RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 DEFB135Q30KP9 77 aa11.28□□□□□ -0.6
XRCC3-209ENST00000554913 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
XRCC3-209ENST00000554913 ENHOQ6UWT2 76 aa11.27□□□□□ -0.61
XRCC3-209ENST00000554913 LYRM9A8MSI8 78 aa11.26□□□□□ -0.61
XRCC3-209ENST00000554913 TRAV23DV6A0A075B6W5 121 aa11.26□□□□□ -0.61
XRCC3-209ENST00000554913 J3KT08 172 aa11.26□□□□□ -0.61
XRCC3-209ENST00000554913 LYPD5Q6UWN5 251 aa11.25□□□□□ -0.61
XRCC3-209ENST00000554913 TENM1Q9UKZ4 2725 aa11.24□□□□□ -0.61
XRCC3-209ENST00000554913 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
XRCC3-209ENST00000554913 ATP5EP2Q5VTU8 51 aa11.24□□□□□ -0.61
XRCC3-209ENST00000554913 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
XRCC3-209ENST00000554913 FLNBO75369 2602 aaKnown RBP11.23□□□□□ -0.61
XRCC3-209ENST00000554913 CYSRT1A8MQ03 144 aa11.23□□□□□ -0.61
XRCC3-209ENST00000554913 M0R2N4 97 aa11.23□□□□□ -0.61
XRCC3-209ENST00000554913 GHRHP01286 108 aa11.23□□□□□ -0.61
XRCC3-209ENST00000554913 DAD1P61803 113 aa11.23□□□□□ -0.61
XRCC3-209ENST00000554913 CELA1Q9UNI1 258 aa11.23□□□□□ -0.61
XRCC3-209ENST00000554913 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
XRCC3-209ENST00000554913 Q6ZQT0 140 aa11.22□□□□□ -0.61
XRCC3-209ENST00000554913 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.61
XRCC3-209ENST00000554913 LAMTOR3Q9UHA4 124 aa11.21□□□□□ -0.61
XRCC3-209ENST00000554913 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
XRCC3-209ENST00000554913 HTN3P15516 51 aa11.2□□□□□ -0.62
XRCC3-209ENST00000554913 TMEM258P61165 79 aa11.2□□□□□ -0.62
XRCC3-209ENST00000554913 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
XRCC3-209ENST00000554913 IGLV6-57P01721 117 aa11.19□□□□□ -0.62
XRCC3-209ENST00000554913 KLK12Q9UKR0 248 aa11.19□□□□□ -0.62
XRCC3-209ENST00000554913 A0A0J9YWU9 116 aa11.18□□□□□ -0.62
XRCC3-209ENST00000554913 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
XRCC3-209ENST00000554913 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
XRCC3-209ENST00000554913 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
XRCC3-209ENST00000554913 Q6ZQY7 126 aa11.18□□□□□ -0.62
XRCC3-209ENST00000554913 DSCR8Q96T75 97 aa11.18□□□□□ -0.62
XRCC3-209ENST00000554913 LOC110117498A0A087WWA1 95 aa11.16□□□□□ -0.62
XRCC3-209ENST00000554913 TRBV10-3A0A0K0K1G6 114 aa11.16□□□□□ -0.62
XRCC3-209ENST00000554913 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
XRCC3-209ENST00000554913 LELP1Q5T871 98 aa11.15□□□□□ -0.62
XRCC3-209ENST00000554913 Q8NAQ8 132 aa11.15□□□□□ -0.62
XRCC3-209ENST00000554913 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
XRCC3-209ENST00000554913 C6orf48Q9UBA6 75 aa11.14□□□□□ -0.63
XRCC3-209ENST00000554913 ATRQ13535 2644 aa11.14□□□□□ -0.63
XRCC3-209ENST00000554913 OXTP01178 125 aa11.13□□□□□ -0.63
XRCC3-209ENST00000554913 C9orf66Q5T8R8 295 aa11.13□□□□□ -0.63
XRCC3-209ENST00000554913 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
XRCC3-209ENST00000554913 APOC4P55056 127 aa11.13□□□□□ -0.63
XRCC3-209ENST00000554913 LINC01547P58512 204 aaPredicted RBP11.13□□□□□ -0.63
XRCC3-209ENST00000554913 HAMPP81172 84 aa11.13□□□□□ -0.63
XRCC3-209ENST00000554913 Q6ZVQ6 151 aa11.12□□□□□ -0.63
XRCC3-209ENST00000554913 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
XRCC3-209ENST00000554913 C20orf197Q8N268 126 aa11.12□□□□□ -0.63
XRCC3-209ENST00000554913 GVQW2A0A096LPI5 108 aaPredicted RBP11.1□□□□□ -0.63
XRCC3-209ENST00000554913 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
XRCC3-209ENST00000554913 DIRC1Q969H9 104 aa11.1□□□□□ -0.63
XRCC3-209ENST00000554913 MIFP14174 115 aa11.09□□□□□ -0.63
XRCC3-209ENST00000554913 F8P00451 2351 aa11.08□□□□□ -0.64
XRCC3-209ENST00000554913 ZNF73O43830 326 aaPredicted RBP11.08□□□□□ -0.64
XRCC3-209ENST00000554913 TEP1Q99973 2627 aaKnown RBP11.08□□□□□ -0.64
XRCC3-209ENST00000554913 TRAV10A0A0B4J240 114 aa11.07□□□□□ -0.64
XRCC3-209ENST00000554913 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
XRCC3-209ENST00000554913 COX7BP24311 80 aa11.06□□□□□ -0.64
XRCC3-209ENST00000554913 PDE6GP18545 87 aa11.05□□□□□ -0.64
XRCC3-209ENST00000554913 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.04□□□□□ -0.64
XRCC3-209ENST00000554913 SCXQ7RTU7 201 aa11.04□□□□□ -0.64
XRCC3-209ENST00000554913 TRAV7A0A075B6U4 112 aa11.04□□□□□ -0.64
XRCC3-209ENST00000554913 TRBV7-4A0A0J9YYF1 115 aa11.04□□□□□ -0.64
XRCC3-209ENST00000554913 ELOF1P60002 83 aaKnown RBP11.03□□□□□ -0.64
XRCC3-209ENST00000554913 NDUFC2-KCTD14E9PQ53 114 aa11.03□□□□□ -0.64
XRCC3-209ENST00000554913 H3BQ85 93 aa11.03□□□□□ -0.64
XRCC3-209ENST00000554913 VPREB1P12018 145 aa11.03□□□□□ -0.64
XRCC3-209ENST00000554913 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
XRCC3-209ENST00000554913 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.64
XRCC3-209ENST00000554913 CXCL6P80162 114 aa11.02□□□□□ -0.65
XRCC3-209ENST00000554913 BCE1O60756 84 aa11□□□□□ -0.65
XRCC3-209ENST00000554913 Q6ZRU5 148 aa11□□□□□ -0.65
XRCC3-209ENST00000554913 H7BZZ5 65 aa10.99□□□□□ -0.65
XRCC3-209ENST00000554913 C5orf47Q569G3 176 aa10.99□□□□□ -0.65
XRCC3-209ENST00000554913 KRTAP26-1Q6PEX3 210 aa10.98□□□□□ -0.65
XRCC3-209ENST00000554913 SNURFQ9Y675 71 aa10.98□□□□□ -0.65
XRCC3-209ENST00000554913 FAM236DA0A1B0GTK5 79 aa10.97□□□□□ -0.65
XRCC3-209ENST00000554913 FAM236CP0DP71 79 aa10.97□□□□□ -0.65
XRCC3-209ENST00000554913 C4orf26Q17RF5 130 aa10.97□□□□□ -0.65
XRCC3-209ENST00000554913 TRBV7-6A0A0J9YX20 115 aa10.97□□□□□ -0.65
XRCC3-209ENST00000554913 M0R378 163 aa10.97□□□□□ -0.65
XRCC3-209ENST00000554913 EGFEM1PQ0D2K5 195 aa10.97□□□□□ -0.65
XRCC3-209ENST00000554913 Q5XG85 94 aa10.96□□□□□ -0.65
XRCC3-209ENST00000554913 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.66
XRCC3-209ENST00000554913 C15orf56Q8N910 161 aa10.96□□□□□ -0.66
XRCC3-209ENST00000554913 RMI2Q96E14 147 aa10.96□□□□□ -0.66
XRCC3-209ENST00000554913 PKD1L1Q8TDX9 2849 aa10.95□□□□□ -0.66
XRCC3-209ENST00000554913 KPRPQ5T749 579 aaPredicted RBP10.95□□□□□ -0.66
XRCC3-209ENST00000554913 FBN1P35555 2871 aaKnown RBP10.95□□□□□ -0.66
XRCC3-209ENST00000554913 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
XRCC3-209ENST00000554913 TM2D3Q9BRN9 247 aa10.95□□□□□ -0.66
XRCC3-209ENST00000554913 ANK2Q01484 3957 aa10.93□□□□□ -0.66
XRCC3-209ENST00000554913 RETNQ9HD89 108 aa10.93□□□□□ -0.66
XRCC3-209ENST00000554913 Q6ZRP5 223 aa10.92□□□□□ -0.66
XRCC3-209ENST00000554913 Q8N9L7 120 aa10.91□□□□□ -0.66
XRCC3-209ENST00000554913 STAB1Q9NY15 2570 aa10.91□□□□□ -0.66
XRCC3-209ENST00000554913 HRCT1Q6UXD1 115 aa10.91□□□□□ -0.66
XRCC3-209ENST00000554913 F8WEM9 126 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms