RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 XCL1P47992 114 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 REG3AQ06141 175 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 C5orf38Q86SI9 138 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 CHCHD10Q8WYQ3 142 aaPredicted RBP3.02□□□□□ -1.93
SRP54-212ENST00000556992 TM2D3Q9BRN9 247 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 KLK5Q9Y337 293 aaPredicted RBP3.02□□□□□ -1.93
SRP54-212ENST00000556992 AGRNO00468 2067 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 F8W1H4 67 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 COX6CP09669 75 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 PSMB2P49721 201 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 CKS1BP61024 79 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 MEIG1Q5JSS6 88 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 Q8IZM0 81 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 C15orf53Q8NAA6 179 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 MRAPQ8TCY5 172 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 LINC00308Q8TCZ7 52 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 PRR34Q9NV39 138 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 TOMM7Q9P0U1 55 aa3.01□□□□□ -1.93
SRP54-212ENST00000556992 LOC107984156A0A0G2JMH3 177 aa3□□□□□ -1.93
SRP54-212ENST00000556992 TSPAN13O95857 204 aa3□□□□□ -1.93
SRP54-212ENST00000556992 IGHV3-33P01772 117 aa3□□□□□ -1.93
SRP54-212ENST00000556992 CRPP02741 224 aa3□□□□□ -1.93
SRP54-212ENST00000556992 PRB2P02812 416 aaPredicted RBP3□□□□□ -1.93
SRP54-212ENST00000556992 CXCL5P42830 114 aa3□□□□□ -1.93
SRP54-212ENST00000556992 LINC00158P58513 81 aa3□□□□□ -1.93
SRP54-212ENST00000556992 COX17Q14061 63 aa3□□□□□ -1.93
SRP54-212ENST00000556992 ESRGQ1W209 222 aa3□□□□□ -1.93
SRP54-212ENST00000556992 CFAP161Q6P656 301 aa3□□□□□ -1.93
SRP54-212ENST00000556992 ARL17AQ8IVW1 177 aa3□□□□□ -1.93
SRP54-212ENST00000556992 NAA38Q9BRA0 125 aaKnown RBP3□□□□□ -1.93
SRP54-212ENST00000556992 KLK12Q9UKR0 248 aa3□□□□□ -1.93
SRP54-212ENST00000556992 IGLV5-37A0A075B6J1 123 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 TRAV13-2A0A0B4J235 113 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 TRBV30A0A0K0K1B3 111 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 A0A0U1RRA0 63 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 F8WDY8 70 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 CCL18P55774 89 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 Q1RN00 199 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 LINC01556Q5JQF7 62 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 ENHOQ6UWT2 76 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 KRTAP7-1Q8IUC3 87 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 MUC7Q8TAX7 377 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 UBE2WQ96B02 151 aa2.99□□□□□ -1.93
SRP54-212ENST00000556992 DNAH7Q8WXX0 4024 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 IGLV10-54A0A075B6I4 117 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 H3BMG7 143 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 H7C2G1 150 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 PFN2P35080 140 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 KIAA0087Q14695 138 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 CLPSL2Q6UWE3 100 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 MIR7-3HGQ8N6C7 128 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 DAND5Q8N907 189 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 LYSTQ99698 3801 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 B9D2Q9BPU9 175 aa2.98□□□□□ -1.93
SRP54-212ENST00000556992 K7ERU9 68 aa2.97□□□□□ -1.93
SRP54-212ENST00000556992 DNAH10OSP0CZ25 163 aa2.97□□□□□ -1.93
SRP54-212ENST00000556992 NPC2P61916 151 aa2.97□□□□□ -1.93
SRP54-212ENST00000556992 ATXN8Q156A1 80 aa2.97□□□□□ -1.93
SRP54-212ENST00000556992 WFDC10BQ8IUB3 73 aa2.97□□□□□ -1.93
SRP54-212ENST00000556992 RMI2Q96E14 147 aa2.97□□□□□ -1.93
SRP54-212ENST00000556992 SND1-IT1Q9HBX3 110 aa2.97□□□□□ -1.93
SRP54-212ENST00000556992 COL7A1Q02388 2944 aa2.96□□□□□ -1.93
SRP54-212ENST00000556992 GVQW2A0A096LPI5 108 aaPredicted RBP2.96□□□□□ -1.94
SRP54-212ENST00000556992 H0YGX0 51 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 J3QR89 54 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 M0QXV9 152 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 NDUFC2O95298 119 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 TCL1BO95988 128 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 RPL13AP40429 203 aaKnown RBP2.96□□□□□ -1.94
SRP54-212ENST00000556992 SPAG11BQ08648 103 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 WFDC2Q14508 124 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 OCIAD2Q56VL3 154 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 SOSTDC1Q6X4U4 206 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 LINC00588Q9Y4M8 146 aa2.96□□□□□ -1.94
SRP54-212ENST00000556992 RPL28P46779 137 aaKnown RBP2.95□□□□□ -1.94
SRP54-212ENST00000556992 KRTAP26-1Q6PEX3 210 aa2.95□□□□□ -1.94
SRP54-212ENST00000556992 LINC01600Q96MT4 127 aa2.95□□□□□ -1.94
SRP54-212ENST00000556992 UPK3BQ9BT76 320 aa2.95□□□□□ -1.94
SRP54-212ENST00000556992 PRO0461Q9UI25 63 aa2.95□□□□□ -1.94
SRP54-212ENST00000556992 IGKV2-28A0A075B6P5 120 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 IGKV2D-24A0A075B6R9 120 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 C9JAW5 83 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 SNCGO76070 127 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 IGKV2D-28P01615 120 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 LINC01620Q4KN68 170 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 C6orf223Q8N319 242 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 OR13C6PQ8NH95 151 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 CAMK2N2Q96S95 79 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 TMEM126AQ9H061 195 aa2.94□□□□□ -1.94
SRP54-212ENST00000556992 ABCA13Q86UQ4 5058 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 TRBV10-2A0A0K0K1G8 114 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 LST1O00453 97 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 SLC25A20O43772 301 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 TRACP01848 142 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 LINC01547P58512 204 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms