ENST00000567654 CFAP161Q6P656 301 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
SF3B3-210ENST00000567654 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.75□□□□□ -1.81
SF3B3-210ENST00000567654 RPL13AP40429 203 aaKnown RBP3.75□□□□□ -1.81
SF3B3-210ENST00000567654 CXCL5P42830 114 aa3.75□□□□□ -1.81
SF3B3-210ENST00000567654 CKS1BP61024 79 aa3.75□□□□□ -1.81
SF3B3-210ENST00000567654 WFDC2Q14508 124 aa3.75□□□□□ -1.81
SF3B3-210ENST00000567654 Q6ZRU5 148 aa3.75□□□□□ -1.81
SF3B3-210ENST00000567654 MTURNQ8N3F0 131 aa3.75□□□□□ -1.81
SF3B3-210ENST00000567654 LINC00337Q8N6G1 96 aa3.75□□□□□ -1.81
SF3B3-210ENST00000567654 FAT2Q9NYQ8 4349 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 IGLV5-37A0A075B6J1 123 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 GVQW2A0A096LPI5 108 aaPredicted RBP3.74□□□□□ -1.81
SF3B3-210ENST00000567654 LECT2O14960 151 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 TCL1BO95988 128 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 FABP2P12104 132 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 UBE2DNLQ8IWF7 75 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 SND1-IT1Q9HBX3 110 aa3.74□□□□□ -1.81
SF3B3-210ENST00000567654 LOC107984156A0A0G2JMH3 177 aa3.73□□□□□ -1.81
SF3B3-210ENST00000567654 NUPR2A6NF83 97 aa3.73□□□□□ -1.81
SF3B3-210ENST00000567654 PRR3P79522 188 aaKnown RBP3.73□□□□□ -1.81
SF3B3-210ENST00000567654 ARL17AQ8IVW1 177 aa3.73□□□□□ -1.81
SF3B3-210ENST00000567654 PRO0461Q9UI25 63 aa3.73□□□□□ -1.81
SF3B3-210ENST00000567654 PKD1P98161 4303 aa3.72□□□□□ -1.81
SF3B3-210ENST00000567654 H3BMG7 143 aa3.72□□□□□ -1.81
SF3B3-210ENST00000567654 PSMB2P49721 201 aa3.72□□□□□ -1.81
SF3B3-210ENST00000567654 Q1RN00 199 aa3.72□□□□□ -1.81
SF3B3-210ENST00000567654 CLEC2BQ92478 149 aa3.72□□□□□ -1.81
SF3B3-210ENST00000567654 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
SF3B3-210ENST00000567654 CAMK2N2Q96S95 79 aa3.72□□□□□ -1.81
SF3B3-210ENST00000567654 TGP01266 2768 aa3.71□□□□□ -1.82
SF3B3-210ENST00000567654 TRBV30A0A0K0K1B3 111 aa3.71□□□□□ -1.82
SF3B3-210ENST00000567654 NCR3O14931 201 aa3.71□□□□□ -1.82
SF3B3-210ENST00000567654 COX17Q14061 63 aa3.71□□□□□ -1.82
SF3B3-210ENST00000567654 GTF2H5Q6ZYL4 71 aa3.71□□□□□ -1.82
SF3B3-210ENST00000567654 XAGE1AQ9HD64 81 aa3.71□□□□□ -1.82
SF3B3-210ENST00000567654 NBDYA0A0U1RRE5 68 aa3.7□□□□□ -1.82
SF3B3-210ENST00000567654 SYCNQ0VAF6 134 aa3.7□□□□□ -1.82
SF3B3-210ENST00000567654 C9orf129Q5T035 196 aaKnown RBP3.7□□□□□ -1.82
SF3B3-210ENST00000567654 Q6ZRN7 208 aaPredicted RBP3.7□□□□□ -1.82
SF3B3-210ENST00000567654 Q6ZRP5 223 aa3.7□□□□□ -1.82
SF3B3-210ENST00000567654 SMIM11BQ8TCY0 68 aa3.7□□□□□ -1.82
SF3B3-210ENST00000567654 FAM218AQ96MZ4 157 aa3.7□□□□□ -1.82
SF3B3-210ENST00000567654 TRAV13-2A0A0B4J235 113 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 M0R2N4 97 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 NDUFC2O95298 119 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 VPREB1P12018 145 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 RPL28P46779 137 aaKnown RBP3.69□□□□□ -1.82
SF3B3-210ENST00000567654 SEC61BP60468 96 aaKnown RBP3.69□□□□□ -1.82
SF3B3-210ENST00000567654 GAGE2EQ4V326 116 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 COPS9Q8WXC6 57 aa3.69□□□□□ -1.82
SF3B3-210ENST00000567654 RMI2Q96E14 147 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 288.9 ms