RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 C5orf52A6NGY3 159 aa9.93□□□□□ -0.82
RAB40C-208ENST00000564703 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
RAB40C-208ENST00000564703 MRPL55Q7Z7F7 128 aaKnown RBP9.93□□□□□ -0.82
RAB40C-208ENST00000564703 TP73-AS1Q9UF72 201 aa9.93□□□□□ -0.82
RAB40C-208ENST00000564703 SRRM2Q9UQ35 2752 aaKnown RBP9.93□□□□□ -0.82
RAB40C-208ENST00000564703 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
RAB40C-208ENST00000564703 C1orf137Q5JT78 98 aa9.91□□□□□ -0.82
RAB40C-208ENST00000564703 ATOH7Q8N100 152 aa9.91□□□□□ -0.82
RAB40C-208ENST00000564703 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
RAB40C-208ENST00000564703 IGLV5-37A0A075B6J1 123 aa9.89□□□□□ -0.83
RAB40C-208ENST00000564703 HSBP1L1C9JCN9 74 aa9.89□□□□□ -0.83
RAB40C-208ENST00000564703 LINC00167Q96N53 147 aa9.89□□□□□ -0.83
RAB40C-208ENST00000564703 GAGE10A6NGK3 116 aa9.88□□□□□ -0.83
RAB40C-208ENST00000564703 ZNF815PA8K554 130 aa9.88□□□□□ -0.83
RAB40C-208ENST00000564703 SCGB1D1O95968 90 aa9.88□□□□□ -0.83
RAB40C-208ENST00000564703 MIEN1Q9BRT3 115 aa9.88□□□□□ -0.83
RAB40C-208ENST00000564703 FAT1Q14517 4588 aa9.88□□□□□ -0.83
RAB40C-208ENST00000564703 PCLOQ9Y6V0 5065 aa9.88□□□□□ -0.83
RAB40C-208ENST00000564703 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
RAB40C-208ENST00000564703 A0A0J9YXY3 114 aa9.87□□□□□ -0.83
RAB40C-208ENST00000564703 RPL37AP8A6NKH3 93 aa9.87□□□□□ -0.83
RAB40C-208ENST00000564703 VPREB1P12018 145 aa9.87□□□□□ -0.83
RAB40C-208ENST00000564703 BOD1L2Q8IYS8 172 aa9.87□□□□□ -0.83
RAB40C-208ENST00000564703 TMA7Q9Y2S6 64 aaKnown RBP9.87□□□□□ -0.83
RAB40C-208ENST00000564703 SPINK6Q6UWN8 80 aa9.86□□□□□ -0.83
RAB40C-208ENST00000564703 HNRNPA3P51991 378 aaKnown RBP9.85□□□□□ -0.83
RAB40C-208ENST00000564703 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
RAB40C-208ENST00000564703 DAND5Q8N907 189 aa9.85□□□□□ -0.83
RAB40C-208ENST00000564703 FLG2Q5D862 2391 aaPredicted RBP9.85□□□□□ -0.83
RAB40C-208ENST00000564703 ABCA13Q86UQ4 5058 aa9.84□□□□□ -0.83
RAB40C-208ENST00000564703 M0R378 163 aa9.84□□□□□ -0.83
RAB40C-208ENST00000564703 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
RAB40C-208ENST00000564703 ANKRD39Q53RE8 183 aa9.84□□□□□ -0.83
RAB40C-208ENST00000564703 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
RAB40C-208ENST00000564703 TIMM17BO60830 172 aa9.83□□□□□ -0.84
RAB40C-208ENST00000564703 TTTY13Q9BZ97 58 aa9.83□□□□□ -0.84
RAB40C-208ENST00000564703 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
RAB40C-208ENST00000564703 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
RAB40C-208ENST00000564703 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
RAB40C-208ENST00000564703 IGKV2-28A0A075B6P5 120 aa9.81□□□□□ -0.84
RAB40C-208ENST00000564703 IGKV2D-28P01615 120 aa9.81□□□□□ -0.84
RAB40C-208ENST00000564703 ADAMTSL4-AS1Q5T5F5 129 aa9.81□□□□□ -0.84
RAB40C-208ENST00000564703 IGLV1-50A0A075B6I6 118 aa9.8□□□□□ -0.84
RAB40C-208ENST00000564703 J3QL48 77 aa9.8□□□□□ -0.84
RAB40C-208ENST00000564703 OXTP01178 125 aa9.8□□□□□ -0.84
RAB40C-208ENST00000564703 S100A12P80511 92 aa9.8□□□□□ -0.84
RAB40C-208ENST00000564703 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
RAB40C-208ENST00000564703 DIRC1Q969H9 104 aa9.8□□□□□ -0.84
RAB40C-208ENST00000564703 NCR3O14931 201 aa9.79□□□□□ -0.84
RAB40C-208ENST00000564703 NPC2P61916 151 aa9.79□□□□□ -0.84
RAB40C-208ENST00000564703 Q8NDZ9 215 aa9.79□□□□□ -0.84
RAB40C-208ENST00000564703 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
RAB40C-208ENST00000564703 TMEM238C9JI98 176 aa9.78□□□□□ -0.84
RAB40C-208ENST00000564703 BCE1O60756 84 aa9.78□□□□□ -0.84
RAB40C-208ENST00000564703 PCP2Q8IVA1 136 aa9.78□□□□□ -0.84
RAB40C-208ENST00000564703 COPS9Q8WXC6 57 aa9.78□□□□□ -0.84
RAB40C-208ENST00000564703 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
RAB40C-208ENST00000564703 NDUFC2O95298 119 aa9.77□□□□□ -0.85
RAB40C-208ENST00000564703 RPL28P46779 137 aaKnown RBP9.77□□□□□ -0.85
RAB40C-208ENST00000564703 TRBV10-2A0A0K0K1G8 114 aa9.76□□□□□ -0.85
RAB40C-208ENST00000564703 ZNF861PO60384 105 aa9.76□□□□□ -0.85
RAB40C-208ENST00000564703 UBE2AP49459 152 aa9.76□□□□□ -0.85
RAB40C-208ENST00000564703 LINC00308Q8TCZ7 52 aa9.76□□□□□ -0.85
RAB40C-208ENST00000564703 LITAFQ99732 161 aa9.76□□□□□ -0.85
RAB40C-208ENST00000564703 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
RAB40C-208ENST00000564703 SPANXB1Q9NS25 103 aaPredicted RBP9.75□□□□□ -0.85
RAB40C-208ENST00000564703 Q6ZVH6 145 aa9.74□□□□□ -0.85
RAB40C-208ENST00000564703 TMEM126AQ9H061 195 aa9.74□□□□□ -0.85
RAB40C-208ENST00000564703 H0Y9J4 135 aa9.73□□□□□ -0.85
RAB40C-208ENST00000564703 JOSD1Q15040 202 aaPredicted RBP9.73□□□□□ -0.85
RAB40C-208ENST00000564703 SOSTDC1Q6X4U4 206 aa9.73□□□□□ -0.85
RAB40C-208ENST00000564703 FAM19A1Q7Z5A9 133 aa9.73□□□□□ -0.85
RAB40C-208ENST00000564703 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
RAB40C-208ENST00000564703 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
RAB40C-208ENST00000564703 IFITM1P13164 125 aa9.72□□□□□ -0.85
RAB40C-208ENST00000564703 DDTP30046 118 aa9.72□□□□□ -0.85
RAB40C-208ENST00000564703 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
RAB40C-208ENST00000564703 LOC105371267A0A1B0GV96 52 aa9.71□□□□□ -0.86
RAB40C-208ENST00000564703 PRYO14603 147 aa9.71□□□□□ -0.86
RAB40C-208ENST00000564703 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.86
RAB40C-208ENST00000564703 LINC00518Q8N0U6 118 aa9.71□□□□□ -0.86
RAB40C-208ENST00000564703 KCNQ1DNQ9H478 68 aa9.71□□□□□ -0.86
RAB40C-208ENST00000564703 CBY1Q9Y3M2 126 aa9.71□□□□□ -0.86
RAB40C-208ENST00000564703 OR13C6PQ8NH95 151 aa9.7□□□□□ -0.86
RAB40C-208ENST00000564703 VAMP8Q9BV40 100 aa9.7□□□□□ -0.86
RAB40C-208ENST00000564703 LINC01600Q96MT4 127 aa9.69□□□□□ -0.86
RAB40C-208ENST00000564703 PAM16Q9Y3D7 125 aa9.69□□□□□ -0.86
RAB40C-208ENST00000564703 ETDCA0A1B0GVM5 59 aa9.68□□□□□ -0.86
RAB40C-208ENST00000564703 COX8AP10176 69 aa9.68□□□□□ -0.86
RAB40C-208ENST00000564703 SPATA45Q537H7 98 aa9.68□□□□□ -0.86
RAB40C-208ENST00000564703 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
RAB40C-208ENST00000564703 PRLHP81277 87 aa9.67□□□□□ -0.86
RAB40C-208ENST00000564703 IGLV6-57P01721 117 aa9.66□□□□□ -0.86
RAB40C-208ENST00000564703 HINT1P49773 126 aaPredicted RBP9.66□□□□□ -0.86
RAB40C-208ENST00000564703 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
RAB40C-208ENST00000564703 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
RAB40C-208ENST00000564703 C14orf144Q96I85 54 aa9.65□□□□□ -0.86
RAB40C-208ENST00000564703 DLEU1O43261 78 aa9.64□□□□□ -0.87
RAB40C-208ENST00000564703 SPRR1AP35321 89 aa9.64□□□□□ -0.87
RAB40C-208ENST00000564703 KRTAP13-1Q8IUC0 172 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms