RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 KRTAP26-1Q6PEX3 210 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 ENHOQ6UWT2 76 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 Q8N814 137 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 UBE2WQ96B02 151 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 RMI2Q96E14 147 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 TMEM70Q9BUB7 260 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 SEC11CQ9BY50 192 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 PCLOQ9Y6V0 5065 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 TMEM262E9PQX1 116 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 I3L3M4 83 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 PSCAO43653 123 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 PPP1R17O96001 155 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 CRPP02741 224 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 MT-ND4LP03901 98 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 ANGP03950 147 aaKnown RBP2.76□□□□□ -1.97
LINC00254-201ENST00000563416 ZNF25P17030 456 aaPredicted RBP2.76□□□□□ -1.97
LINC00254-201ENST00000563416 HBBP68871 147 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 WFDC2Q14508 124 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 C10orf91Q5T1B1 145 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 MRPL54Q6P161 138 aaKnown RBP2.76□□□□□ -1.97
LINC00254-201ENST00000563416 IMMP2LQ96T52 175 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 GNB1LQ9BYB4 327 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 ST20Q9HBF5 79 aa2.76□□□□□ -1.97
LINC00254-201ENST00000563416 CARHSP1Q9Y2V2 147 aaKnown RBP2.76□□□□□ -1.97
LINC00254-201ENST00000563416 TRAV9-1A0A075B6T8 112 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 F8W036 122 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 UBE2L6O14933 153 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 PPBPP02775 128 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 JOSD1Q15040 202 aaPredicted RBP2.75□□□□□ -1.97
LINC00254-201ENST00000563416 LINC00269Q8N2A0 174 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 DEFB104AQ8WTQ1 72 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 BTF3L4Q96K17 158 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 C20orf78Q9BR46 151 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 TMEM242Q9NWH2 141 aa2.75□□□□□ -1.97
LINC00254-201ENST00000563416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.74□□□□□ -1.97
LINC00254-201ENST00000563416 TGIF2-C20orf24A0A0A6YYL0 155 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 IGKV2-29A2NJV5 120 aaPredicted RBP2.74□□□□□ -1.97
LINC00254-201ENST00000563416 C7orf77A4D0Y5 90 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 D6R8Y8 96 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 NPYP01303 97 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 FGF6P10767 208 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 S100A2P29034 98 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 CKS2P33552 79 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 FUSP35637 526 aaKnown RBP eCLIP2.74□□□□□ -1.97
LINC00254-201ENST00000563416 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 CLPSL2Q6UWE3 100 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 Q6ZSA8 131 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 OR5A1Q8NGJ0 315 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 TIMM21Q9BVV7 248 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 SMIM2Q9BVW6 85 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 LAMTOR2Q9Y2Q5 125 aa2.74□□□□□ -1.97
LINC00254-201ENST00000563416 IGLV10-54A0A075B6I4 117 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 LECT2O14960 151 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 HERVK_113P63121 156 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 RHEBQ15382 184 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 AMMECR1LQ6DCA0 310 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 TMEM136Q6ZRR5 245 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 ST20-AS1Q8NBB2 130 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 PRELID3AQ96N28 172 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 CDC42SE2Q9NRR3 84 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 UBE2D4Q9Y2X8 147 aa2.73□□□□□ -1.97
LINC00254-201ENST00000563416 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
LINC00254-201ENST00000563416 LINC00959A0A1B0GUT2 108 aa2.72□□□□□ -1.97
LINC00254-201ENST00000563416 K7EMI3 77 aa2.72□□□□□ -1.97
LINC00254-201ENST00000563416 FCER1GP30273 86 aa2.72□□□□□ -1.97
LINC00254-201ENST00000563416 ZNF664Q8N3J9 261 aa2.72□□□□□ -1.97
LINC00254-201ENST00000563416 Q8N8P6 123 aa2.72□□□□□ -1.97
LINC00254-201ENST00000563416 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
LINC00254-201ENST00000563416 TRAPPC1Q9Y5R8 145 aa2.72□□□□□ -1.97
LINC00254-201ENST00000563416 GVQW2A0A096LPI5 108 aaPredicted RBP2.71□□□□□ -1.98
LINC00254-201ENST00000563416 CCL25O15444 150 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 MT-ND6P03923 174 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 S100PP25815 95 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 CNBPP62633 177 aaKnown RBP2.71□□□□□ -1.98
LINC00254-201ENST00000563416 RPL39P62891 51 aaKnown RBP2.71□□□□□ -1.98
LINC00254-201ENST00000563416 MRPS36P82909 103 aaKnown RBP2.71□□□□□ -1.98
LINC00254-201ENST00000563416 PMAIP1Q13794 54 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 Q6ZUT4 128 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 SVBPQ8N300 66 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 C9orf163Q8N9P6 203 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 NXT2Q9NPJ8 142 aaKnown RBP2.71□□□□□ -1.98
LINC00254-201ENST00000563416 SPANXA1Q9NS26 97 aa2.71□□□□□ -1.98
LINC00254-201ENST00000563416 MYCBP2O75592 4640 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 IGKV3OR2-268A0A0C4DH90 116 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 LINC01546A6NGU7 62 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 C1orf196B1AJZ1 125 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 APOC3P02656 99 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 IGLV7-43P04211 117 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 LINC00313P59037 77 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 SS18Q15532 418 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 NDUFA5Q16718 116 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
LINC00254-201ENST00000563416 IGHV1-58A0A0C4DH39 117 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.69□□□□□ -1.98
LINC00254-201ENST00000563416 IFI27P40305 119 aaPredicted RBP2.69□□□□□ -1.98
LINC00254-201ENST00000563416 XCL1P47992 114 aa2.69□□□□□ -1.98
LINC00254-201ENST00000563416 CIRBPQ14011 172 aaKnown RBP2.69□□□□□ -1.98
LINC00254-201ENST00000563416 SDIM1Q6ZPB5 146 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms