RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 E9PLD3 99 aa10.31□□□□□ -0.76
NEK9-211ENST00000557673 J3QQQ9 107 aa10.31□□□□□ -0.76
NEK9-211ENST00000557673 NDUFA12Q9UI09 145 aa10.31□□□□□ -0.76
NEK9-211ENST00000557673 FAM168BA1KXE4 195 aa10.3□□□□□ -0.76
NEK9-211ENST00000557673 PFN2P35080 140 aa10.29□□□□□ -0.76
NEK9-211ENST00000557673 COX17Q14061 63 aa10.29□□□□□ -0.76
NEK9-211ENST00000557673 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
NEK9-211ENST00000557673 MYMXA0A1B0GTQ4 84 aa10.28□□□□□ -0.76
NEK9-211ENST00000557673 KRTAP10-8P60410 259 aa10.28□□□□□ -0.76
NEK9-211ENST00000557673 HERV-K104P63124 156 aa10.28□□□□□ -0.76
NEK9-211ENST00000557673 FAM19A5Q7Z5A7 132 aaPredicted RBP10.28□□□□□ -0.76
NEK9-211ENST00000557673 LGALS3P17931 250 aaKnown RBP10.27□□□□□ -0.77
NEK9-211ENST00000557673 NMUP48645 174 aa10.27□□□□□ -0.77
NEK9-211ENST00000557673 AKR1D1P51857 326 aa10.27□□□□□ -0.77
NEK9-211ENST00000557673 KRTAP7-1Q8IUC3 87 aa10.27□□□□□ -0.77
NEK9-211ENST00000557673 ATOH7Q8N100 152 aa10.27□□□□□ -0.77
NEK9-211ENST00000557673 TMA7Q9Y2S6 64 aaKnown RBP10.25□□□□□ -0.77
NEK9-211ENST00000557673 IGKV2D-26A0A0A0MRZ7 120 aa10.24□□□□□ -0.77
NEK9-211ENST00000557673 M0QXV9 152 aa10.24□□□□□ -0.77
NEK9-211ENST00000557673 MEIG1Q5JSS6 88 aa10.24□□□□□ -0.77
NEK9-211ENST00000557673 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
NEK9-211ENST00000557673 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
NEK9-211ENST00000557673 SRSF9Q13242 221 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEK9-211ENST00000557673 ANKRD39Q53RE8 183 aa10.23□□□□□ -0.77
NEK9-211ENST00000557673 PHF5AQ7RTV0 110 aaKnown RBP10.23□□□□□ -0.77
NEK9-211ENST00000557673 A0A0U1RRA0 63 aa10.22□□□□□ -0.77
NEK9-211ENST00000557673 LINC00158P58513 81 aa10.22□□□□□ -0.77
NEK9-211ENST00000557673 LINC00587B1AMM8 73 aa10.2□□□□□ -0.78
NEK9-211ENST00000557673 TTTY13Q9BZ97 58 aa10.2□□□□□ -0.78
NEK9-211ENST00000557673 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
NEK9-211ENST00000557673 A0A0J9YXY3 114 aa10.19□□□□□ -0.78
NEK9-211ENST00000557673 MIR7-3HGQ8N6C7 128 aa10.19□□□□□ -0.78
NEK9-211ENST00000557673 TP73-AS1Q9UF72 201 aa10.19□□□□□ -0.78
NEK9-211ENST00000557673 ZNF815PA8K554 130 aa10.18□□□□□ -0.78
NEK9-211ENST00000557673 C22orf24Q9Y442 160 aa10.18□□□□□ -0.78
NEK9-211ENST00000557673 SCGB1D1O95968 90 aa10.17□□□□□ -0.78
NEK9-211ENST00000557673 VPREB1P12018 145 aa10.17□□□□□ -0.78
NEK9-211ENST00000557673 Q8NDZ9 215 aa10.17□□□□□ -0.78
NEK9-211ENST00000557673 PSORS1C2Q9UIG4 136 aa10.17□□□□□ -0.78
NEK9-211ENST00000557673 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
NEK9-211ENST00000557673 KRTAP11-1Q8IUC1 163 aa10.16□□□□□ -0.78
NEK9-211ENST00000557673 DAND5Q8N907 189 aa10.16□□□□□ -0.78
NEK9-211ENST00000557673 NKAPP1Q8N9T2 125 aa10.15□□□□□ -0.78
NEK9-211ENST00000557673 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
NEK9-211ENST00000557673 UBE2BP63146 152 aa10.14□□□□□ -0.79
NEK9-211ENST00000557673 LITAFQ99732 161 aa10.14□□□□□ -0.79
NEK9-211ENST00000557673 TIMM17BO60830 172 aa10.13□□□□□ -0.79
NEK9-211ENST00000557673 RPL24P83731 157 aaKnown RBP10.13□□□□□ -0.79
NEK9-211ENST00000557673 LBHQ53QV2 105 aaPredicted RBP10.13□□□□□ -0.79
NEK9-211ENST00000557673 C1orf137Q5JT78 98 aa10.13□□□□□ -0.79
NEK9-211ENST00000557673 PCP2Q8IVA1 136 aa10.13□□□□□ -0.79
NEK9-211ENST00000557673 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
NEK9-211ENST00000557673 ADAMTSL4-AS1Q5T5F5 129 aa10.12□□□□□ -0.79
NEK9-211ENST00000557673 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
NEK9-211ENST00000557673 BOD1L2Q8IYS8 172 aa10.12□□□□□ -0.79
NEK9-211ENST00000557673 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
NEK9-211ENST00000557673 LINC00167Q96N53 147 aa10.11□□□□□ -0.79
NEK9-211ENST00000557673 GAGE10A6NGK3 116 aa10.1□□□□□ -0.79
NEK9-211ENST00000557673 SOSTDC1Q6X4U4 206 aa10.09□□□□□ -0.79
NEK9-211ENST00000557673 SCGB1D4Q6XE38 83 aa10.09□□□□□ -0.79
NEK9-211ENST00000557673 MIEN1Q9BRT3 115 aa10.09□□□□□ -0.79
NEK9-211ENST00000557673 RPL37AP8A6NKH3 93 aa10.07□□□□□ -0.8
NEK9-211ENST00000557673 TMEM238C9JI98 176 aa10.07□□□□□ -0.8
NEK9-211ENST00000557673 NCR3O14931 201 aa10.07□□□□□ -0.8
NEK9-211ENST00000557673 EIF4EBP3O60516 100 aaPredicted RBP10.07□□□□□ -0.8
NEK9-211ENST00000557673 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
NEK9-211ENST00000557673 NPC2P61916 151 aa10.07□□□□□ -0.8
NEK9-211ENST00000557673 DIRC1Q969H9 104 aa10.07□□□□□ -0.8
NEK9-211ENST00000557673 IGKV2-28A0A075B6P5 120 aa10.06□□□□□ -0.8
NEK9-211ENST00000557673 IGKV2D-28P01615 120 aa10.06□□□□□ -0.8
NEK9-211ENST00000557673 PYY3Q5JQD4 70 aa10.06□□□□□ -0.8
NEK9-211ENST00000557673 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
NEK9-211ENST00000557673 SPANXCQ9NY87 97 aa10.06□□□□□ -0.8
NEK9-211ENST00000557673 M0R378 163 aa10.05□□□□□ -0.8
NEK9-211ENST00000557673 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
NEK9-211ENST00000557673 VAMP8Q9BV40 100 aa10.05□□□□□ -0.8
NEK9-211ENST00000557673 IGLV1-50A0A075B6I6 118 aa10.04□□□□□ -0.8
NEK9-211ENST00000557673 NDUFC2O95298 119 aa10.04□□□□□ -0.8
NEK9-211ENST00000557673 SPANXB1Q9NS25 103 aaPredicted RBP10.04□□□□□ -0.8
NEK9-211ENST00000557673 PAM16Q9Y3D7 125 aa10.04□□□□□ -0.8
NEK9-211ENST00000557673 COX8AP10176 69 aa10.03□□□□□ -0.8
NEK9-211ENST00000557673 SPATA45Q537H7 98 aa10.03□□□□□ -0.8
NEK9-211ENST00000557673 TRBV10-2A0A0K0K1G8 114 aa10.02□□□□□ -0.81
NEK9-211ENST00000557673 PRR26Q8N8Z3 221 aa10.02□□□□□ -0.81
NEK9-211ENST00000557673 LPAP08519 4548 aa10.01□□□□□ -0.81
NEK9-211ENST00000557673 BCE1O60756 84 aa10.01□□□□□ -0.81
NEK9-211ENST00000557673 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
NEK9-211ENST00000557673 Q6ZVH6 145 aa10□□□□□ -0.81
NEK9-211ENST00000557673 TMEM126AQ9H061 195 aa10□□□□□ -0.81
NEK9-211ENST00000557673 TRBV10-3A0A0K0K1G6 114 aa9.99□□□□□ -0.81
NEK9-211ENST00000557673 H0Y9J4 135 aa9.99□□□□□ -0.81
NEK9-211ENST00000557673 DLEU1O43261 78 aa9.99□□□□□ -0.81
NEK9-211ENST00000557673 IFITM1P13164 125 aa9.99□□□□□ -0.81
NEK9-211ENST00000557673 PRYO14603 147 aa9.98□□□□□ -0.81
NEK9-211ENST00000557673 COPS9Q8WXC6 57 aa9.98□□□□□ -0.81
NEK9-211ENST00000557673 DDTP30046 118 aa9.97□□□□□ -0.81
NEK9-211ENST00000557673 KRTAP13-1Q8IUC0 172 aa9.97□□□□□ -0.81
NEK9-211ENST00000557673 C14orf144Q96I85 54 aa9.97□□□□□ -0.81
NEK9-211ENST00000557673 IGLV6-57P01721 117 aa9.96□□□□□ -0.82
NEK9-211ENST00000557673 KCNQ1DNQ9H478 68 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms