RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 COPS9Q8WXC6 57 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 RAB37Q96AX2 223 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 IGLV5-52A0A0A0MRZ9 124 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 IGHV3OR16-9A0A0B4J2B5 98 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 IGHV3-30P01768 117 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 PRSS2P07478 247 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 IGHV3-30-5P0DP03 117 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 IFITM1P13164 125 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 REG3AQ06141 175 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 MUSTN1Q8IVN3 82 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 PRR26Q8N8Z3 221 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 SPANXDQ9BXN6 97 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 SPANXCQ9NY87 97 aa4.63□□□□□ -1.67
SLIRP-204ENST00000555890 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.62□□□□□ -1.67
SLIRP-204ENST00000555890 A0A1B0GWB2 263 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 H3BUT2 72 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 K7EP13 123 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 FABP2P12104 132 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 XCL1P47992 114 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 MIAQ16674 131 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 MEIG1Q5JSS6 88 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 GTF2H5Q6ZYL4 71 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 C5orf38Q86SI9 138 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 C15orf53Q8NAA6 179 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 TOMM7Q9P0U1 55 aa4.62□□□□□ -1.67
SLIRP-204ENST00000555890 A0A1W2PPM0 123 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 IGLL5B9A064 214 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 K7ERJ3 54 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 COX7A2LO14548 114 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 APOMO95445 188 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 CRPP02741 224 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 C6orf226Q5I0X4 101 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 CLPSL2Q6UWE3 100 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
SLIRP-204ENST00000555890 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
SLIRP-204ENST00000555890 LITAFQ99732 161 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 KLK12Q9UKR0 248 aa4.61□□□□□ -1.67
SLIRP-204ENST00000555890 IGLV5-37A0A075B6J1 123 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 TRAV8-4A0A0B4J246 113 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 A0A0U1RRA0 63 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 IGHV3-33P01772 117 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 ESRGQ1W209 222 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 Q8IZM0 81 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 PRR34Q9NV39 138 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 PRO1854Q9UHT4 67 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
SLIRP-204ENST00000555890 IGLV10-54A0A075B6I4 117 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 A0A0B4J2C4 111 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 CFC1BP0CG36 223 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 CFC1P0CG37 223 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 CXCL5P42830 114 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 CKS1BP61024 79 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 LYRM7Q5U5X0 104 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 WFDC10BQ8IUB3 73 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 PPDPFQ9H3Y8 114 aa4.59□□□□□ -1.67
SLIRP-204ENST00000555890 IBA57-AS1B1ANH7 110 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 K7EP34 96 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 CCL18P55774 89 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 LINC01556Q5JQF7 62 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 ENHOQ6UWT2 76 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 LINC00308Q8TCZ7 52 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 UBE2WQ96B02 151 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 NAA38Q9BRA0 125 aaKnown RBP4.58□□□□□ -1.68
SLIRP-204ENST00000555890 ERG28Q9UKR5 140 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 KLK5Q9Y337 293 aaPredicted RBP4.58□□□□□ -1.68
SLIRP-204ENST00000555890 SPCS1Q9Y6A9 102 aa4.58□□□□□ -1.68
SLIRP-204ENST00000555890 TSPAN13O95857 204 aa4.57□□□□□ -1.68
SLIRP-204ENST00000555890 LINC00158P58513 81 aa4.57□□□□□ -1.68
SLIRP-204ENST00000555890 NPC2P61916 151 aa4.57□□□□□ -1.68
SLIRP-204ENST00000555890 DAND5Q8N907 189 aa4.57□□□□□ -1.68
SLIRP-204ENST00000555890 LOC107984156A0A0G2JMH3 177 aa4.56□□□□□ -1.68
SLIRP-204ENST00000555890 KRTAP29-1A8MX34 341 aaPredicted RBP4.56□□□□□ -1.68
SLIRP-204ENST00000555890 DNAH10OSP0CZ25 163 aa4.56□□□□□ -1.68
SLIRP-204ENST00000555890 SCGB1C2P0DMR2 95 aa4.56□□□□□ -1.68
SLIRP-204ENST00000555890 PSMB2P49721 201 aa4.56□□□□□ -1.68
SLIRP-204ENST00000555890 Q1RN00 199 aa4.56□□□□□ -1.68
SLIRP-204ENST00000555890 ARL17AQ8IVW1 177 aa4.56□□□□□ -1.68
SLIRP-204ENST00000555890 C16orf90A8MZG2 172 aa4.55□□□□□ -1.68
SLIRP-204ENST00000555890 H7C2G1 150 aa4.55□□□□□ -1.68
SLIRP-204ENST00000555890 PFN2P35080 140 aa4.55□□□□□ -1.68
SLIRP-204ENST00000555890 SPAG11BQ08648 103 aa4.55□□□□□ -1.68
SLIRP-204ENST00000555890 COX17Q14061 63 aa4.55□□□□□ -1.68
SLIRP-204ENST00000555890 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
SLIRP-204ENST00000555890 MIR7-3HGQ8N6C7 128 aa4.55□□□□□ -1.68
SLIRP-204ENST00000555890 PKHD1L1Q86WI1 4243 aa4.54□□□□□ -1.68
SLIRP-204ENST00000555890 TRBV20-1A0A075B6N2 111 aa4.54□□□□□ -1.68
SLIRP-204ENST00000555890 COX6CP09669 75 aa4.54□□□□□ -1.68
SLIRP-204ENST00000555890 C2orf82Q6UX34 121 aa4.54□□□□□ -1.68
SLIRP-204ENST00000555890 RMI2Q96E14 147 aa4.54□□□□□ -1.68
SLIRP-204ENST00000555890 LINC00588Q9Y4M8 146 aa4.54□□□□□ -1.68
SLIRP-204ENST00000555890 IGKV2D-24A0A075B6R9 120 aa4.53□□□□□ -1.68
SLIRP-204ENST00000555890 TRAV13-2A0A0B4J235 113 aa4.53□□□□□ -1.68
SLIRP-204ENST00000555890 TRBV30A0A0K0K1B3 111 aa4.53□□□□□ -1.68
SLIRP-204ENST00000555890 A0A0U1RQV1 116 aa4.53□□□□□ -1.68
SLIRP-204ENST00000555890 RPL13AP40429 203 aaKnown RBP4.53□□□□□ -1.68
SLIRP-204ENST00000555890 KRTAP10-2P60368 255 aa4.53□□□□□ -1.68
SLIRP-204ENST00000555890 SOSTDC1Q6X4U4 206 aa4.53□□□□□ -1.68
SLIRP-204ENST00000555890 UPK3BQ9BT76 320 aa4.53□□□□□ -1.68
SLIRP-204ENST00000555890 SND1-IT1Q9HBX3 110 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms