RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 JMJD7-PLA2G4BH0Y9G9 81 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 SLPIP03973 132 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 KIAA0087Q14695 138 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 S100A7L2Q5SY68 101 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 ANK3Q12955 4377 aaKnown RBP4.79□□□□□ -1.64
TDP1-213ENST00000555880 TMEM256-PLSCR3K7ERE1 68 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 HTN3P15516 51 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 Q8N814 137 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 LINC00167Q96N53 147 aa4.79□□□□□ -1.64
TDP1-213ENST00000555880 NSD1Q96L73 2696 aaPredicted RBP4.79□□□□□ -1.64
TDP1-213ENST00000555880 CYSRT1A8MQ03 144 aa4.78□□□□□ -1.64
TDP1-213ENST00000555880 PRR3P79522 188 aaKnown RBP4.78□□□□□ -1.64
TDP1-213ENST00000555880 SPAG11BQ08648 103 aa4.78□□□□□ -1.64
TDP1-213ENST00000555880 LELP1Q5T871 98 aa4.78□□□□□ -1.64
TDP1-213ENST00000555880 Q6JHZ5 121 aa4.78□□□□□ -1.64
TDP1-213ENST00000555880 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.65
TDP1-213ENST00000555880 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 ATOX1O00244 68 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 UQCRQO14949 82 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 CCKP06307 115 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 C9orf116Q5BN46 136 aaPredicted RBP4.77□□□□□ -1.65
TDP1-213ENST00000555880 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
TDP1-213ENST00000555880 Q8NAQ8 132 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 NANOS2P60321 138 aaKnown RBP4.77□□□□□ -1.65
TDP1-213ENST00000555880 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 C9orf153Q5TBE3 101 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 C3orf22Q8N5N4 141 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 LINC00846Q9NV44 126 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 CELA1Q9UNI1 258 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 ATRQ13535 2644 aa4.77□□□□□ -1.65
TDP1-213ENST00000555880 TEP1Q99973 2627 aaKnown RBP4.76□□□□□ -1.65
TDP1-213ENST00000555880 C6orf99Q4VX62 202 aa4.76□□□□□ -1.65
TDP1-213ENST00000555880 IGKV3D-7A0A0C4DH55 119 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 A0A0J9YWU9 116 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 IGHV4-30-4P0DP06 118 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 ATP5EP2Q5VTU8 51 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 UNQ6190/PRO20217Q6UXQ8 127 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 SPATA3Q8NHX4 192 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 KLK12Q9UKR0 248 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 H3BQ85 93 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
TDP1-213ENST00000555880 RPL18AQ02543 176 aaKnown RBP4.75□□□□□ -1.65
TDP1-213ENST00000555880 C6orf223Q8N319 242 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 LINC00526Q96FQ7 95 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 PRR34Q9NV39 138 aa4.75□□□□□ -1.65
TDP1-213ENST00000555880 hADV29S1A0JD25 119 aa4.74□□□□□ -1.65
TDP1-213ENST00000555880 COX7CP15954 63 aa4.74□□□□□ -1.65
TDP1-213ENST00000555880 LINC00575Q6W349 94 aa4.74□□□□□ -1.65
TDP1-213ENST00000555880 GVQW2A0A096LPI5 108 aaPredicted RBP4.73□□□□□ -1.65
TDP1-213ENST00000555880 ZNF561-AS1K7EIQ3 104 aa4.73□□□□□ -1.65
TDP1-213ENST00000555880 C10orf25Q5T742 122 aa4.73□□□□□ -1.65
TDP1-213ENST00000555880 UBL5Q9BZL1 73 aa4.73□□□□□ -1.65
TDP1-213ENST00000555880 HIVEP1P15822 2718 aa4.73□□□□□ -1.65
TDP1-213ENST00000555880 IGLV6-57P01721 117 aa4.73□□□□□ -1.65
TDP1-213ENST00000555880 RBM3P98179 157 aaKnown RBP4.73□□□□□ -1.65
TDP1-213ENST00000555880 LAMTOR3Q9UHA4 124 aa4.73□□□□□ -1.65
TDP1-213ENST00000555880 LYPD5Q6UWN5 251 aa4.72□□□□□ -1.65
TDP1-213ENST00000555880 ENHOQ6UWT2 76 aa4.72□□□□□ -1.65
TDP1-213ENST00000555880 C3orf56Q8N813 242 aa4.72□□□□□ -1.65
TDP1-213ENST00000555880 Q8NDZ9 215 aa4.72□□□□□ -1.65
TDP1-213ENST00000555880 WFDC9Q8NEX5 89 aa4.72□□□□□ -1.65
TDP1-213ENST00000555880 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
TDP1-213ENST00000555880 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 DIRC1Q969H9 104 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 LOC110117498A0A087WWA1 95 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 TRBV10-3A0A0K0K1G6 114 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 USP17L23D6RBM5 183 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 H3BNG1 76 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 CRYGAP11844 174 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 PDE6GP18545 87 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 CAMK2N2Q96S95 79 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 DSCR8Q96T75 97 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 C6orf48Q9UBA6 75 aa4.71□□□□□ -1.66
TDP1-213ENST00000555880 A0A087WVE0 104 aa4.7□□□□□ -1.66
TDP1-213ENST00000555880 XAGE1AQ9HD64 81 aa4.7□□□□□ -1.66
TDP1-213ENST00000555880 ZNF73O43830 326 aaPredicted RBP4.69□□□□□ -1.66
TDP1-213ENST00000555880 COX7BP24311 80 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 EGFEM1PQ0D2K5 195 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 KPRPQ5T749 579 aaPredicted RBP4.69□□□□□ -1.66
TDP1-213ENST00000555880 Q6ZQT0 140 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 Q6ZQY7 126 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 C2orf48Q96LS8 159 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 TRBV7-6A0A0J9YX20 115 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 KRTAP24-1Q3LI83 254 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 HIGD2BQ4VC39 106 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 WFDC10BQ8IUB3 73 aa4.69□□□□□ -1.66
TDP1-213ENST00000555880 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.68□□□□□ -1.66
TDP1-213ENST00000555880 M0R378 163 aa4.67□□□□□ -1.66
TDP1-213ENST00000555880 UPK3BQ9BT76 320 aa4.67□□□□□ -1.66
TDP1-213ENST00000555880 C1orf43Q9BWL3 253 aa4.67□□□□□ -1.66
TDP1-213ENST00000555880 F8P00451 2351 aa4.67□□□□□ -1.66
TDP1-213ENST00000555880 NDUFC2-KCTD14E9PQ53 114 aa4.66□□□□□ -1.66
TDP1-213ENST00000555880 F8WDY8 70 aa4.66□□□□□ -1.66
TDP1-213ENST00000555880 ELOF1P60002 83 aaKnown RBP4.66□□□□□ -1.66
TDP1-213ENST00000555880 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
TDP1-213ENST00000555880 VPREB1P12018 145 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms