RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 TOMM6Q96B49 74 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 IFI27L1Q96BM0 104 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 TMEM141Q96I45 108 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 TMEM243Q9BU79 118 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 RBM12B-AS1Q9P1G2 102 aa2.83□□□□□ -1.96
FOXN3-210ENST00000555658 C8orf87E5RJ46 101 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 H7C423 109 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 TCL1BO95988 128 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 CXCL5P42830 114 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 DSCR10P59022 87 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 SRSF9Q13242 221 aaKnown RBP eCLIP2.82□□□□□ -1.963e-8■■■■□ 26.7
FOXN3-210ENST00000555658 UPK3BQ9BT76 320 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 TIMM21Q9BVV7 248 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 MEGF8Q7Z7M0 2845 aa2.82□□□□□ -1.96
FOXN3-210ENST00000555658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.81□□□□□ -1.96
FOXN3-210ENST00000555658 A0A096LNJ9 63 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 A0A096LPF7 62 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 IGHV1-58A0A0C4DH39 117 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 IGKV2-29A2NJV5 120 aaPredicted RBP2.81□□□□□ -1.96
FOXN3-210ENST00000555658 IGIPA6NJ69 53 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 ATOX1O00244 68 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 CCL18P55774 89 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 HIST1H4AP62805 103 aaKnown RBP2.81□□□□□ -1.96
FOXN3-210ENST00000555658 RPL39P62891 51 aaKnown RBP2.81□□□□□ -1.96
FOXN3-210ENST00000555658 LELP1Q5T871 98 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 LYPD5Q6UWN5 251 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 NTM-AS1Q6ZSK4 140 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 BRK1Q8WUW1 75 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 DSCR8Q96T75 97 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 TIMM17AQ99595 171 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 CHCHD7Q9BUK0 85 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 MUC4Q99102 2169 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 TRRAPQ9Y4A5 3859 aa2.81□□□□□ -1.96
FOXN3-210ENST00000555658 TRAV12-1A0A0B4J245 112 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 NUPR2A6NF83 97 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 SCGB1C2P0DMR2 95 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 PLNP26678 52 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 NPC2P61916 151 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 LGALS9CQ6DKI2 356 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 CEMP1Q6PRD7 247 aaPredicted RBP2.8□□□□□ -1.96
FOXN3-210ENST00000555658 LINC00173Q6ZV60 143 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 C5orf38Q86SI9 138 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 CHAC1Q9BUX1 264 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 UBE2D4Q9Y2X8 147 aa2.8□□□□□ -1.96
FOXN3-210ENST00000555658 IGLV4-3A0A075B6K6 122 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 hADV29S1A0JD25 119 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 ACYP1P07311 99 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 ESRGQ1W209 222 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 SCGB1D4Q6XE38 83 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 FP248Q71RG6 208 aaPredicted RBP2.79□□□□□ -1.96
FOXN3-210ENST00000555658 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 CDC42SE2Q9NRR3 84 aa2.79□□□□□ -1.96
FOXN3-210ENST00000555658 TRAV8-4A0A0B4J246 113 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 F8VRH5 84 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 NDUFS5O43920 106 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 ANGP03950 147 aaKnown RBP2.78□□□□□ -1.96
FOXN3-210ENST00000555658 FXYD2P54710 66 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 SS18Q15532 418 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 SDIM1Q6ZPB5 146 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 SERP2Q8N6R1 65 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 AMELXQ99217 191 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 MRPL35Q9NZE8 188 aaKnown RBP2.78□□□□□ -1.96
FOXN3-210ENST00000555658 TP73-AS1Q9UF72 201 aa2.78□□□□□ -1.96
FOXN3-210ENST00000555658 IGLV4-60A0A075B6I1 120 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 IGKV3OR2-268A0A0C4DH90 116 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 IGHV3-30P01768 117 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 IGHV3-33P01772 117 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 IGHV3-30-3P0DP02 117 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 IGHV3-30-5P0DP03 117 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 RNASE13Q5GAN3 156 aaKnown RBP2.77□□□□□ -1.97
FOXN3-210ENST00000555658 TMEM170BQ5T4T1 132 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 WFDC10BQ8IUB3 73 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 UBE2DNLQ8IWF7 75 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 LINC00269Q8N2A0 174 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 MUC7Q8TAX7 377 aa2.77□□□□□ -1.97
FOXN3-210ENST00000555658 ANK2Q01484 3957 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 A0A0J9YXV3 536 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 LINC00959A0A1B0GUT2 108 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 KRTAP16-1A8MUX0 517 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 M0R378 163 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 CRPP02741 224 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 DNAH10OSP0CZ25 163 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 UBE2D1P51668 147 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 HERVK_113P61574 105 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 REG3AQ06141 175 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 LINC01556Q5JQF7 62 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 LINC00242Q5T6M2 205 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 PHF5AQ7RTV0 110 aaKnown RBP2.76□□□□□ -1.97
FOXN3-210ENST00000555658 LINC00643Q86TS7 51 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 C6orf223Q8N319 242 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 FAM104AQ969W3 186 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 KLK12Q9UKR0 248 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 APLNQ9ULZ1 77 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 LINC00588Q9Y4M8 146 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 TENM3Q9P273 2699 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 STAB2Q8WWQ8 2551 aa2.76□□□□□ -1.97
FOXN3-210ENST00000555658 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
FOXN3-210ENST00000555658 IGLV4-69A0A075B6H9 119 aa2.75□□□□□ -1.97
FOXN3-210ENST00000555658 TRAV8-3A0A0A6YYJ7 113 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms