RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 AGRNO00468 2067 aa7.75□□□□□ -1.17
RPAP1-204ENST00000562303 LINC00313P59037 77 aa7.75□□□□□ -1.17
RPAP1-204ENST00000562303 Q8NBF4 154 aa7.75□□□□□ -1.17
RPAP1-204ENST00000562303 H3BNG1 76 aa7.75□□□□□ -1.17
RPAP1-204ENST00000562303 MYO9AB2RTY4 2548 aa7.74□□□□□ -1.17
RPAP1-204ENST00000562303 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
RPAP1-204ENST00000562303 EML5Q05BV3 1969 aa7.73□□□□□ -1.17
RPAP1-204ENST00000562303 ATP11AUNQ6ZP68 121 aa7.73□□□□□ -1.17
RPAP1-204ENST00000562303 WWC2-AS2Q96NR7 200 aa7.72□□□□□ -1.17
RPAP1-204ENST00000562303 LINC00476Q8WZB0 136 aa7.71□□□□□ -1.17
RPAP1-204ENST00000562303 Q96NJ1 140 aa7.71□□□□□ -1.17
RPAP1-204ENST00000562303 ELOF1P60002 83 aaKnown RBP7.71□□□□□ -1.18
RPAP1-204ENST00000562303 LINC00588Q9Y4M8 146 aa7.7□□□□□ -1.18
RPAP1-204ENST00000562303 ADAMTS20P59510 1910 aa7.7□□□□□ -1.18
RPAP1-204ENST00000562303 SPAG11AQ6PDA7 123 aa7.7□□□□□ -1.18
RPAP1-204ENST00000562303 Q6ZRX8 168 aa7.7□□□□□ -1.18
RPAP1-204ENST00000562303 PTPRSQ13332 1948 aa7.69□□□□□ -1.18
RPAP1-204ENST00000562303 COL5A1P20908 1838 aaPredicted RBP7.69□□□□□ -1.18
RPAP1-204ENST00000562303 RPL37AP61513 92 aaKnown RBP7.69□□□□□ -1.18
RPAP1-204ENST00000562303 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
RPAP1-204ENST00000562303 TET2Q6N021 2002 aaPredicted RBP7.68□□□□□ -1.18
RPAP1-204ENST00000562303 LRRK2Q5S007 2527 aa7.68□□□□□ -1.18
RPAP1-204ENST00000562303 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
RPAP1-204ENST00000562303 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
RPAP1-204ENST00000562303 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
RPAP1-204ENST00000562303 BCE1O60756 84 aa7.67□□□□□ -1.18
RPAP1-204ENST00000562303 ZFYVE26Q68DK2 2539 aa7.66□□□□□ -1.18
RPAP1-204ENST00000562303 A0A1B0GW54 56 aa7.66□□□□□ -1.18
RPAP1-204ENST00000562303 ABCA12Q86UK0 2595 aa7.66□□□□□ -1.18
RPAP1-204ENST00000562303 Q8NAQ8 132 aa7.65□□□□□ -1.18
RPAP1-204ENST00000562303 LINC01546A6NGU7 62 aa7.64□□□□□ -1.19
RPAP1-204ENST00000562303 IGLV5-45A0A087WSX0 123 aa7.63□□□□□ -1.19
RPAP1-204ENST00000562303 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
RPAP1-204ENST00000562303 FAM218AQ96MZ4 157 aa7.63□□□□□ -1.19
RPAP1-204ENST00000562303 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
RPAP1-204ENST00000562303 CPAMD8Q8IZJ3 1885 aa7.63□□□□□ -1.19
RPAP1-204ENST00000562303 H3BPC8 53 aa7.63□□□□□ -1.19
RPAP1-204ENST00000562303 FN1P02751 2386 aaKnown RBP7.62□□□□□ -1.19
RPAP1-204ENST00000562303 Q6ZQT0 140 aa7.62□□□□□ -1.19
RPAP1-204ENST00000562303 TLN1Q9Y490 2541 aaKnown RBP7.6□□□□□ -1.19
RPAP1-204ENST00000562303 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
RPAP1-204ENST00000562303 CDIP1Q9H305 208 aa7.6□□□□□ -1.19
RPAP1-204ENST00000562303 LOC110117498A0A087WWA1 95 aa7.59□□□□□ -1.19
RPAP1-204ENST00000562303 FAM168BA1KXE4 195 aa7.59□□□□□ -1.19
RPAP1-204ENST00000562303 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
RPAP1-204ENST00000562303 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
RPAP1-204ENST00000562303 LOC101927531A0A1B0GV80 90 aa7.58□□□□□ -1.2
RPAP1-204ENST00000562303 TLN2Q9Y4G6 2542 aa7.56□□□□□ -1.2
RPAP1-204ENST00000562303 A8MWP4 228 aa7.55□□□□□ -1.2
RPAP1-204ENST00000562303 SERTAD4-AS1Q5TG53 156 aa7.55□□□□□ -1.2
RPAP1-204ENST00000562303 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
RPAP1-204ENST00000562303 TRBV7-4A0A0J9YYF1 115 aa7.55□□□□□ -1.2
RPAP1-204ENST00000562303 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
RPAP1-204ENST00000562303 VPREB1P12018 145 aa7.53□□□□□ -1.2
RPAP1-204ENST00000562303 TM2D3Q9BRN9 247 aa7.53□□□□□ -1.2
RPAP1-204ENST00000562303 EP400Q96L91 3159 aa7.53□□□□□ -1.2
RPAP1-204ENST00000562303 USP9XQ93008 2570 aaPredicted RBP7.53□□□□□ -1.2
RPAP1-204ENST00000562303 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
RPAP1-204ENST00000562303 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
RPAP1-204ENST00000562303 ZNF462Q96JM2 2506 aa7.53□□□□□ -1.2
RPAP1-204ENST00000562303 DSCR10P59022 87 aa7.52□□□□□ -1.2
RPAP1-204ENST00000562303 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
RPAP1-204ENST00000562303 APLNQ9ULZ1 77 aa7.52□□□□□ -1.21
RPAP1-204ENST00000562303 WDR87Q6ZQQ6 2873 aa7.52□□□□□ -1.21
RPAP1-204ENST00000562303 PRO0628Q9UI54 55 aa7.52□□□□□ -1.21
RPAP1-204ENST00000562303 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
RPAP1-204ENST00000562303 K7EIL1 84 aa7.51□□□□□ -1.21
RPAP1-204ENST00000562303 IGLV1-50A0A075B6I6 118 aa7.51□□□□□ -1.21
RPAP1-204ENST00000562303 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
RPAP1-204ENST00000562303 K7EQZ3 153 aa7.5□□□□□ -1.21
RPAP1-204ENST00000562303 IGLV6-57P01721 117 aa7.5□□□□□ -1.21
RPAP1-204ENST00000562303 KRTAP10-11P60412 298 aa7.49□□□□□ -1.21
RPAP1-204ENST00000562303 OBSCN-AS1Q96MR7 158 aa7.49□□□□□ -1.21
RPAP1-204ENST00000562303 GOLGB1Q14789 3259 aaKnown RBP7.49□□□□□ -1.21
RPAP1-204ENST00000562303 CHD8Q9HCK8 2581 aa7.49□□□□□ -1.21
RPAP1-204ENST00000562303 PTPRBP23467 1997 aa7.48□□□□□ -1.21
RPAP1-204ENST00000562303 COL4A2P08572 1712 aa7.48□□□□□ -1.21
RPAP1-204ENST00000562303 C4orf26Q17RF5 130 aa7.47□□□□□ -1.21
RPAP1-204ENST00000562303 ZNF861PO60384 105 aa7.46□□□□□ -1.21
RPAP1-204ENST00000562303 COA5Q86WW8 74 aa7.46□□□□□ -1.22
RPAP1-204ENST00000562303 KCNQ1DNQ9H478 68 aa7.46□□□□□ -1.22
RPAP1-204ENST00000562303 SETD2Q9BYW2 2564 aaPredicted RBP7.46□□□□□ -1.22
RPAP1-204ENST00000562303 IGFL1Q6UW32 110 aa7.45□□□□□ -1.22
RPAP1-204ENST00000562303 F8P00451 2351 aa7.45□□□□□ -1.22
RPAP1-204ENST00000562303 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
RPAP1-204ENST00000562303 C8orf17Q9NRJ1 99 aa7.45□□□□□ -1.22
RPAP1-204ENST00000562303 A0A087WTM6 91 aa7.45□□□□□ -1.22
RPAP1-204ENST00000562303 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
RPAP1-204ENST00000562303 PRO0461Q9UI25 63 aa7.45□□□□□ -1.22
RPAP1-204ENST00000562303 PKD1L2Q7Z442 2459 aa7.44□□□□□ -1.22
RPAP1-204ENST00000562303 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
RPAP1-204ENST00000562303 UQCR11O14957 56 aa7.43□□□□□ -1.22
RPAP1-204ENST00000562303 CSNK1G2-AS1Q8NCQ2 148 aa7.43□□□□□ -1.22
RPAP1-204ENST00000562303 RBM12B-AS1Q9P1G2 102 aa7.43□□□□□ -1.22
RPAP1-204ENST00000562303 LITAFQ99732 161 aa7.42□□□□□ -1.22
RPAP1-204ENST00000562303 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
RPAP1-204ENST00000562303 A0A1B0GVX0 72 aa7.41□□□□□ -1.22
RPAP1-204ENST00000562303 LINC00528Q8N1L1 170 aa7.41□□□□□ -1.22
RPAP1-204ENST00000562303 C15orf56Q8N910 161 aa7.41□□□□□ -1.22
RPAP1-204ENST00000562303 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms