RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 hADV29S1A0JD25 119 aa9.68□□□□□ -0.86
CDH1-209ENST00000566510 TRRAPQ9Y4A5 3859 aa9.67□□□□□ -0.86
CDH1-209ENST00000566510 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
CDH1-209ENST00000566510 LAMTOR3Q9UHA4 124 aa9.66□□□□□ -0.86
CDH1-209ENST00000566510 LINC00575Q6W349 94 aa9.65□□□□□ -0.86
CDH1-209ENST00000566510 OTOGQ6ZRI0 2925 aa9.65□□□□□ -0.86
CDH1-209ENST00000566510 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.87
CDH1-209ENST00000566510 HIVEP1P15822 2718 aa9.64□□□□□ -0.87
CDH1-209ENST00000566510 Q8NAQ8 132 aa9.64□□□□□ -0.87
CDH1-209ENST00000566510 LELP1Q5T871 98 aa9.64□□□□□ -0.87
CDH1-209ENST00000566510 XAGE1AQ9HD64 81 aa9.64□□□□□ -0.87
CDH1-209ENST00000566510 TEP1Q99973 2627 aaKnown RBP9.63□□□□□ -0.87
CDH1-209ENST00000566510 RBM3P98179 157 aaKnown RBP9.63□□□□□ -0.87
CDH1-209ENST00000566510 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
CDH1-209ENST00000566510 UBL5Q9BZL1 73 aa9.63□□□□□ -0.87
CDH1-209ENST00000566510 J3QKU1 62 aa9.63□□□□□ -0.87
CDH1-209ENST00000566510 CRYGAP11844 174 aa9.63□□□□□ -0.87
CDH1-209ENST00000566510 MIFP14174 115 aa9.63□□□□□ -0.87
CDH1-209ENST00000566510 SERP2Q8N6R1 65 aa9.62□□□□□ -0.87
CDH1-209ENST00000566510 CYSTM1Q9H1C7 97 aa9.62□□□□□ -0.87
CDH1-209ENST00000566510 NSD1Q96L73 2696 aaPredicted RBP9.62□□□□□ -0.87
CDH1-209ENST00000566510 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
CDH1-209ENST00000566510 INAFM1C9JVW0 142 aa9.62□□□□□ -0.87
CDH1-209ENST00000566510 FAM19A1Q7Z5A9 133 aa9.62□□□□□ -0.87
CDH1-209ENST00000566510 Q6ZQY7 126 aa9.61□□□□□ -0.87
CDH1-209ENST00000566510 A0A0J9YWU9 116 aa9.6□□□□□ -0.87
CDH1-209ENST00000566510 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
CDH1-209ENST00000566510 IGHV4-30-4P0DP06 118 aa9.6□□□□□ -0.87
CDH1-209ENST00000566510 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
CDH1-209ENST00000566510 ZNF561-AS1K7EIQ3 104 aa9.59□□□□□ -0.87
CDH1-209ENST00000566510 IGLV6-57P01721 117 aa9.59□□□□□ -0.88
CDH1-209ENST00000566510 HIGD2BQ4VC39 106 aa9.59□□□□□ -0.88
CDH1-209ENST00000566510 PRR34Q9NV39 138 aa9.59□□□□□ -0.88
CDH1-209ENST00000566510 C6orf48Q9UBA6 75 aa9.59□□□□□ -0.88
CDH1-209ENST00000566510 DSCR8Q96T75 97 aa9.58□□□□□ -0.88
CDH1-209ENST00000566510 PKD1L1Q8TDX9 2849 aa9.58□□□□□ -0.88
CDH1-209ENST00000566510 Q6ZQT0 140 aa9.58□□□□□ -0.88
CDH1-209ENST00000566510 M0R2N4 97 aa9.57□□□□□ -0.88
CDH1-209ENST00000566510 GHRHP01286 108 aa9.57□□□□□ -0.88
CDH1-209ENST00000566510 ATP5EP2Q5VTU8 51 aa9.57□□□□□ -0.88
CDH1-209ENST00000566510 LYPD5Q6UWN5 251 aa9.57□□□□□ -0.88
CDH1-209ENST00000566510 UPK3BQ9BT76 320 aa9.57□□□□□ -0.88
CDH1-209ENST00000566510 HAMPP81172 84 aa9.56□□□□□ -0.88
CDH1-209ENST00000566510 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
CDH1-209ENST00000566510 MUC7Q8TAX7 377 aa9.55□□□□□ -0.88
CDH1-209ENST00000566510 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
CDH1-209ENST00000566510 WFDC10BQ8IUB3 73 aa9.54□□□□□ -0.88
CDH1-209ENST00000566510 ZNF73O43830 326 aaPredicted RBP9.53□□□□□ -0.88
CDH1-209ENST00000566510 J3KT08 172 aa9.53□□□□□ -0.88
CDH1-209ENST00000566510 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.89
CDH1-209ENST00000566510 GVQW2A0A096LPI5 108 aaPredicted RBP9.52□□□□□ -0.89
CDH1-209ENST00000566510 COX7BP24311 80 aa9.51□□□□□ -0.89
CDH1-209ENST00000566510 RETNQ9HD89 108 aa9.51□□□□□ -0.89
CDH1-209ENST00000566510 LINC01547P58512 204 aaPredicted RBP9.5□□□□□ -0.89
CDH1-209ENST00000566510 KPRPQ5T749 579 aaPredicted RBP9.5□□□□□ -0.89
CDH1-209ENST00000566510 Q6ZVQ6 151 aa9.5□□□□□ -0.89
CDH1-209ENST00000566510 TMEM258P61165 79 aa9.49□□□□□ -0.89
CDH1-209ENST00000566510 Q6ZRU5 148 aa9.49□□□□□ -0.89
CDH1-209ENST00000566510 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
CDH1-209ENST00000566510 Q6ZTC4 211 aa9.47□□□□□ -0.89
CDH1-209ENST00000566510 SCXQ7RTU7 201 aa9.47□□□□□ -0.89
CDH1-209ENST00000566510 ELOF1P60002 83 aaKnown RBP9.47□□□□□ -0.89
CDH1-209ENST00000566510 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.47□□□□□ -0.89
CDH1-209ENST00000566510 FAM19A5Q7Z5A7 132 aaPredicted RBP9.47□□□□□ -0.89
CDH1-209ENST00000566510 VPREB1P12018 145 aa9.46□□□□□ -0.89
CDH1-209ENST00000566510 PDE6GP18545 87 aa9.46□□□□□ -0.89
CDH1-209ENST00000566510 OXLD1Q5BKU9 147 aa9.46□□□□□ -0.89
CDH1-209ENST00000566510 DPH3Q96FX2 82 aa9.46□□□□□ -0.89
CDH1-209ENST00000566510 H3BQ85 93 aa9.45□□□□□ -0.9
CDH1-209ENST00000566510 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
CDH1-209ENST00000566510 KMT2BQ9UMN6 2715 aaPredicted RBP9.44□□□□□ -0.9
CDH1-209ENST00000566510 M0R378 163 aa9.44□□□□□ -0.9
CDH1-209ENST00000566510 IGKV2D-24A0A075B6R9 120 aa9.44□□□□□ -0.9
CDH1-209ENST00000566510 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
CDH1-209ENST00000566510 C15orf56Q8N910 161 aa9.43□□□□□ -0.9
CDH1-209ENST00000566510 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
CDH1-209ENST00000566510 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
CDH1-209ENST00000566510 ESRGQ1W209 222 aa9.43□□□□□ -0.9
CDH1-209ENST00000566510 TRAV10A0A0B4J240 114 aa9.42□□□□□ -0.9
CDH1-209ENST00000566510 RPS28P62857 69 aaKnown RBP9.42□□□□□ -0.9
CDH1-209ENST00000566510 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
CDH1-209ENST00000566510 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
CDH1-209ENST00000566510 Q6ZRP5 223 aa9.41□□□□□ -0.9
CDH1-209ENST00000566510 CXCL6P80162 114 aa9.4□□□□□ -0.9
CDH1-209ENST00000566510 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.9
CDH1-209ENST00000566510 ANK2Q01484 3957 aa9.4□□□□□ -0.91
CDH1-209ENST00000566510 TRBV7-6A0A0J9YX20 115 aa9.39□□□□□ -0.91
CDH1-209ENST00000566510 TRAV7A0A075B6U4 112 aa9.38□□□□□ -0.91
CDH1-209ENST00000566510 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
CDH1-209ENST00000566510 H3BNG1 76 aa9.38□□□□□ -0.91
CDH1-209ENST00000566510 KRTAP10-11P60412 298 aa9.38□□□□□ -0.91
CDH1-209ENST00000566510 NKAPP1Q8N9T2 125 aa9.38□□□□□ -0.91
CDH1-209ENST00000566510 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
CDH1-209ENST00000566510 FLNBO75369 2602 aaKnown RBP9.37□□□□□ -0.91
CDH1-209ENST00000566510 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
CDH1-209ENST00000566510 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
CDH1-209ENST00000566510 DEFB131BA0A096LNP1 70 aa9.36□□□□□ -0.91
CDH1-209ENST00000566510 WIPF1O43516 503 aa9.36□□□□□ -0.91
CDH1-209ENST00000566510 OXTP01178 125 aa9.36□□□□□ -0.91
CDH1-209ENST00000566510 Q8N9L7 120 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms