RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NDUFC2O95298 119 aa6.42□□□□□ -1.38
UBFD1-202ENST00000563366 HIGD2BQ4VC39 106 aa6.42□□□□□ -1.38
UBFD1-202ENST00000563366 C14orf177Q52M58 125 aa6.42□□□□□ -1.38
UBFD1-202ENST00000563366 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
UBFD1-202ENST00000563366 SND1-IT1Q9HBX3 110 aa6.42□□□□□ -1.38
UBFD1-202ENST00000563366 DNAH7Q8WXX0 4024 aa6.41□□□□□ -1.38
UBFD1-202ENST00000563366 USP17L23D6RBM5 183 aa6.41□□□□□ -1.38
UBFD1-202ENST00000563366 TSPAN13O95857 204 aa6.41□□□□□ -1.38
UBFD1-202ENST00000563366 SYCNQ0VAF6 134 aa6.41□□□□□ -1.38
UBFD1-202ENST00000563366 Q1RN00 199 aa6.41□□□□□ -1.38
UBFD1-202ENST00000563366 C6orf223Q8N319 242 aa6.41□□□□□ -1.38
UBFD1-202ENST00000563366 COX6CP09669 75 aa6.4□□□□□ -1.38
UBFD1-202ENST00000563366 SOSTDC1Q6X4U4 206 aa6.4□□□□□ -1.38
UBFD1-202ENST00000563366 FBN3Q75N90 2809 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 TRBV20-1A0A075B6N2 111 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 GAGE10A6NGK3 116 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 NDUFC2-KCTD14E9PQ53 114 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 RPL13AP40429 203 aaKnown RBP6.39□□□□□ -1.39
UBFD1-202ENST00000563366 PSMB2P49721 201 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 UBE2V1Q13404 147 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 CARD19Q96LW7 228 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 KRTAP1-5Q9BYS1 174 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 C6orf48Q9UBA6 75 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 PKIGQ9Y2B9 76 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 SPCS1Q9Y6A9 102 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
UBFD1-202ENST00000563366 C3orf84H3BNL1 204 aa6.38□□□□□ -1.39
UBFD1-202ENST00000563366 K7EP34 96 aa6.38□□□□□ -1.39
UBFD1-202ENST00000563366 Q6ZRU5 148 aa6.38□□□□□ -1.39
UBFD1-202ENST00000563366 LINC00526Q96FQ7 95 aa6.38□□□□□ -1.39
UBFD1-202ENST00000563366 TLX1NBP0CAT3 122 aa6.37□□□□□ -1.39
UBFD1-202ENST00000563366 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
UBFD1-202ENST00000563366 NAA38Q9BRA0 125 aaKnown RBP6.37□□□□□ -1.39
UBFD1-202ENST00000563366 TRBV10-2A0A0K0K1G8 114 aa6.36□□□□□ -1.39
UBFD1-202ENST00000563366 H7C2G1 150 aa6.36□□□□□ -1.39
UBFD1-202ENST00000563366 SCGB1C2P0DMR2 95 aa6.36□□□□□ -1.39
UBFD1-202ENST00000563366 PCP4P48539 62 aa6.36□□□□□ -1.39
UBFD1-202ENST00000563366 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
UBFD1-202ENST00000563366 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
UBFD1-202ENST00000563366 CBY1Q9Y3M2 126 aa6.36□□□□□ -1.39
UBFD1-202ENST00000563366 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
UBFD1-202ENST00000563366 TENM2Q9NT68 2774 aa6.34□□□□□ -1.39
UBFD1-202ENST00000563366 IGKV2-28A0A075B6P5 120 aa6.34□□□□□ -1.39
UBFD1-202ENST00000563366 IGKV2D-28P01615 120 aa6.34□□□□□ -1.39
UBFD1-202ENST00000563366 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
UBFD1-202ENST00000563366 CASC10Q5T4H9 136 aa6.34□□□□□ -1.39
UBFD1-202ENST00000563366 LINC00337Q8N6G1 96 aa6.34□□□□□ -1.39
UBFD1-202ENST00000563366 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.4
UBFD1-202ENST00000563366 LOC107984640A0A0U1RRK4 108 aa6.33□□□□□ -1.4
UBFD1-202ENST00000563366 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
UBFD1-202ENST00000563366 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
UBFD1-202ENST00000563366 OR13C6PQ8NH95 151 aa6.33□□□□□ -1.4
UBFD1-202ENST00000563366 LECT2O14960 151 aa6.32□□□□□ -1.4
UBFD1-202ENST00000563366 RPL18AQ02543 176 aaKnown RBP6.32□□□□□ -1.4
UBFD1-202ENST00000563366 ATXN8Q156A1 80 aa6.32□□□□□ -1.4
UBFD1-202ENST00000563366 Q6ZR54 194 aa6.32□□□□□ -1.4
UBFD1-202ENST00000563366 STARD9Q9P2P6 4700 aa6.32□□□□□ -1.4
UBFD1-202ENST00000563366 LYSTQ99698 3801 aa6.32□□□□□ -1.4
UBFD1-202ENST00000563366 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
UBFD1-202ENST00000563366 H0YGX0 51 aa6.31□□□□□ -1.4
UBFD1-202ENST00000563366 PRYO14603 147 aa6.31□□□□□ -1.4
UBFD1-202ENST00000563366 LY6G6CO95867 125 aa6.31□□□□□ -1.4
UBFD1-202ENST00000563366 Q6ZRN7 208 aaPredicted RBP6.31□□□□□ -1.4
UBFD1-202ENST00000563366 Q6ZRP5 223 aa6.31□□□□□ -1.4
UBFD1-202ENST00000563366 XAGE1AQ9HD64 81 aa6.31□□□□□ -1.4
UBFD1-202ENST00000563366 F8W1H4 67 aa6.3□□□□□ -1.4
UBFD1-202ENST00000563366 GAGE2EQ4V326 116 aa6.3□□□□□ -1.4
UBFD1-202ENST00000563366 GAGE2DQ9UEU5 116 aa6.3□□□□□ -1.4
UBFD1-202ENST00000563366 LRCOL1A6NCL2 159 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 H3BMG7 143 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 M0R2N4 97 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 M0R378 163 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 NCR3O14931 201 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 SNCGO76070 127 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 TCL1BO95988 128 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 SLPIP03973 132 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 C1orf134Q5TEV5 83 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 SMIM11BQ8TCY0 68 aa6.29□□□□□ -1.4
UBFD1-202ENST00000563366 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
UBFD1-202ENST00000563366 LST1O00453 97 aa6.28□□□□□ -1.4
UBFD1-202ENST00000563366 IGLV6-57P01721 117 aa6.28□□□□□ -1.4
UBFD1-202ENST00000563366 VPREB1P12018 145 aa6.28□□□□□ -1.4
UBFD1-202ENST00000563366 TGP01266 2768 aa6.28□□□□□ -1.4
UBFD1-202ENST00000563366 IGLV5-37A0A075B6J1 123 aa6.27□□□□□ -1.41
UBFD1-202ENST00000563366 C16orf90A8MZG2 172 aa6.27□□□□□ -1.41
UBFD1-202ENST00000563366 WFDC2Q14508 124 aa6.27□□□□□ -1.41
UBFD1-202ENST00000563366 Q8N814 137 aa6.27□□□□□ -1.41
UBFD1-202ENST00000563366 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
UBFD1-202ENST00000563366 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.26□□□□□ -1.41
UBFD1-202ENST00000563366 A0A1B0GX51 115 aa6.26□□□□□ -1.41
UBFD1-202ENST00000563366 TRACP01848 142 aa6.26□□□□□ -1.41
UBFD1-202ENST00000563366 PRR3P79522 188 aaKnown RBP6.26□□□□□ -1.41
UBFD1-202ENST00000563366 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
UBFD1-202ENST00000563366 LINC01620Q4KN68 170 aa6.26□□□□□ -1.41
UBFD1-202ENST00000563366 C9orf129Q5T035 196 aaKnown RBP6.26□□□□□ -1.41
UBFD1-202ENST00000563366 C9orf163Q8N9P6 203 aa6.26□□□□□ -1.41
UBFD1-202ENST00000563366 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
UBFD1-202ENST00000563366 A0A087WTM6 91 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms