RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 LELP1Q5T871 98 aa-0.97□□□□□ -2.56
USP8-218ENST00000561330 WFDC13Q8IUB5 93 aa-0.97□□□□□ -2.56
USP8-218ENST00000561330 VAMP8Q9BV40 100 aa-0.97□□□□□ -2.56
USP8-218ENST00000561330 DPH3P1Q9H4G8 78 aa-0.97□□□□□ -2.56
USP8-218ENST00000561330 LINC00846Q9NV44 126 aa-0.97□□□□□ -2.56
USP8-218ENST00000561330 TROQ12816 1431 aaPredicted RBP-0.98□□□□□ -2.57
USP8-218ENST00000561330 SCAPERQ9BY12 1400 aa-0.98□□□□□ -2.57
USP8-218ENST00000561330 LRRC37AA6NMS7 1700 aa-0.98□□□□□ -2.57
USP8-218ENST00000561330 KIAA1551Q9HCM1 1747 aa-0.98□□□□□ -2.57
USP8-218ENST00000561330 NAP1L6A6NFF2 107 aa-0.98□□□□□ -2.57
USP8-218ENST00000561330 MT1AP04731 61 aa-0.98□□□□□ -2.57
USP8-218ENST00000561330 DEFB107AQ8IZN7 70 aa-0.98□□□□□ -2.57
USP8-218ENST00000561330 CUL7Q14999 1698 aa-0.98□□□□□ -2.57
USP8-218ENST00000561330 SPTY2D1-AS1A0A0U1RR47 76 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 CRYM-AS1A6NIL9 109 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 H3BQF6 201 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 HSD52Q0P140 79 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 TSC22D3Q99576 134 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 HIGD1BQ9P298 99 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 EDC4Q6P2E9 1401 aaKnown RBP-0.99□□□□□ -2.57
USP8-218ENST00000561330 CCDC168Q8NDH2 2452 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 DNAH11Q96DT5 4516 aa-0.99□□□□□ -2.57
USP8-218ENST00000561330 DIP2CQ9Y2E4 1556 aa-1□□□□□ -2.57
USP8-218ENST00000561330 MON2Q7Z3U7 1717 aa-1□□□□□ -2.57
USP8-218ENST00000561330 A0A0G2JND7 137 aa-1□□□□□ -2.57
USP8-218ENST00000561330 C7orf77A4D0Y5 90 aa-1□□□□□ -2.57
USP8-218ENST00000561330 PP6455Q8WZ26 134 aa-1□□□□□ -2.57
USP8-218ENST00000561330 APOBP04114 4563 aaKnown RBP-1□□□□□ -2.57
USP8-218ENST00000561330 PLECQ15149 4684 aaKnown RBP-1.01□□□□□ -2.57
USP8-218ENST00000561330 UBR3Q6ZT12 1888 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 KALRNO60229 2985 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 PKD1L2Q7Z442 2459 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 H0Y9P7 68 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 ARMS2P0C7Q2 107 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 SVBPQ8N300 66 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 A2ML1A8K2U0 1454 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 UNC13AQ9UPW8 1703 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 MTORP42345 2549 aa-1.01□□□□□ -2.57
USP8-218ENST00000561330 TRBV7-7A0A0K0K1E9 115 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 FAM186AA6NE01 2351 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 TMEM262E9PQX1 116 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 K7EP13 123 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 NDUFA2O43678 99 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 CLIP1P30622 1438 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 ASIPP42127 132 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 TARBP1Q13395 1621 aaKnown RBP-1.02□□□□□ -2.57
USP8-218ENST00000561330 CICQ96RK0 1608 aaPredicted RBP-1.02□□□□□ -2.57
USP8-218ENST00000561330 FAM107BQ9H098 131 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 MRC2Q9UBG0 1479 aa-1.02□□□□□ -2.57
USP8-218ENST00000561330 LRRK2Q5S007 2527 aa-1.03□□□□□ -2.57
USP8-218ENST00000561330 DNHD1Q96M86 4753 aa-1.03□□□□□ -2.57
USP8-218ENST00000561330 ANK3Q12955 4377 aaKnown RBP-1.03□□□□□ -2.57
USP8-218ENST00000561330 SHPRHQ149N8 1683 aa-1.03□□□□□ -2.57
USP8-218ENST00000561330 NCOA3Q9Y6Q9 1424 aa-1.03□□□□□ -2.57
USP8-218ENST00000561330 ANKRD11Q6UB99 2663 aaPredicted RBP-1.03□□□□□ -2.57
USP8-218ENST00000561330 KRTDAPP60985 99 aa-1.03□□□□□ -2.57
USP8-218ENST00000561330 C1orf54Q8WWF1 131 aa-1.03□□□□□ -2.57
USP8-218ENST00000561330 PSENENQ9NZ42 101 aa-1.03□□□□□ -2.57
USP8-218ENST00000561330 A0A0C4DFX4 3053 aa-1.04□□□□□ -2.58
USP8-218ENST00000561330 ANKRD50Q9ULJ7 1429 aa-1.04□□□□□ -2.58
USP8-218ENST00000561330 PSMG4Q5JS54 123 aa-1.04□□□□□ -2.58
USP8-218ENST00000561330 CGREF1Q99674 301 aa-1.04□□□□□ -2.58
USP8-218ENST00000561330 CHD1O14646 1710 aa-1.04□□□□□ -2.58
USP8-218ENST00000561330 SACSQ9NZJ4 4579 aa-1.04□□□□□ -2.58
USP8-218ENST00000561330 C5P01031 1676 aa-1.04□□□□□ -2.58
USP8-218ENST00000561330 CUX1P39880 1505 aa-1.05□□□□□ -2.58
USP8-218ENST00000561330 MGAM2Q2M2H8 2515 aa-1.05□□□□□ -2.58
USP8-218ENST00000561330 NIPBLQ6KC79 2804 aaeCLIP-1.05□□□□□ -2.58
USP8-218ENST00000561330 MYOM2P54296 1465 aa-1.05□□□□□ -2.58
USP8-218ENST00000561330 DNAH1Q9P2D7 4330 aa-1.06□□□□□ -2.58
USP8-218ENST00000561330 NALCNQ8IZF0 1738 aa-1.06□□□□□ -2.58
USP8-218ENST00000561330 ABCA3Q99758 1704 aa-1.06□□□□□ -2.58
USP8-218ENST00000561330 ROCK2O75116 1388 aaKnown RBP-1.06□□□□□ -2.58
USP8-218ENST00000561330 CC2D2AQ9P2K1 1620 aa-1.06□□□□□ -2.58
USP8-218ENST00000561330 C9orf92A6NGG3 77 aa-1.06□□□□□ -2.58
USP8-218ENST00000561330 AP4S1Q9Y587 144 aa-1.06□□□□□ -2.58
USP8-218ENST00000561330 ARHGAP5Q13017 1502 aa-1.06□□□□□ -2.58
USP8-218ENST00000561330 GCN1Q92616 2671 aaKnown RBP-1.07□□□□□ -2.58
USP8-218ENST00000561330 hADV29S1A0JD25 119 aa-1.07□□□□□ -2.58
USP8-218ENST00000561330 PMCHL1Q16048 86 aa-1.07□□□□□ -2.58
USP8-218ENST00000561330 NMSQ5H8A3 153 aa-1.07□□□□□ -2.58
USP8-218ENST00000561330 C4AP0C0L4 1744 aa-1.07□□□□□ -2.58
USP8-218ENST00000561330 C4BP0C0L5 1744 aa-1.07□□□□□ -2.58
USP8-218ENST00000561330 CMYA5Q8N3K9 4069 aa-1.07□□□□□ -2.58
USP8-218ENST00000561330 NRKQ7Z2Y5 1582 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 COL12A1Q99715 3063 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 MYH4Q9Y623 1939 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 GNG4P50150 75 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 PPP3R1P63098 170 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 MT1HP80294 61 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 CACFD1Q9UGQ2 172 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 IER3IP1Q9Y5U9 82 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 TOPAZ1Q8N9V7 1692 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 NBEAQ8NFP9 2946 aa-1.08□□□□□ -2.58
USP8-218ENST00000561330 DYNC1H1Q14204 4646 aaKnown RBP-1.09□□□□□ -2.58
USP8-218ENST00000561330 PKD1L3Q7Z443 1732 aa-1.09□□□□□ -2.58
USP8-218ENST00000561330 TMEM218A2RU14 115 aa-1.09□□□□□ -2.58
USP8-218ENST00000561330 H3BQ15 152 aa-1.09□□□□□ -2.58
USP8-218ENST00000561330 S100A1P23297 94 aa-1.09□□□□□ -2.58
USP8-218ENST00000561330 ABCC5O15440 1437 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms