RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 HSBP1L1C9JCN9 74 aa8.52□□□□□ -1.05
SHMT2-234ENST00000557703 TIMM17BO60830 172 aa8.52□□□□□ -1.05
SHMT2-234ENST00000557703 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
SHMT2-234ENST00000557703 INAFM2P0DMQ5 153 aa8.52□□□□□ -1.05
SHMT2-234ENST00000557703 PRR3P79522 188 aaKnown RBP8.52□□□□□ -1.05
SHMT2-234ENST00000557703 MRPL55Q7Z7F7 128 aaKnown RBP8.52□□□□□ -1.05
SHMT2-234ENST00000557703 NKAPP1Q8N9T2 125 aa8.52□□□□□ -1.05
SHMT2-234ENST00000557703 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
SHMT2-234ENST00000557703 PHF5AQ7RTV0 110 aaKnown RBP8.51□□□□□ -1.05
SHMT2-234ENST00000557703 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
SHMT2-234ENST00000557703 IGKV2D-26A0A0A0MRZ7 120 aa8.5□□□□□ -1.05
SHMT2-234ENST00000557703 UBE2BP63146 152 aa8.5□□□□□ -1.05
SHMT2-234ENST00000557703 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
SHMT2-234ENST00000557703 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
SHMT2-234ENST00000557703 A0A0J9YXY3 114 aa8.49□□□□□ -1.05
SHMT2-234ENST00000557703 COPS9Q8WXC6 57 aa8.49□□□□□ -1.05
SHMT2-234ENST00000557703 MIEN1Q9BRT3 115 aa8.49□□□□□ -1.05
SHMT2-234ENST00000557703 ZNF815PA8K554 130 aa8.48□□□□□ -1.05
SHMT2-234ENST00000557703 VPREB1P12018 145 aa8.48□□□□□ -1.05
SHMT2-234ENST00000557703 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
SHMT2-234ENST00000557703 FLG2Q5D862 2391 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-234ENST00000557703 SCGB1D1O95968 90 aa8.47□□□□□ -1.05
SHMT2-234ENST00000557703 SPINK6Q6UWN8 80 aa8.47□□□□□ -1.05
SHMT2-234ENST00000557703 Q6ZVH6 145 aa8.47□□□□□ -1.05
SHMT2-234ENST00000557703 PPDPFQ9H3Y8 114 aa8.47□□□□□ -1.05
SHMT2-234ENST00000557703 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
SHMT2-234ENST00000557703 NDUFC2O95298 119 aa8.46□□□□□ -1.06
SHMT2-234ENST00000557703 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
SHMT2-234ENST00000557703 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
SHMT2-234ENST00000557703 TMEM238C9JI98 176 aa8.45□□□□□ -1.06
SHMT2-234ENST00000557703 M0R378 163 aa8.45□□□□□ -1.06
SHMT2-234ENST00000557703 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
SHMT2-234ENST00000557703 C1orf137Q5JT78 98 aa8.45□□□□□ -1.06
SHMT2-234ENST00000557703 BOD1L2Q8IYS8 172 aa8.45□□□□□ -1.06
SHMT2-234ENST00000557703 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
SHMT2-234ENST00000557703 S100A12P80511 92 aa8.44□□□□□ -1.06
SHMT2-234ENST00000557703 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
SHMT2-234ENST00000557703 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
SHMT2-234ENST00000557703 IGLV1-50A0A075B6I6 118 aa8.43□□□□□ -1.06
SHMT2-234ENST00000557703 OXTP01178 125 aa8.43□□□□□ -1.06
SHMT2-234ENST00000557703 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
SHMT2-234ENST00000557703 IFITM1P13164 125 aa8.43□□□□□ -1.06
SHMT2-234ENST00000557703 JOSD1Q15040 202 aaPredicted RBP8.43□□□□□ -1.06
SHMT2-234ENST00000557703 CBY1Q9Y3M2 126 aa8.43□□□□□ -1.06
SHMT2-234ENST00000557703 LITAFQ99732 161 aa8.42□□□□□ -1.06
SHMT2-234ENST00000557703 SPANXB1Q9NS25 103 aaPredicted RBP8.42□□□□□ -1.06
SHMT2-234ENST00000557703 BCE1O60756 84 aa8.41□□□□□ -1.06
SHMT2-234ENST00000557703 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
SHMT2-234ENST00000557703 SPANXDQ9BXN6 97 aa8.41□□□□□ -1.06
SHMT2-234ENST00000557703 SPANXCQ9NY87 97 aa8.41□□□□□ -1.06
SHMT2-234ENST00000557703 KRTAP29-1A8MX34 341 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-234ENST00000557703 REG3GQ6UW15 175 aa8.4□□□□□ -1.06
SHMT2-234ENST00000557703 LINC00518Q8N0U6 118 aa8.4□□□□□ -1.06
SHMT2-234ENST00000557703 DAND5Q8N907 189 aa8.4□□□□□ -1.06
SHMT2-234ENST00000557703 DIRC1Q969H9 104 aa8.4□□□□□ -1.06
SHMT2-234ENST00000557703 DLEU1O43261 78 aa8.39□□□□□ -1.07
SHMT2-234ENST00000557703 ZNF861PO60384 105 aa8.39□□□□□ -1.07
SHMT2-234ENST00000557703 RPL28P46779 137 aaKnown RBP8.39□□□□□ -1.07
SHMT2-234ENST00000557703 KRTAP11-1Q8IUC1 163 aa8.39□□□□□ -1.07
SHMT2-234ENST00000557703 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
SHMT2-234ENST00000557703 LINC00308Q8TCZ7 52 aa8.39□□□□□ -1.07
SHMT2-234ENST00000557703 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
SHMT2-234ENST00000557703 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
SHMT2-234ENST00000557703 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
SHMT2-234ENST00000557703 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
SHMT2-234ENST00000557703 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-234ENST00000557703 H0Y9J4 135 aa8.37□□□□□ -1.07
SHMT2-234ENST00000557703 PRYO14603 147 aa8.37□□□□□ -1.07
SHMT2-234ENST00000557703 HNRNPA3P51991 378 aaKnown RBP8.37□□□□□ -1.07
SHMT2-234ENST00000557703 Q8NDZ9 215 aa8.37□□□□□ -1.07
SHMT2-234ENST00000557703 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
SHMT2-234ENST00000557703 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
SHMT2-234ENST00000557703 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
SHMT2-234ENST00000557703 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
SHMT2-234ENST00000557703 COX8AP10176 69 aa8.36□□□□□ -1.07
SHMT2-234ENST00000557703 VAMP8Q9BV40 100 aa8.36□□□□□ -1.07
SHMT2-234ENST00000557703 TMEM126AQ9H061 195 aa8.36□□□□□ -1.07
SHMT2-234ENST00000557703 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
SHMT2-234ENST00000557703 IGLV6-57P01721 117 aa8.34□□□□□ -1.07
SHMT2-234ENST00000557703 DDTP30046 118 aa8.34□□□□□ -1.07
SHMT2-234ENST00000557703 S100A7L2Q5SY68 101 aa8.34□□□□□ -1.07
SHMT2-234ENST00000557703 LINC00337Q8N6G1 96 aa8.34□□□□□ -1.07
SHMT2-234ENST00000557703 NCR3O14931 201 aa8.33□□□□□ -1.08
SHMT2-234ENST00000557703 SPRR1AP35321 89 aa8.33□□□□□ -1.08
SHMT2-234ENST00000557703 UBE2AP49459 152 aa8.33□□□□□ -1.08
SHMT2-234ENST00000557703 MYCBP2O75592 4640 aa8.33□□□□□ -1.08
SHMT2-234ENST00000557703 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
SHMT2-234ENST00000557703 SPATA45Q537H7 98 aa8.32□□□□□ -1.08
SHMT2-234ENST00000557703 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
SHMT2-234ENST00000557703 LINC01600Q96MT4 127 aa8.32□□□□□ -1.08
SHMT2-234ENST00000557703 NPC2P61916 151 aa8.31□□□□□ -1.08
SHMT2-234ENST00000557703 PYY3Q5JQD4 70 aa8.31□□□□□ -1.08
SHMT2-234ENST00000557703 SLC25A34Q6PIV7 304 aa8.31□□□□□ -1.08
SHMT2-234ENST00000557703 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
SHMT2-234ENST00000557703 PAM16Q9Y3D7 125 aa8.31□□□□□ -1.08
SHMT2-234ENST00000557703 J3QL48 77 aa8.3□□□□□ -1.08
SHMT2-234ENST00000557703 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-234ENST00000557703 HINT1P49773 126 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-234ENST00000557703 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
SHMT2-234ENST00000557703 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms