RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 A0A0U1RRA0 63 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 EPM2AB3EWF7 344 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 NDUFC2-KCTD14E9PQ53 114 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 TIMM17BO60830 172 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 PFN2P35080 140 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 S100A12P80511 92 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 CIRBPQ14011 172 aaKnown RBP5.97□□□□□ -1.45
HERC1-206ENST00000559996 COX17Q14061 63 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 C9orf129Q5T035 196 aaKnown RBP5.97□□□□□ -1.45
HERC1-206ENST00000559996 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 ARL17AQ8IVW1 177 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 Q8NDZ9 215 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
HERC1-206ENST00000559996 LOC107984640A0A0U1RRK4 108 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 C16orf90A8MZG2 172 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 GCSHP23434 173 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 PTTG1IPP53801 180 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 SLC25A34Q6PIV7 304 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 Q6ZSA8 131 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 DAND5Q8N907 189 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 PRO1933Q9H354 126 aa5.96□□□□□ -1.46
HERC1-206ENST00000559996 CHTF8P0CG12 524 aa5.95□□□□□ -1.46
HERC1-206ENST00000559996 LINC00158P58513 81 aa5.95□□□□□ -1.46
HERC1-206ENST00000559996 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
HERC1-206ENST00000559996 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
HERC1-206ENST00000559996 LRP1BQ9NZR2 4599 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 GAGE2EQ4V326 116 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 MEIG1Q5JSS6 88 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 SPANXDQ9BXN6 97 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 XAGE1AQ9HD64 81 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 SPANXB1Q9NS25 103 aaPredicted RBP5.94□□□□□ -1.46
HERC1-206ENST00000559996 SPANXCQ9NY87 97 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 HIGD1BQ9P298 99 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 GAGE2DQ9UEU5 116 aa5.94□□□□□ -1.46
HERC1-206ENST00000559996 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
HERC1-206ENST00000559996 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
HERC1-206ENST00000559996 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
HERC1-206ENST00000559996 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
HERC1-206ENST00000559996 GAGE2BQ13066 116 aa5.93□□□□□ -1.46
HERC1-206ENST00000559996 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
HERC1-206ENST00000559996 MIEN1Q9BRT3 115 aa5.93□□□□□ -1.46
HERC1-206ENST00000559996 SCGB1D4Q6XE38 83 aa5.92□□□□□ -1.46
HERC1-206ENST00000559996 MUSTN1Q8IVN3 82 aa5.92□□□□□ -1.46
HERC1-206ENST00000559996 LINC00308Q8TCZ7 52 aa5.92□□□□□ -1.46
HERC1-206ENST00000559996 UQCR10Q9UDW1 63 aa5.92□□□□□ -1.46
HERC1-206ENST00000559996 EPPK1P58107 5090 aaKnown RBP5.91□□□□□ -1.46
HERC1-206ENST00000559996 IGKV2-24A0A0C4DH68 120 aa5.91□□□□□ -1.46
HERC1-206ENST00000559996 XGP55808 180 aa5.91□□□□□ -1.46
HERC1-206ENST00000559996 SERTAD4-AS1Q5TG53 156 aa5.91□□□□□ -1.46
HERC1-206ENST00000559996 PPDPFQ9H3Y8 114 aa5.91□□□□□ -1.46
HERC1-206ENST00000559996 PLA2G2DQ9UNK4 145 aa5.91□□□□□ -1.46
HERC1-206ENST00000559996 A0A087WYN8 130 aa5.9□□□□□ -1.46
HERC1-206ENST00000559996 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
HERC1-206ENST00000559996 VPREB1P12018 145 aa5.9□□□□□ -1.46
HERC1-206ENST00000559996 NPC2P61916 151 aa5.9□□□□□ -1.46
HERC1-206ENST00000559996 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
HERC1-206ENST00000559996 Q6ZVH6 145 aa5.9□□□□□ -1.46
HERC1-206ENST00000559996 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
HERC1-206ENST00000559996 IGLV5-37A0A075B6J1 123 aa5.89□□□□□ -1.47
HERC1-206ENST00000559996 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
HERC1-206ENST00000559996 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
HERC1-206ENST00000559996 IFITM1P13164 125 aa5.89□□□□□ -1.47
HERC1-206ENST00000559996 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
HERC1-206ENST00000559996 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
HERC1-206ENST00000559996 SRSF9Q13242 221 aaKnown RBP eCLIP5.88□□□□□ -1.47
HERC1-206ENST00000559996 TAL2Q16559 108 aa5.88□□□□□ -1.47
HERC1-206ENST00000559996 KRTAP11-1Q8IUC1 163 aa5.88□□□□□ -1.47
HERC1-206ENST00000559996 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
HERC1-206ENST00000559996 LINC00474Q9P2X8 69 aa5.88□□□□□ -1.47
HERC1-206ENST00000559996 NDUFC2O95298 119 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 CTAG1AP78358 180 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 HAMPP81172 84 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 SCXQ7RTU7 201 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 CEND1Q8N111 149 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 HIST1H4GQ99525 98 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 PKIGQ9Y2B9 76 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 C22orf24Q9Y442 160 aa5.87□□□□□ -1.47
HERC1-206ENST00000559996 A4D1N5 150 aa5.86□□□□□ -1.47
HERC1-206ENST00000559996 TSTD3H0UI37 97 aa5.86□□□□□ -1.47
HERC1-206ENST00000559996 HNRNPA3P51991 378 aaKnown RBP5.86□□□□□ -1.47
HERC1-206ENST00000559996 FXYD2P54710 66 aa5.86□□□□□ -1.47
HERC1-206ENST00000559996 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
HERC1-206ENST00000559996 DDTP30046 118 aa5.85□□□□□ -1.47
HERC1-206ENST00000559996 HSD52Q0P140 79 aa5.85□□□□□ -1.47
HERC1-206ENST00000559996 PHF5AQ7RTV0 110 aaKnown RBP5.85□□□□□ -1.47
HERC1-206ENST00000559996 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
HERC1-206ENST00000559996 LINC00337Q8N6G1 96 aa5.85□□□□□ -1.47
HERC1-206ENST00000559996 LINC00167Q96N53 147 aa5.85□□□□□ -1.47
HERC1-206ENST00000559996 CFC1BP0CG36 223 aa5.84□□□□□ -1.47
HERC1-206ENST00000559996 CFC1P0CG37 223 aa5.84□□□□□ -1.47
HERC1-206ENST00000559996 BVES-AS1Q5T3Y7 98 aa5.84□□□□□ -1.47
HERC1-206ENST00000559996 C7orf33Q8WU49 177 aa5.84□□□□□ -1.47
HERC1-206ENST00000559996 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
HERC1-206ENST00000559996 M0R378 163 aa5.83□□□□□ -1.48
HERC1-206ENST00000559996 NCR3O14931 201 aa5.83□□□□□ -1.48
HERC1-206ENST00000559996 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
HERC1-206ENST00000559996 DPH3Q96FX2 82 aa5.83□□□□□ -1.48
HERC1-206ENST00000559996 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms