RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
NME3-207ENST00000564628 PCP2Q8IVA1 136 aa11.85□□□□□ -0.51
NME3-207ENST00000564628 Q8IZM0 81 aa11.85□□□□□ -0.51
NME3-207ENST00000564628 COX7B2Q8TF08 81 aa11.85□□□□□ -0.51
NME3-207ENST00000564628 MYMXA0A1B0GTQ4 84 aa11.84□□□□□ -0.51
NME3-207ENST00000564628 C6orf226Q5I0X4 101 aa11.84□□□□□ -0.51
NME3-207ENST00000564628 SFTA2Q6UW10 78 aa11.84□□□□□ -0.51
NME3-207ENST00000564628 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
NME3-207ENST00000564628 RNF213Q63HN8 5207 aa11.84□□□□□ -0.51
NME3-207ENST00000564628 TRBV30A0A0K0K1B3 111 aa11.83□□□□□ -0.52
NME3-207ENST00000564628 ZNF815PA8K554 130 aa11.83□□□□□ -0.52
NME3-207ENST00000564628 GAGE2BQ13066 116 aa11.83□□□□□ -0.52
NME3-207ENST00000564628 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
NME3-207ENST00000564628 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
NME3-207ENST00000564628 TNXBP22105 4242 aa11.81□□□□□ -0.52
NME3-207ENST00000564628 LRP2P98164 4655 aa11.81□□□□□ -0.52
NME3-207ENST00000564628 RPL18AQ02543 176 aaKnown RBP11.81□□□□□ -0.52
NME3-207ENST00000564628 C7orf33Q8WU49 177 aa11.81□□□□□ -0.52
NME3-207ENST00000564628 CXCL5P42830 114 aa11.8□□□□□ -0.52
NME3-207ENST00000564628 TSPEAR-AS2P59090 65 aa11.8□□□□□ -0.52
NME3-207ENST00000564628 HERV-K104P63124 156 aa11.8□□□□□ -0.52
NME3-207ENST00000564628 CKS1BP61024 79 aa11.79□□□□□ -0.52
NME3-207ENST00000564628 SCGB1D4Q6XE38 83 aa11.79□□□□□ -0.52
NME3-207ENST00000564628 Q6ZRP5 223 aa11.79□□□□□ -0.52
NME3-207ENST00000564628 TTTY13Q9BZ97 58 aa11.79□□□□□ -0.52
NME3-207ENST00000564628 LINC00587B1AMM8 73 aa11.78□□□□□ -0.52
NME3-207ENST00000564628 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
NME3-207ENST00000564628 A0A1W2PNN7 141 aa11.77□□□□□ -0.53
NME3-207ENST00000564628 DDTP30046 118 aa11.77□□□□□ -0.53
NME3-207ENST00000564628 HIGD1BQ9P298 99 aa11.77□□□□□ -0.53
NME3-207ENST00000564628 NDUFC2-KCTD14E9PQ53 114 aa11.76□□□□□ -0.53
NME3-207ENST00000564628 C9orf116Q5BN46 136 aaPredicted RBP11.76□□□□□ -0.53
NME3-207ENST00000564628 PCP4L1A6NKN8 68 aa11.75□□□□□ -0.53
NME3-207ENST00000564628 ZNF625Q96I27 306 aaPredicted RBP11.75□□□□□ -0.53
NME3-207ENST00000564628 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
NME3-207ENST00000564628 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
NME3-207ENST00000564628 GAGE2EQ4V326 116 aa11.72□□□□□ -0.53
NME3-207ENST00000564628 GAGE2DQ9UEU5 116 aa11.72□□□□□ -0.53
NME3-207ENST00000564628 TMEM238C9JI98 176 aa11.71□□□□□ -0.53
NME3-207ENST00000564628 TIMM17BO60830 172 aa11.71□□□□□ -0.53
NME3-207ENST00000564628 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
NME3-207ENST00000564628 C2orf91Q6ZV80 131 aa11.71□□□□□ -0.53
NME3-207ENST00000564628 FAM168BA1KXE4 195 aa11.7□□□□□ -0.54
NME3-207ENST00000564628 SRSF9Q13242 221 aaKnown RBP eCLIP11.7□□□□□ -0.54
NME3-207ENST00000564628 TAL2Q16559 108 aa11.7□□□□□ -0.54
NME3-207ENST00000564628 C9orf129Q5T035 196 aaKnown RBP11.7□□□□□ -0.54
NME3-207ENST00000564628 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
NME3-207ENST00000564628 Q6ZVH6 145 aa11.69□□□□□ -0.54
NME3-207ENST00000564628 SPANXB1Q9NS25 103 aaPredicted RBP11.69□□□□□ -0.54
NME3-207ENST00000564628 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
NME3-207ENST00000564628 CTAG1AP78358 180 aa11.68□□□□□ -0.54
NME3-207ENST00000564628 COX17Q14061 63 aa11.68□□□□□ -0.54
NME3-207ENST00000564628 KRTAP10-8P60410 259 aa11.67□□□□□ -0.54
NME3-207ENST00000564628 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
NME3-207ENST00000564628 HIST1H4GQ99525 98 aa11.67□□□□□ -0.54
NME3-207ENST00000564628 HSD52Q0P140 79 aa11.66□□□□□ -0.54
NME3-207ENST00000564628 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
NME3-207ENST00000564628 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
NME3-207ENST00000564628 COPS9Q8WXC6 57 aa11.66□□□□□ -0.54
NME3-207ENST00000564628 ERG28Q9UKR5 140 aa11.66□□□□□ -0.54
NME3-207ENST00000564628 LINC00158P58513 81 aa11.65□□□□□ -0.54
NME3-207ENST00000564628 FAM19A5Q7Z5A7 132 aaPredicted RBP11.65□□□□□ -0.54
NME3-207ENST00000564628 M0R143 59 aa11.64□□□□□ -0.55
NME3-207ENST00000564628 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
NME3-207ENST00000564628 IFITM1P13164 125 aa11.63□□□□□ -0.55
NME3-207ENST00000564628 SPANXDQ9BXN6 97 aa11.63□□□□□ -0.55
NME3-207ENST00000564628 XAGE1AQ9HD64 81 aa11.63□□□□□ -0.55
NME3-207ENST00000564628 SPANXCQ9NY87 97 aa11.63□□□□□ -0.55
NME3-207ENST00000564628 PFN2P35080 140 aa11.62□□□□□ -0.55
NME3-207ENST00000564628 LITAFQ99732 161 aa11.62□□□□□ -0.55
NME3-207ENST00000564628 M0QXV9 152 aa11.61□□□□□ -0.55
NME3-207ENST00000564628 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
NME3-207ENST00000564628 CEND1Q8N111 149 aa11.61□□□□□ -0.55
NME3-207ENST00000564628 PSORS1C2Q9UIG4 136 aa11.61□□□□□ -0.55
NME3-207ENST00000564628 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
NME3-207ENST00000564628 KRTAP11-1Q8IUC1 163 aa11.6□□□□□ -0.55
NME3-207ENST00000564628 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
NME3-207ENST00000564628 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
NME3-207ENST00000564628 PPDPFQ9H3Y8 114 aa11.58□□□□□ -0.56
NME3-207ENST00000564628 TMEM238LA0A1B0GVL6 79 aa11.57□□□□□ -0.56
NME3-207ENST00000564628 A6NJY4 79 aa11.57□□□□□ -0.56
NME3-207ENST00000564628 HINT1P49773 126 aaPredicted RBP11.57□□□□□ -0.56
NME3-207ENST00000564628 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
NME3-207ENST00000564628 BVES-AS1Q5T3Y7 98 aa11.56□□□□□ -0.56
NME3-207ENST00000564628 DAND5Q8N907 189 aa11.56□□□□□ -0.56
NME3-207ENST00000564628 LINC00308Q8TCZ7 52 aa11.56□□□□□ -0.56
NME3-207ENST00000564628 C22orf24Q9Y442 160 aa11.56□□□□□ -0.56
NME3-207ENST00000564628 IGLV5-37A0A075B6J1 123 aa11.54□□□□□ -0.56
NME3-207ENST00000564628 C1orf137Q5JT78 98 aa11.54□□□□□ -0.56
NME3-207ENST00000564628 LOC107984156A0A0G2JMH3 177 aa11.53□□□□□ -0.56
NME3-207ENST00000564628 A6NDN8 102 aa11.53□□□□□ -0.56
NME3-207ENST00000564628 ARL17AQ8IVW1 177 aa11.53□□□□□ -0.56
NME3-207ENST00000564628 NPC2P61916 151 aa11.52□□□□□ -0.57
NME3-207ENST00000564628 BATFQ16520 125 aa11.52□□□□□ -0.57
NME3-207ENST00000564628 SND1-IT1Q9HBX3 110 aa11.52□□□□□ -0.57
NME3-207ENST00000564628 UBE2BP63146 152 aa11.51□□□□□ -0.57
NME3-207ENST00000564628 LBHQ53QV2 105 aaPredicted RBP11.51□□□□□ -0.57
NME3-207ENST00000564628 MRPL55Q7Z7F7 128 aaKnown RBP11.51□□□□□ -0.57
NME3-207ENST00000564628 A4D1N5 150 aa11.5□□□□□ -0.57
NME3-207ENST00000564628 IGLV7-43P04211 117 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms