RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 NMUP48645 174 aa13.98□□□□□ -0.17
PABPN1-206ENST00000556809 LINC00158P58513 81 aa13.98□□□□□ -0.17
PABPN1-206ENST00000556809 MEIG1Q5JSS6 88 aa13.98□□□□□ -0.17
PABPN1-206ENST00000556809 J3QL48 77 aa13.97□□□□□ -0.17
PABPN1-206ENST00000556809 M0QXV9 152 aa13.97□□□□□ -0.17
PABPN1-206ENST00000556809 OXTP01178 125 aa13.97□□□□□ -0.17
PABPN1-206ENST00000556809 AKR1D1P51857 326 aa13.97□□□□□ -0.17
PABPN1-206ENST00000556809 PRR3P79522 188 aaKnown RBP13.97□□□□□ -0.17
PABPN1-206ENST00000556809 SND1-IT1Q9HBX3 110 aa13.97□□□□□ -0.17
PABPN1-206ENST00000556809 A0A0U1RRA0 63 aa13.96□□□□□ -0.17
PABPN1-206ENST00000556809 SMIM13P0DJ93 91 aa13.96□□□□□ -0.17
PABPN1-206ENST00000556809 LINC00587B1AMM8 73 aa13.95□□□□□ -0.18
PABPN1-206ENST00000556809 ATOH7Q8N100 152 aa13.95□□□□□ -0.18
PABPN1-206ENST00000556809 PLA2G2DQ9UNK4 145 aa13.95□□□□□ -0.18
PABPN1-206ENST00000556809 C22orf24Q9Y442 160 aa13.93□□□□□ -0.18
PABPN1-206ENST00000556809 IGKV2D-26A0A0A0MRZ7 120 aa13.92□□□□□ -0.18
PABPN1-206ENST00000556809 MIR7-3HGQ8N6C7 128 aa13.9□□□□□ -0.18
PABPN1-206ENST00000556809 TP73-AS1Q9UF72 201 aa13.9□□□□□ -0.18
PABPN1-206ENST00000556809 IGLV5-37A0A075B6J1 123 aa13.89□□□□□ -0.19
PABPN1-206ENST00000556809 UBE2BP63146 152 aa13.89□□□□□ -0.19
PABPN1-206ENST00000556809 LBHQ53QV2 105 aaPredicted RBP13.89□□□□□ -0.19
PABPN1-206ENST00000556809 ANKRD39Q53RE8 183 aa13.88□□□□□ -0.19
PABPN1-206ENST00000556809 MRPL55Q7Z7F7 128 aaKnown RBP13.88□□□□□ -0.19
PABPN1-206ENST00000556809 KRTAP11-1Q8IUC1 163 aa13.88□□□□□ -0.19
PABPN1-206ENST00000556809 PSORS1C2Q9UIG4 136 aa13.88□□□□□ -0.19
PABPN1-206ENST00000556809 A0A0J9YXY3 114 aa13.87□□□□□ -0.19
PABPN1-206ENST00000556809 NKAPP1Q8N9T2 125 aa13.87□□□□□ -0.19
PABPN1-206ENST00000556809 ZNF815PA8K554 130 aa13.86□□□□□ -0.19
PABPN1-206ENST00000556809 VPREB1P12018 145 aa13.86□□□□□ -0.19
PABPN1-206ENST00000556809 RPL24P83731 157 aaKnown RBP13.86□□□□□ -0.19
PABPN1-206ENST00000556809 TTTY13Q9BZ97 58 aa13.86□□□□□ -0.19
PABPN1-206ENST00000556809 SRSF9Q13242 221 aaKnown RBP eCLIP13.85□□□□□ -0.19
PABPN1-206ENST00000556809 TMA7Q9Y2S6 64 aaKnown RBP13.85□□□□□ -0.19
PABPN1-206ENST00000556809 SCGB1D1O95968 90 aa13.84□□□□□ -0.19
PABPN1-206ENST00000556809 DAND5Q8N907 189 aa13.84□□□□□ -0.19
PABPN1-206ENST00000556809 Q8NDZ9 215 aa13.84□□□□□ -0.19
PABPN1-206ENST00000556809 LINC00167Q96N53 147 aa13.83□□□□□ -0.2
PABPN1-206ENST00000556809 C1orf137Q5JT78 98 aa13.82□□□□□ -0.2
PABPN1-206ENST00000556809 GAGE10A6NGK3 116 aa13.81□□□□□ -0.2
PABPN1-206ENST00000556809 HSBP1L1C9JCN9 74 aa13.81□□□□□ -0.2
PABPN1-206ENST00000556809 MT1HL1P0DM35 61 aa13.81□□□□□ -0.2
PABPN1-206ENST00000556809 SPINK6Q6UWN8 80 aa13.81□□□□□ -0.2
PABPN1-206ENST00000556809 BOD1L2Q8IYS8 172 aa13.81□□□□□ -0.2
PABPN1-206ENST00000556809 RPL37AP8A6NKH3 93 aa13.79□□□□□ -0.2
PABPN1-206ENST00000556809 TIMM17BO60830 172 aa13.79□□□□□ -0.2
PABPN1-206ENST00000556809 ADAMTSL4-AS1Q5T5F5 129 aa13.79□□□□□ -0.2
PABPN1-206ENST00000556809 LOC107984156A0A0G2JMH3 177 aa13.78□□□□□ -0.2
PABPN1-206ENST00000556809 ARL17AQ8IVW1 177 aa13.78□□□□□ -0.2
PABPN1-206ENST00000556809 LITAFQ99732 161 aa13.78□□□□□ -0.2
PABPN1-206ENST00000556809 MIEN1Q9BRT3 115 aa13.78□□□□□ -0.2
PABPN1-206ENST00000556809 PCP2Q8IVA1 136 aa13.77□□□□□ -0.21
PABPN1-206ENST00000556809 TNXBP22105 4242 aa13.75□□□□□ -0.21
PABPN1-206ENST00000556809 IGLV7-43P04211 117 aa13.75□□□□□ -0.21
PABPN1-206ENST00000556809 SCGB1D4Q6XE38 83 aa13.75□□□□□ -0.21
PABPN1-206ENST00000556809 IGKV2-28A0A075B6P5 120 aa13.74□□□□□ -0.21
PABPN1-206ENST00000556809 M0R378 163 aa13.74□□□□□ -0.21
PABPN1-206ENST00000556809 IGKV2D-28P01615 120 aa13.74□□□□□ -0.21
PABPN1-206ENST00000556809 LINC01600Q96MT4 127 aa13.74□□□□□ -0.21
PABPN1-206ENST00000556809 IGLV1-50A0A075B6I6 118 aa13.73□□□□□ -0.21
PABPN1-206ENST00000556809 NPC2P61916 151 aa13.73□□□□□ -0.21
PABPN1-206ENST00000556809 SOSTDC1Q6X4U4 206 aa13.73□□□□□ -0.21
PABPN1-206ENST00000556809 NCR3O14931 201 aa13.72□□□□□ -0.21
PABPN1-206ENST00000556809 EIF4EBP3O60516 100 aaPredicted RBP13.71□□□□□ -0.21
PABPN1-206ENST00000556809 JOSD1Q15040 202 aaPredicted RBP13.71□□□□□ -0.21
PABPN1-206ENST00000556809 TMEM238C9JI98 176 aa13.7□□□□□ -0.22
PABPN1-206ENST00000556809 LINC00308Q8TCZ7 52 aa13.7□□□□□ -0.22
PABPN1-206ENST00000556809 BCE1O60756 84 aa13.69□□□□□ -0.22
PABPN1-206ENST00000556809 NDUFC2O95298 119 aa13.69□□□□□ -0.22
PABPN1-206ENST00000556809 REG3GQ6UW15 175 aa13.68□□□□□ -0.22
PABPN1-206ENST00000556809 SPANXDQ9BXN6 97 aa13.68□□□□□ -0.22
PABPN1-206ENST00000556809 SPANXB1Q9NS25 103 aaPredicted RBP13.68□□□□□ -0.22
PABPN1-206ENST00000556809 SPANXCQ9NY87 97 aa13.68□□□□□ -0.22
PABPN1-206ENST00000556809 TRBV10-2A0A0K0K1G8 114 aa13.66□□□□□ -0.22
PABPN1-206ENST00000556809 TMEM126AQ9H061 195 aa13.65□□□□□ -0.22
PABPN1-206ENST00000556809 KRTAP10-8P60410 259 aa13.64□□□□□ -0.23
PABPN1-206ENST00000556809 DIRC1Q969H9 104 aa13.64□□□□□ -0.23
PABPN1-206ENST00000556809 TRBV10-3A0A0K0K1G6 114 aa13.63□□□□□ -0.23
PABPN1-206ENST00000556809 ZNF861PO60384 105 aa13.63□□□□□ -0.23
PABPN1-206ENST00000556809 Q6ZVH6 145 aa13.63□□□□□ -0.23
PABPN1-206ENST00000556809 VAMP8Q9BV40 100 aa13.63□□□□□ -0.23
PABPN1-206ENST00000556809 PAM16Q9Y3D7 125 aa13.63□□□□□ -0.23
PABPN1-206ENST00000556809 COX8AP10176 69 aa13.61□□□□□ -0.23
PABPN1-206ENST00000556809 RPL28P46779 137 aaKnown RBP13.61□□□□□ -0.23
PABPN1-206ENST00000556809 SPATA45Q537H7 98 aa13.61□□□□□ -0.23
PABPN1-206ENST00000556809 PYY3Q5JQD4 70 aa13.61□□□□□ -0.23
PABPN1-206ENST00000556809 COPS9Q8WXC6 57 aa13.61□□□□□ -0.23
PABPN1-206ENST00000556809 H0Y9J4 135 aa13.6□□□□□ -0.23
PABPN1-206ENST00000556809 PRYO14603 147 aa13.6□□□□□ -0.23
PABPN1-206ENST00000556809 IFITM1P13164 125 aa13.6□□□□□ -0.23
PABPN1-206ENST00000556809 DDTP30046 118 aa13.6□□□□□ -0.23
PABPN1-206ENST00000556809 UBE2AP49459 152 aa13.59□□□□□ -0.23
PABPN1-206ENST00000556809 S100A7L2Q5SY68 101 aa13.59□□□□□ -0.23
PABPN1-206ENST00000556809 PPDPFQ9H3Y8 114 aa13.59□□□□□ -0.23
PABPN1-206ENST00000556809 KCNQ1DNQ9H478 68 aa13.59□□□□□ -0.23
PABPN1-206ENST00000556809 HMCN2Q8NDA2 5059 aa13.59□□□□□ -0.23
PABPN1-206ENST00000556809 S100A12P80511 92 aa13.58□□□□□ -0.24
PABPN1-206ENST00000556809 FAM19A1Q7Z5A9 133 aa13.58□□□□□ -0.24
PABPN1-206ENST00000556809 KRTAP13-1Q8IUC0 172 aa13.58□□□□□ -0.24
PABPN1-206ENST00000556809 DLEU1O43261 78 aa13.57□□□□□ -0.24
PABPN1-206ENST00000556809 IGLV6-57P01721 117 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms