RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 COX17Q14061 63 aa11.59□□□□□ -0.55
HERC2-208ENST00000566635 TRBV30A0A0K0K1B3 111 aa11.58□□□□□ -0.56
HERC2-208ENST00000566635 CFC1BP0CG36 223 aa11.58□□□□□ -0.56
HERC2-208ENST00000566635 CFC1P0CG37 223 aa11.58□□□□□ -0.56
HERC2-208ENST00000566635 SYCNQ0VAF6 134 aa11.58□□□□□ -0.56
HERC2-208ENST00000566635 CDIP1Q9H305 208 aa11.57□□□□□ -0.56
HERC2-208ENST00000566635 CARD19Q96LW7 228 aa11.56□□□□□ -0.56
HERC2-208ENST00000566635 F8WDY8 70 aa11.55□□□□□ -0.56
HERC2-208ENST00000566635 COPS9Q8WXC6 57 aa11.55□□□□□ -0.56
HERC2-208ENST00000566635 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
HERC2-208ENST00000566635 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.54□□□□□ -0.56
HERC2-208ENST00000566635 LRCOL1A6NCL2 159 aa11.53□□□□□ -0.56
HERC2-208ENST00000566635 SMCPP49901 116 aaPredicted RBP11.53□□□□□ -0.56
HERC2-208ENST00000566635 A0A0B4J2C4 111 aa11.53□□□□□ -0.56
HERC2-208ENST00000566635 TSPAN13O95857 204 aa11.53□□□□□ -0.56
HERC2-208ENST00000566635 PPDPFQ9H3Y8 114 aa11.53□□□□□ -0.56
HERC2-208ENST00000566635 HYDINQ4G0P3 5121 aa11.51□□□□□ -0.57
HERC2-208ENST00000566635 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.5□□□□□ -0.57
HERC2-208ENST00000566635 XAGE1AQ9HD64 81 aa11.5□□□□□ -0.57
HERC2-208ENST00000566635 PGPEP1Q9NXJ5 209 aa11.5□□□□□ -0.57
HERC2-208ENST00000566635 PRO1854Q9UHT4 67 aa11.5□□□□□ -0.57
HERC2-208ENST00000566635 NDUFC2-KCTD14E9PQ53 114 aa11.5□□□□□ -0.57
HERC2-208ENST00000566635 Q8NDZ9 215 aa11.5□□□□□ -0.57
HERC2-208ENST00000566635 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
HERC2-208ENST00000566635 Q6ZRP5 223 aa11.49□□□□□ -0.57
HERC2-208ENST00000566635 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
HERC2-208ENST00000566635 SACSQ9NZJ4 4579 aa11.49□□□□□ -0.57
HERC2-208ENST00000566635 IGKV2-28A0A075B6P5 120 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 IGKV2D-28P01615 120 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 PPDPFLQ8WWR9 84 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 DNAH17Q9UFH2 4485 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 H7C2G1 150 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 GAGE2EQ4V326 116 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 LYRM7Q5U5X0 104 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 GAGE2DQ9UEU5 116 aa11.48□□□□□ -0.57
HERC2-208ENST00000566635 FRAS1Q86XX4 4008 aa11.47□□□□□ -0.57
HERC2-208ENST00000566635 C1orf134Q5TEV5 83 aa11.47□□□□□ -0.57
HERC2-208ENST00000566635 TEN1Q86WV5 123 aa11.47□□□□□ -0.57
HERC2-208ENST00000566635 MT-ATP8P03928 68 aa11.47□□□□□ -0.57
HERC2-208ENST00000566635 XGP55808 180 aa11.47□□□□□ -0.57
HERC2-208ENST00000566635 RPL18AQ02543 176 aaKnown RBP11.47□□□□□ -0.57
HERC2-208ENST00000566635 RPL13AP40429 203 aaKnown RBP11.46□□□□□ -0.57
HERC2-208ENST00000566635 CNBPP62633 177 aaKnown RBP11.46□□□□□ -0.57
HERC2-208ENST00000566635 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.57
HERC2-208ENST00000566635 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
HERC2-208ENST00000566635 TLX1NBP0CAT3 122 aa11.45□□□□□ -0.58
HERC2-208ENST00000566635 TRBV20-1A0A075B6N2 111 aa11.44□□□□□ -0.58
HERC2-208ENST00000566635 A0A087WTM6 91 aa11.44□□□□□ -0.58
HERC2-208ENST00000566635 M0QXV9 152 aa11.44□□□□□ -0.58
HERC2-208ENST00000566635 Q1RN00 199 aa11.44□□□□□ -0.58
HERC2-208ENST00000566635 Q8N814 137 aa11.44□□□□□ -0.58
HERC2-208ENST00000566635 NCR3O14931 201 aa11.43□□□□□ -0.58
HERC2-208ENST00000566635 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
HERC2-208ENST00000566635 HECTD4Q9Y4D8 3996 aa11.42□□□□□ -0.58
HERC2-208ENST00000566635 NDUFC2O95298 119 aa11.42□□□□□ -0.58
HERC2-208ENST00000566635 PSMB2P49721 201 aa11.41□□□□□ -0.58
HERC2-208ENST00000566635 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
HERC2-208ENST00000566635 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
HERC2-208ENST00000566635 LOC107984640A0A0U1RRK4 108 aa11.4□□□□□ -0.58
HERC2-208ENST00000566635 FUSP35637 526 aaKnown RBP eCLIP11.38□□□□□ -0.59
HERC2-208ENST00000566635 LINC01620Q4KN68 170 aa11.38□□□□□ -0.59
HERC2-208ENST00000566635 OR13C6PQ8NH95 151 aa11.38□□□□□ -0.59
HERC2-208ENST00000566635 TCL1BO95988 128 aa11.38□□□□□ -0.59
HERC2-208ENST00000566635 VPREB1P12018 145 aa11.38□□□□□ -0.59
HERC2-208ENST00000566635 RTL8CO15255 209 aa11.37□□□□□ -0.59
HERC2-208ENST00000566635 TRIAP1O43715 76 aa11.37□□□□□ -0.59
HERC2-208ENST00000566635 TNP2Q05952 138 aa11.36□□□□□ -0.59
HERC2-208ENST00000566635 LINC01600Q96MT4 127 aa11.36□□□□□ -0.59
HERC2-208ENST00000566635 ANAPC13Q9BS18 74 aa11.36□□□□□ -0.59
HERC2-208ENST00000566635 A0A096LNI7 61 aa11.36□□□□□ -0.59
HERC2-208ENST00000566635 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
HERC2-208ENST00000566635 FAT2Q9NYQ8 4349 aa11.36□□□□□ -0.59
HERC2-208ENST00000566635 LCE6AA0A183 80 aa11.35□□□□□ -0.59
HERC2-208ENST00000566635 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
HERC2-208ENST00000566635 SERTAD4-AS1Q5TG53 156 aa11.35□□□□□ -0.59
HERC2-208ENST00000566635 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
HERC2-208ENST00000566635 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
HERC2-208ENST00000566635 ANKRD29Q8N6D5 301 aa11.34□□□□□ -0.59
HERC2-208ENST00000566635 SMIM11BQ8TCY0 68 aa11.33□□□□□ -0.6
HERC2-208ENST00000566635 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
HERC2-208ENST00000566635 C16orf90A8MZG2 172 aa11.32□□□□□ -0.6
HERC2-208ENST00000566635 SCGB1C2P0DMR2 95 aa11.32□□□□□ -0.6
HERC2-208ENST00000566635 S100A7L2Q5SY68 101 aa11.32□□□□□ -0.6
HERC2-208ENST00000566635 Q6Q795 121 aa11.32□□□□□ -0.6
HERC2-208ENST00000566635 KRTAP7-1Q8IUC3 87 aa11.32□□□□□ -0.6
HERC2-208ENST00000566635 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
HERC2-208ENST00000566635 FAM19A5Q7Z5A7 132 aaPredicted RBP11.3□□□□□ -0.6
HERC2-208ENST00000566635 TMEM126AQ9H061 195 aa11.3□□□□□ -0.6
HERC2-208ENST00000566635 PLA2G2DQ9UNK4 145 aa11.3□□□□□ -0.6
HERC2-208ENST00000566635 KMT2CQ8NEZ4 4911 aaKnown RBP11.29□□□□□ -0.6
HERC2-208ENST00000566635 TRBV10-3A0A0K0K1G6 114 aa11.29□□□□□ -0.6
HERC2-208ENST00000566635 SLC25A20O43772 301 aa11.29□□□□□ -0.6
HERC2-208ENST00000566635 RPL28P46779 137 aaKnown RBP11.29□□□□□ -0.6
HERC2-208ENST00000566635 SDIM1Q6ZPB5 146 aa11.29□□□□□ -0.6
HERC2-208ENST00000566635 IGLV6-57P01721 117 aa11.29□□□□□ -0.6
HERC2-208ENST00000566635 DNAH5Q8TE73 4624 aa11.28□□□□□ -0.6
HERC2-208ENST00000566635 M0R378 163 aa11.28□□□□□ -0.6
HERC2-208ENST00000566635 NKAPP1Q8N9T2 125 aa11.28□□□□□ -0.6
HERC2-208ENST00000566635 SS18L2Q9UHA2 77 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms