RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HERVK_113P61574 105 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HERV-K104P63124 156 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 NDUFA12Q9UI09 145 aa7.86□□□□□ -1.15
CTDSPL2-209ENST00000560620 BCE1O60756 84 aa7.85□□□□□ -1.15
CTDSPL2-209ENST00000560620 IGKCP01834 107 aa7.85□□□□□ -1.15
CTDSPL2-209ENST00000560620 SMIM13P0DJ93 91 aa7.85□□□□□ -1.15
CTDSPL2-209ENST00000560620 UBE2AP49459 152 aa7.85□□□□□ -1.15
CTDSPL2-209ENST00000560620 KRTAP10-8P60410 259 aa7.85□□□□□ -1.15
CTDSPL2-209ENST00000560620 PRR26Q8N8Z3 221 aa7.85□□□□□ -1.15
CTDSPL2-209ENST00000560620 LINC00587B1AMM8 73 aa7.84□□□□□ -1.15
CTDSPL2-209ENST00000560620 VPREB1P12018 145 aa7.84□□□□□ -1.15
CTDSPL2-209ENST00000560620 PLEKHB2Q96CS7 222 aa7.84□□□□□ -1.15
CTDSPL2-209ENST00000560620 LEPROTO15243 131 aa7.83□□□□□ -1.16
CTDSPL2-209ENST00000560620 LGALS3P17931 250 aaKnown RBP7.83□□□□□ -1.16
CTDSPL2-209ENST00000560620 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
CTDSPL2-209ENST00000560620 J3QQQ9 107 aa7.82□□□□□ -1.16
CTDSPL2-209ENST00000560620 MIR7-3HGQ8N6C7 128 aa7.82□□□□□ -1.16
CTDSPL2-209ENST00000560620 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
CTDSPL2-209ENST00000560620 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
CTDSPL2-209ENST00000560620 FAM19A1Q7Z5A9 133 aa7.81□□□□□ -1.16
CTDSPL2-209ENST00000560620 BOD1L2Q8IYS8 172 aa7.81□□□□□ -1.16
CTDSPL2-209ENST00000560620 TMEM238C9JI98 176 aa7.8□□□□□ -1.16
CTDSPL2-209ENST00000560620 Q8NDZ9 215 aa7.8□□□□□ -1.16
CTDSPL2-209ENST00000560620 SYS1-DBNDD2H3BUS1 97 aa7.79□□□□□ -1.16
CTDSPL2-209ENST00000560620 M0R378 163 aa7.79□□□□□ -1.16
CTDSPL2-209ENST00000560620 NCR3O14931 201 aa7.79□□□□□ -1.16
CTDSPL2-209ENST00000560620 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
CTDSPL2-209ENST00000560620 TMEM126AQ9H061 195 aa7.79□□□□□ -1.16
CTDSPL2-209ENST00000560620 RPL13AP40429 203 aaKnown RBP7.78□□□□□ -1.16
CTDSPL2-209ENST00000560620 NMUP48645 174 aa7.78□□□□□ -1.16
CTDSPL2-209ENST00000560620 PRLHP81277 87 aa7.78□□□□□ -1.16
CTDSPL2-209ENST00000560620 DAND5Q8N907 189 aa7.78□□□□□ -1.16
CTDSPL2-209ENST00000560620 MIEN1Q9BRT3 115 aa7.78□□□□□ -1.16
CTDSPL2-209ENST00000560620 TNXBP22105 4242 aa7.78□□□□□ -1.16
CTDSPL2-209ENST00000560620 KRTDAPP60985 99 aa7.76□□□□□ -1.17
CTDSPL2-209ENST00000560620 PET117Q6UWS5 81 aa7.76□□□□□ -1.17
CTDSPL2-209ENST00000560620 E9PLD3 99 aa7.75□□□□□ -1.17
CTDSPL2-209ENST00000560620 S100A12P80511 92 aa7.75□□□□□ -1.17
CTDSPL2-209ENST00000560620 C3orf79P0CE67 100 aa7.74□□□□□ -1.17
CTDSPL2-209ENST00000560620 LINC01545Q5VT33 79 aa7.74□□□□□ -1.17
CTDSPL2-209ENST00000560620 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
CTDSPL2-209ENST00000560620 IGKV2D-26A0A0A0MRZ7 120 aa7.73□□□□□ -1.17
CTDSPL2-209ENST00000560620 CRYGAP11844 174 aa7.73□□□□□ -1.17
CTDSPL2-209ENST00000560620 S100A1P23297 94 aa7.73□□□□□ -1.17
CTDSPL2-209ENST00000560620 NPC2P61916 151 aa7.73□□□□□ -1.17
CTDSPL2-209ENST00000560620 KRTAP13-1Q8IUC0 172 aa7.73□□□□□ -1.17
CTDSPL2-209ENST00000560620 ANAPC11Q9NYG5 84 aa7.73□□□□□ -1.17
CTDSPL2-209ENST00000560620 C20orf202A1L168 122 aa7.72□□□□□ -1.17
CTDSPL2-209ENST00000560620 COA6Q5JTJ3 125 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-209ENST00000560620 A0A087X002 238 aa7.71□□□□□ -1.18
CTDSPL2-209ENST00000560620 A0A0J9YXY3 114 aa7.71□□□□□ -1.18
CTDSPL2-209ENST00000560620 ETDCA0A1B0GVM5 59 aa7.71□□□□□ -1.18
CTDSPL2-209ENST00000560620 PRYO14603 147 aa7.71□□□□□ -1.18
CTDSPL2-209ENST00000560620 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
CTDSPL2-209ENST00000560620 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
CTDSPL2-209ENST00000560620 S100A7L2Q5SY68 101 aa7.7□□□□□ -1.18
CTDSPL2-209ENST00000560620 ZNF815PA8K554 130 aa7.69□□□□□ -1.18
CTDSPL2-209ENST00000560620 DDTP30046 118 aa7.69□□□□□ -1.18
CTDSPL2-209ENST00000560620 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
CTDSPL2-209ENST00000560620 LOC107984156A0A0G2JMH3 177 aa7.68□□□□□ -1.18
CTDSPL2-209ENST00000560620 TSPAN13O95857 204 aa7.68□□□□□ -1.18
CTDSPL2-209ENST00000560620 ADAMTSL4-AS1Q5T5F5 129 aa7.68□□□□□ -1.18
CTDSPL2-209ENST00000560620 ARL17AQ8IVW1 177 aa7.68□□□□□ -1.18
CTDSPL2-209ENST00000560620 KCNQ1DNQ9H478 68 aa7.68□□□□□ -1.18
CTDSPL2-209ENST00000560620 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
CTDSPL2-209ENST00000560620 TRBV10-2A0A0K0K1G8 114 aa7.67□□□□□ -1.18
CTDSPL2-209ENST00000560620 S100A2P29034 98 aa7.67□□□□□ -1.18
CTDSPL2-209ENST00000560620 ATOH7Q8N100 152 aa7.67□□□□□ -1.18
CTDSPL2-209ENST00000560620 TTTY13Q9BZ97 58 aa7.67□□□□□ -1.18
CTDSPL2-209ENST00000560620 NDUFC2O95298 119 aa7.66□□□□□ -1.18
CTDSPL2-209ENST00000560620 FAM229BQ4G0N7 80 aa7.66□□□□□ -1.18
CTDSPL2-209ENST00000560620 LINC00337Q8N6G1 96 aa7.66□□□□□ -1.18
CTDSPL2-209ENST00000560620 S100A6P06703 90 aa7.65□□□□□ -1.18
CTDSPL2-209ENST00000560620 SOSTDC1Q6X4U4 206 aa7.65□□□□□ -1.18
CTDSPL2-209ENST00000560620 SCGB1D4Q6XE38 83 aa7.65□□□□□ -1.18
CTDSPL2-209ENST00000560620 ZNF706Q9Y5V0 76 aaPredicted RBP7.65□□□□□ -1.18
CTDSPL2-209ENST00000560620 EIF4EBP3O60516 100 aaPredicted RBP7.64□□□□□ -1.19
CTDSPL2-209ENST00000560620 SPRR1AP35321 89 aa7.64□□□□□ -1.19
CTDSPL2-209ENST00000560620 AKR1D1P51857 326 aa7.64□□□□□ -1.19
CTDSPL2-209ENST00000560620 PRR4Q16378 134 aa7.64□□□□□ -1.19
CTDSPL2-209ENST00000560620 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
CTDSPL2-209ENST00000560620 LINC00308Q8TCZ7 52 aa7.64□□□□□ -1.19
CTDSPL2-209ENST00000560620 TIMM17BO60830 172 aa7.63□□□□□ -1.19
CTDSPL2-209ENST00000560620 OR13C6PQ8NH95 151 aa7.63□□□□□ -1.19
CTDSPL2-209ENST00000560620 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
CTDSPL2-209ENST00000560620 TRAV23DV6A0A075B6W5 121 aa7.62□□□□□ -1.19
CTDSPL2-209ENST00000560620 SPRR4Q96PI1 79 aa7.62□□□□□ -1.19
CTDSPL2-209ENST00000560620 LITAFQ99732 161 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms