RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 C7orf33Q8WU49 177 aa10.52□□□□□ -0.73
CLN6-208ENST00000567060 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
CLN6-208ENST00000567060 TP73-AS1Q9UF72 201 aa10.51□□□□□ -0.73
CLN6-208ENST00000567060 IGKV2D-26A0A0A0MRZ7 120 aa10.5□□□□□ -0.73
CLN6-208ENST00000567060 A0A1W2PNN7 141 aa10.5□□□□□ -0.73
CLN6-208ENST00000567060 ZNF815PA8K554 130 aa10.5□□□□□ -0.73
CLN6-208ENST00000567060 TIMM17BO60830 172 aa10.5□□□□□ -0.73
CLN6-208ENST00000567060 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
CLN6-208ENST00000567060 SND1-IT1Q9HBX3 110 aa10.5□□□□□ -0.73
CLN6-208ENST00000567060 A0A0J9YXY3 114 aa10.49□□□□□ -0.73
CLN6-208ENST00000567060 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
CLN6-208ENST00000567060 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
CLN6-208ENST00000567060 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
CLN6-208ENST00000567060 PLA2G1BP04054 148 aaKnown RBP10.48□□□□□ -0.73
CLN6-208ENST00000567060 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
CLN6-208ENST00000567060 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
CLN6-208ENST00000567060 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
CLN6-208ENST00000567060 LBHQ53QV2 105 aaPredicted RBP10.47□□□□□ -0.73
CLN6-208ENST00000567060 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
CLN6-208ENST00000567060 M0QXV9 152 aa10.46□□□□□ -0.73
CLN6-208ENST00000567060 FAM19A5Q7Z5A7 132 aaPredicted RBP10.46□□□□□ -0.73
CLN6-208ENST00000567060 FAM168BA1KXE4 195 aa10.45□□□□□ -0.74
CLN6-208ENST00000567060 A0A0U1RRA0 63 aa10.44□□□□□ -0.74
CLN6-208ENST00000567060 TMEM238C9JI98 176 aa10.44□□□□□ -0.74
CLN6-208ENST00000567060 SERTAD4-AS1Q5TG53 156 aa10.44□□□□□ -0.74
CLN6-208ENST00000567060 SCGB1D4Q6XE38 83 aa10.44□□□□□ -0.74
CLN6-208ENST00000567060 Q6ZVH6 145 aa10.44□□□□□ -0.74
CLN6-208ENST00000567060 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
CLN6-208ENST00000567060 MIEN1Q9BRT3 115 aa10.44□□□□□ -0.74
CLN6-208ENST00000567060 NKAPP1Q8N9T2 125 aa10.43□□□□□ -0.74
CLN6-208ENST00000567060 COPS9Q8WXC6 57 aa10.43□□□□□ -0.74
CLN6-208ENST00000567060 PPDPFQ9H3Y8 114 aa10.43□□□□□ -0.74
CLN6-208ENST00000567060 C22orf24Q9Y442 160 aa10.43□□□□□ -0.74
CLN6-208ENST00000567060 VPREB1P12018 145 aa10.42□□□□□ -0.74
CLN6-208ENST00000567060 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
CLN6-208ENST00000567060 MRPL55Q7Z7F7 128 aaKnown RBP10.42□□□□□ -0.74
CLN6-208ENST00000567060 PCP2Q8IVA1 136 aa10.42□□□□□ -0.74
CLN6-208ENST00000567060 VAMP8Q9BV40 100 aa10.42□□□□□ -0.74
CLN6-208ENST00000567060 PKHD1L1Q86WI1 4243 aa10.41□□□□□ -0.74
CLN6-208ENST00000567060 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
CLN6-208ENST00000567060 LITAFQ99732 161 aa10.41□□□□□ -0.74
CLN6-208ENST00000567060 TTTY13Q9BZ97 58 aa10.41□□□□□ -0.74
CLN6-208ENST00000567060 DLEU1O43261 78 aa10.4□□□□□ -0.74
CLN6-208ENST00000567060 NDUFC2O95298 119 aa10.4□□□□□ -0.74
CLN6-208ENST00000567060 PYY3Q5JQD4 70 aa10.4□□□□□ -0.74
CLN6-208ENST00000567060 SPANXDQ9BXN6 97 aa10.4□□□□□ -0.74
CLN6-208ENST00000567060 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
CLN6-208ENST00000567060 COX8AP10176 69 aa10.39□□□□□ -0.75
CLN6-208ENST00000567060 UBE2BP63146 152 aa10.39□□□□□ -0.75
CLN6-208ENST00000567060 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
CLN6-208ENST00000567060 IFITM1P13164 125 aa10.38□□□□□ -0.75
CLN6-208ENST00000567060 ADAMTSL4-AS1Q5T5F5 129 aa10.38□□□□□ -0.75
CLN6-208ENST00000567060 TRBV10-2A0A0K0K1G8 114 aa10.37□□□□□ -0.75
CLN6-208ENST00000567060 M0R378 163 aa10.37□□□□□ -0.75
CLN6-208ENST00000567060 KRTAP10-4P60372 401 aaPredicted RBP10.37□□□□□ -0.75
CLN6-208ENST00000567060 SPATA45Q537H7 98 aa10.37□□□□□ -0.75
CLN6-208ENST00000567060 DAND5Q8N907 189 aa10.37□□□□□ -0.75
CLN6-208ENST00000567060 PAM16Q9Y3D7 125 aa10.37□□□□□ -0.75
CLN6-208ENST00000567060 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
CLN6-208ENST00000567060 LINC00308Q8TCZ7 52 aa10.36□□□□□ -0.75
CLN6-208ENST00000567060 LINC00167Q96N53 147 aa10.36□□□□□ -0.75
CLN6-208ENST00000567060 SPANXB1Q9NS25 103 aaPredicted RBP10.36□□□□□ -0.75
CLN6-208ENST00000567060 S100A12P80511 92 aa10.34□□□□□ -0.75
CLN6-208ENST00000567060 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
CLN6-208ENST00000567060 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
CLN6-208ENST00000567060 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
CLN6-208ENST00000567060 SLC25A34Q6PIV7 304 aa10.32□□□□□ -0.76
CLN6-208ENST00000567060 SOSTDC1Q6X4U4 206 aa10.32□□□□□ -0.76
CLN6-208ENST00000567060 LINC00518Q8N0U6 118 aa10.32□□□□□ -0.76
CLN6-208ENST00000567060 Q8NDZ9 215 aa10.32□□□□□ -0.76
CLN6-208ENST00000567060 OXTP01178 125 aa10.31□□□□□ -0.76
CLN6-208ENST00000567060 HIGD1BQ9P298 99 aa10.31□□□□□ -0.76
CLN6-208ENST00000567060 RNF213Q63HN8 5207 aa10.3□□□□□ -0.76
CLN6-208ENST00000567060 SRSF9Q13242 221 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLN6-208ENST00000567060 C1orf137Q5JT78 98 aa10.3□□□□□ -0.76
CLN6-208ENST00000567060 GAGE10A6NGK3 116 aa10.29□□□□□ -0.76
CLN6-208ENST00000567060 SMIM6P0DI80 62 aa10.29□□□□□ -0.76
CLN6-208ENST00000567060 C14orf144Q96I85 54 aa10.29□□□□□ -0.76
CLN6-208ENST00000567060 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
CLN6-208ENST00000567060 NPC2P61916 151 aa10.28□□□□□ -0.76
CLN6-208ENST00000567060 LRP2P98164 4655 aa10.27□□□□□ -0.77
CLN6-208ENST00000567060 PRYO14603 147 aa10.27□□□□□ -0.77
CLN6-208ENST00000567060 NCR3O14931 201 aa10.27□□□□□ -0.77
CLN6-208ENST00000567060 IGLV7-43P04211 117 aa10.27□□□□□ -0.77
CLN6-208ENST00000567060 SPINK6Q6UWN8 80 aa10.27□□□□□ -0.77
CLN6-208ENST00000567060 KRTAP11-1Q8IUC1 163 aa10.27□□□□□ -0.77
CLN6-208ENST00000567060 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
CLN6-208ENST00000567060 EIF4EBP3O60516 100 aaPredicted RBP10.26□□□□□ -0.77
CLN6-208ENST00000567060 BCE1O60756 84 aa10.26□□□□□ -0.77
CLN6-208ENST00000567060 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
CLN6-208ENST00000567060 S100A7L2Q5SY68 101 aa10.26□□□□□ -0.77
CLN6-208ENST00000567060 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
CLN6-208ENST00000567060 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
CLN6-208ENST00000567060 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
CLN6-208ENST00000567060 IGLV6-57P01721 117 aa10.25□□□□□ -0.77
CLN6-208ENST00000567060 DDTP30046 118 aa10.25□□□□□ -0.77
CLN6-208ENST00000567060 TMEM126AQ9H061 195 aa10.25□□□□□ -0.77
CLN6-208ENST00000567060 TNXBP22105 4242 aa10.25□□□□□ -0.77
CLN6-208ENST00000567060 TAL2Q16559 108 aa10.24□□□□□ -0.77
CLN6-208ENST00000567060 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms