RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
SMG1-207ENST00000563235 WDFY3Q8IZQ1 3526 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 A0A087WSZ3 146 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 NDUFA4L2Q9NRX3 87 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 IGLV10-54A0A075B6I4 117 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 LRCOL1A6NCL2 159 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 IGLV3-19P01714 112 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 KRTAP17-1Q9BYP8 105 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 UNC13CQ8NB66 2214 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 FLNCQ14315 2725 aa3.01□□□□□ -1.93
SMG1-207ENST00000563235 FBN1P35555 2871 aaKnown RBP3.01□□□□□ -1.93
SMG1-207ENST00000563235 SPANXA2-OT1Q8N9U9 137 aa3□□□□□ -1.93
SMG1-207ENST00000563235 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
SMG1-207ENST00000563235 RPL36ALQ969Q0 106 aaKnown RBP3□□□□□ -1.93
SMG1-207ENST00000563235 IMMP1LQ96LU5 166 aa3□□□□□ -1.93
SMG1-207ENST00000563235 RNF5Q99942 180 aa3□□□□□ -1.93
SMG1-207ENST00000563235 ARHGAP32A7KAX9 2087 aa3□□□□□ -1.93
SMG1-207ENST00000563235 IGLV4-69A0A075B6H9 119 aa3□□□□□ -1.93
SMG1-207ENST00000563235 A0A1B0GUV1 79 aa3□□□□□ -1.93
SMG1-207ENST00000563235 NDUFA3O95167 84 aa3□□□□□ -1.93
SMG1-207ENST00000563235 C9orf163Q8N9P6 203 aa3□□□□□ -1.93
SMG1-207ENST00000563235 ICE1Q9Y2F5 2266 aa3□□□□□ -1.93
SMG1-207ENST00000563235 TRBV6-8A0A0A6YYG3 113 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 SPTY2D1-AS1A0A0U1RR47 76 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 A0A1W2PNM2 257 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 ERC2-IT1O76042 136 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 PDZD2O15018 2839 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 LOC101927531A0A1B0GV80 90 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 ODF3BA8MYP8 253 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 COX6CP09669 75 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 TMEM254Q8TBM7 123 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 KLK12Q9UKR0 248 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 C22orf24Q9Y442 160 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 HIVEP3Q5T1R4 2406 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 HIVEP1P15822 2718 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 LRBAP50851 2863 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 IGIPA6NJ69 53 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 OBSCN-AS1Q96MR7 158 aa2.99□□□□□ -1.93
SMG1-207ENST00000563235 SEC16AO15027 2179 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 AKAP9Q99996 3911 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 IGHV3-53P01767 116 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.98□□□□□ -1.93
SMG1-207ENST00000563235 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 SMIM2Q9BVW6 85 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 TRAV23DV6A0A075B6W5 121 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 IGKV3D-7A0A0C4DH55 119 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 M0R3E3 92 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 GAS8-AS1O95177 125 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 PDE6HQ13956 83 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 ATP5EP2Q5VTU8 51 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 PATE1Q8WXA2 126 aa2.98□□□□□ -1.93
SMG1-207ENST00000563235 INTS1Q8N201 2190 aaKnown RBP2.98□□□□□ -1.93
SMG1-207ENST00000563235 MUSTN1Q8IVN3 82 aa2.97□□□□□ -1.93
SMG1-207ENST00000563235 DEFB119Q8N690 84 aa2.97□□□□□ -1.93
SMG1-207ENST00000563235 USF3Q68DE3 2245 aa2.97□□□□□ -1.93
SMG1-207ENST00000563235 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
SMG1-207ENST00000563235 CACNA1EQ15878 2313 aa2.97□□□□□ -1.93
SMG1-207ENST00000563235 TRBV7-4A0A0J9YYF1 115 aa2.96□□□□□ -1.93
SMG1-207ENST00000563235 DEFB116Q30KQ4 102 aa2.96□□□□□ -1.93
SMG1-207ENST00000563235 DEFB110Q30KQ9 67 aa2.96□□□□□ -1.93
SMG1-207ENST00000563235 H3BRN7 92 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 UBALD1Q8TB05 177 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 KIF25-AS1Q9Y6Z4 181 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 DOCK10Q96BY6 2186 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 COL12A1Q99715 3063 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 ARFGEF3Q5TH69 2177 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 MTORP42345 2549 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 NAV3Q8IVL0 2385 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 Q5W150 140 aa2.96□□□□□ -1.94
SMG1-207ENST00000563235 SPTBN1Q01082 2364 aaKnown RBP2.95□□□□□ -1.94
SMG1-207ENST00000563235 ANKHD1Q8IWZ3 2542 aaKnown RBP2.95□□□□□ -1.94
SMG1-207ENST00000563235 MED12Q93074 2177 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 IGKV3D-15A0A087WSY6 115 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 I3L3M4 83 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 ERHP84090 104 aaKnown RBP2.95□□□□□ -1.94
SMG1-207ENST00000563235 RPL39P5Q59GN2 51 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 TMEM167AQ8TBQ9 72 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 MRPL36Q9P0J6 103 aaKnown RBP2.95□□□□□ -1.94
SMG1-207ENST00000563235 FN1P02751 2386 aaKnown RBP2.95□□□□□ -1.94
SMG1-207ENST00000563235 CR1P17927 2039 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 A0A1B0GU33 70 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 DEFB133Q30KQ1 61 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 ZNF833PQ6ZTB9 187 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 PRR34Q9NV39 138 aa2.95□□□□□ -1.94
SMG1-207ENST00000563235 IGKV1-17P01599 117 aa2.94□□□□□ -1.94
SMG1-207ENST00000563235 SAA2P0DJI9 122 aaPredicted RBP2.94□□□□□ -1.94
SMG1-207ENST00000563235 ATMQ13315 3056 aa2.94□□□□□ -1.94
SMG1-207ENST00000563235 KNTC1P50748 2209 aa2.93□□□□□ -1.94
SMG1-207ENST00000563235 PPP1R17O96001 155 aa2.93□□□□□ -1.94
SMG1-207ENST00000563235 WT1-ASQ06250 92 aa2.93□□□□□ -1.94
SMG1-207ENST00000563235 COL27A1Q8IZC6 1860 aaPredicted RBP2.93□□□□□ -1.94
SMG1-207ENST00000563235 IGHV3-64A0A075B6Q5 118 aa2.93□□□□□ -1.94
SMG1-207ENST00000563235 A0A1W2PNU3 283 aaPredicted RBP2.93□□□□□ -1.94
SMG1-207ENST00000563235 IGLV7-43P04211 117 aa2.93□□□□□ -1.94
SMG1-207ENST00000563235 MRGPRG-AS1Q2M3A8 158 aa2.93□□□□□ -1.94
SMG1-207ENST00000563235 SPENQ96T58 3664 aaKnown RBP2.93□□□□□ -1.94
SMG1-207ENST00000563235 UTP20O75691 2785 aaKnown RBP2.93□□□□□ -1.94
SMG1-207ENST00000563235 TRBV10-1A0A0K0K1A3 114 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms