RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SND1-IT1Q9HBX3 110 aa7.85□□□□□ -1.15
GABPB1-208ENST00000558970 TP73-AS1Q9UF72 201 aa7.85□□□□□ -1.15
GABPB1-208ENST00000558970 PAM16Q9Y3D7 125 aa7.85□□□□□ -1.15
GABPB1-208ENST00000558970 COX17Q14061 63 aa7.84□□□□□ -1.15
GABPB1-208ENST00000558970 SERTAD4-AS1Q5TG53 156 aa7.84□□□□□ -1.15
GABPB1-208ENST00000558970 SCGB1D4Q6XE38 83 aa7.84□□□□□ -1.15
GABPB1-208ENST00000558970 TSTD3H0UI37 97 aa7.83□□□□□ -1.16
GABPB1-208ENST00000558970 VAMP8Q9BV40 100 aa7.83□□□□□ -1.16
GABPB1-208ENST00000558970 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
GABPB1-208ENST00000558970 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
GABPB1-208ENST00000558970 PHF5AQ7RTV0 110 aaKnown RBP7.82□□□□□ -1.16
GABPB1-208ENST00000558970 KRTAP7-1Q8IUC3 87 aa7.82□□□□□ -1.16
GABPB1-208ENST00000558970 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
GABPB1-208ENST00000558970 PCP4L1A6NKN8 68 aa7.81□□□□□ -1.16
GABPB1-208ENST00000558970 M0QXV9 152 aa7.81□□□□□ -1.16
GABPB1-208ENST00000558970 ADAMTSL4-AS1Q5T5F5 129 aa7.81□□□□□ -1.16
GABPB1-208ENST00000558970 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
GABPB1-208ENST00000558970 Q8N1X5 172 aa7.8□□□□□ -1.16
GABPB1-208ENST00000558970 GAGE10A6NGK3 116 aa7.79□□□□□ -1.16
GABPB1-208ENST00000558970 BOD1L2Q8IYS8 172 aa7.79□□□□□ -1.16
GABPB1-208ENST00000558970 NKAPP1Q8N9T2 125 aa7.79□□□□□ -1.16
GABPB1-208ENST00000558970 Q8NDZ9 215 aa7.79□□□□□ -1.16
GABPB1-208ENST00000558970 C14orf144Q96I85 54 aa7.79□□□□□ -1.16
GABPB1-208ENST00000558970 MIEN1Q9BRT3 115 aa7.79□□□□□ -1.16
GABPB1-208ENST00000558970 NCR3O14931 201 aa7.78□□□□□ -1.16
GABPB1-208ENST00000558970 UBE2BP63146 152 aa7.78□□□□□ -1.16
GABPB1-208ENST00000558970 Q5VSD8 79 aa7.78□□□□□ -1.16
GABPB1-208ENST00000558970 C7orf33Q8WU49 177 aa7.78□□□□□ -1.16
GABPB1-208ENST00000558970 LITAFQ99732 161 aa7.78□□□□□ -1.16
GABPB1-208ENST00000558970 C22orf24Q9Y442 160 aa7.78□□□□□ -1.16
GABPB1-208ENST00000558970 DMBT1Q9UGM3 2413 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-208ENST00000558970 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
GABPB1-208ENST00000558970 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
GABPB1-208ENST00000558970 RPL37AP8A6NKH3 93 aa7.76□□□□□ -1.17
GABPB1-208ENST00000558970 TMEM238C9JI98 176 aa7.76□□□□□ -1.17
GABPB1-208ENST00000558970 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
GABPB1-208ENST00000558970 COX8AP10176 69 aa7.76□□□□□ -1.17
GABPB1-208ENST00000558970 VPREB1P12018 145 aa7.76□□□□□ -1.17
GABPB1-208ENST00000558970 RPL37AP61513 92 aaKnown RBP7.76□□□□□ -1.17
GABPB1-208ENST00000558970 SOSTDC1Q6X4U4 206 aa7.76□□□□□ -1.17
GABPB1-208ENST00000558970 FAT1Q14517 4588 aa7.76□□□□□ -1.17
GABPB1-208ENST00000558970 EPM2AB3EWF7 344 aa7.75□□□□□ -1.17
GABPB1-208ENST00000558970 TIMM17BO60830 172 aa7.75□□□□□ -1.17
GABPB1-208ENST00000558970 RPL24P83731 157 aaKnown RBP7.75□□□□□ -1.17
GABPB1-208ENST00000558970 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
GABPB1-208ENST00000558970 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
GABPB1-208ENST00000558970 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
GABPB1-208ENST00000558970 IGKV2-28A0A075B6P5 120 aa7.74□□□□□ -1.17
GABPB1-208ENST00000558970 IGKV2D-28P01615 120 aa7.74□□□□□ -1.17
GABPB1-208ENST00000558970 LINC00308Q8TCZ7 52 aa7.74□□□□□ -1.17
GABPB1-208ENST00000558970 LINC00167Q96N53 147 aa7.74□□□□□ -1.17
GABPB1-208ENST00000558970 PLA2G2DQ9UNK4 145 aa7.74□□□□□ -1.17
GABPB1-208ENST00000558970 IGLV5-37A0A075B6J1 123 aa7.72□□□□□ -1.17
GABPB1-208ENST00000558970 SRSF9Q13242 221 aaKnown RBP eCLIP7.72□□□□□ -1.17
GABPB1-208ENST00000558970 SLC25A34Q6PIV7 304 aa7.72□□□□□ -1.17
GABPB1-208ENST00000558970 SPANXDQ9BXN6 97 aa7.72□□□□□ -1.17
GABPB1-208ENST00000558970 SPANXCQ9NY87 97 aa7.72□□□□□ -1.17
GABPB1-208ENST00000558970 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
GABPB1-208ENST00000558970 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
GABPB1-208ENST00000558970 DDTP30046 118 aa7.71□□□□□ -1.18
GABPB1-208ENST00000558970 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
GABPB1-208ENST00000558970 MUSTN1Q8IVN3 82 aa7.71□□□□□ -1.18
GABPB1-208ENST00000558970 LOC107984156A0A0G2JMH3 177 aa7.69□□□□□ -1.18
GABPB1-208ENST00000558970 M0R378 163 aa7.69□□□□□ -1.18
GABPB1-208ENST00000558970 ARL17AQ8IVW1 177 aa7.69□□□□□ -1.18
GABPB1-208ENST00000558970 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
GABPB1-208ENST00000558970 PRO1933Q9H354 126 aa7.69□□□□□ -1.18
GABPB1-208ENST00000558970 DLEU1O43261 78 aa7.68□□□□□ -1.18
GABPB1-208ENST00000558970 CTAG1AP78358 180 aa7.68□□□□□ -1.18
GABPB1-208ENST00000558970 C2orf91Q6ZV80 131 aa7.68□□□□□ -1.18
GABPB1-208ENST00000558970 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
GABPB1-208ENST00000558970 IGLV1-50A0A075B6I6 118 aa7.67□□□□□ -1.18
GABPB1-208ENST00000558970 TRBV10-3A0A0K0K1G6 114 aa7.67□□□□□ -1.18
GABPB1-208ENST00000558970 HNRNPA3P51991 378 aaKnown RBP7.67□□□□□ -1.18
GABPB1-208ENST00000558970 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
GABPB1-208ENST00000558970 S100A7L2Q5SY68 101 aa7.67□□□□□ -1.18
GABPB1-208ENST00000558970 OR13C6PQ8NH95 151 aa7.67□□□□□ -1.18
GABPB1-208ENST00000558970 NDUFC2O95298 119 aa7.66□□□□□ -1.18
GABPB1-208ENST00000558970 IFITM1P13164 125 aa7.66□□□□□ -1.18
GABPB1-208ENST00000558970 Q6ZVH6 145 aa7.66□□□□□ -1.18
GABPB1-208ENST00000558970 SRRM2Q9UQ35 2752 aaKnown RBP7.66□□□□□ -1.18
GABPB1-208ENST00000558970 VPS13BQ7Z7G8 4022 aa7.66□□□□□ -1.18
GABPB1-208ENST00000558970 COPS9Q8WXC6 57 aa7.65□□□□□ -1.18
GABPB1-208ENST00000558970 TRBV10-2A0A0K0K1G8 114 aa7.64□□□□□ -1.19
GABPB1-208ENST00000558970 REG3GQ6UW15 175 aa7.64□□□□□ -1.19
GABPB1-208ENST00000558970 TMEM126AQ9H061 195 aa7.64□□□□□ -1.19
GABPB1-208ENST00000558970 HIGD1BQ9P298 99 aa7.64□□□□□ -1.19
GABPB1-208ENST00000558970 UQCR10Q9UDW1 63 aa7.64□□□□□ -1.19
GABPB1-208ENST00000558970 A4D1N5 150 aa7.63□□□□□ -1.19
GABPB1-208ENST00000558970 FAM19A1Q7Z5A9 133 aa7.63□□□□□ -1.19
GABPB1-208ENST00000558970 LINC00337Q8N6G1 96 aa7.63□□□□□ -1.19
GABPB1-208ENST00000558970 MYCBP2O75592 4640 aa7.63□□□□□ -1.19
GABPB1-208ENST00000558970 A6NDN8 102 aa7.62□□□□□ -1.19
GABPB1-208ENST00000558970 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
GABPB1-208ENST00000558970 INAFM2P0DMQ5 153 aa7.62□□□□□ -1.19
GABPB1-208ENST00000558970 PRLHP81277 87 aa7.62□□□□□ -1.19
GABPB1-208ENST00000558970 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
GABPB1-208ENST00000558970 M0R143 59 aa7.61□□□□□ -1.19
GABPB1-208ENST00000558970 PRYO14603 147 aa7.61□□□□□ -1.19
GABPB1-208ENST00000558970 BCE1O60756 84 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms