RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 IGLV7-43P04211 117 aa14.26□□□□□ -0.13
NEK9-203ENST00000553945 TSPEAR-AS2P59090 65 aa14.26□□□□□ -0.13
NEK9-203ENST00000553945 NKAPP1Q8N9T2 125 aa14.26□□□□□ -0.13
NEK9-203ENST00000553945 PLEKHB2Q96CS7 222 aa14.26□□□□□ -0.13
NEK9-203ENST00000553945 MYMXA0A1B0GTQ4 84 aa14.25□□□□□ -0.13
NEK9-203ENST00000553945 HERV-K104P63124 156 aa14.25□□□□□ -0.13
NEK9-203ENST00000553945 MEIG1Q5JSS6 88 aa14.25□□□□□ -0.13
NEK9-203ENST00000553945 IGLV5-37A0A075B6J1 123 aa14.24□□□□□ -0.13
NEK9-203ENST00000553945 SMIM13P0DJ93 91 aa14.24□□□□□ -0.13
NEK9-203ENST00000553945 LINC00167Q96N53 147 aa14.24□□□□□ -0.13
NEK9-203ENST00000553945 GAGE10A6NGK3 116 aa14.23□□□□□ -0.13
NEK9-203ENST00000553945 J3QQQ9 107 aa14.23□□□□□ -0.13
NEK9-203ENST00000553945 RPL37AP8A6NKH3 93 aa14.22□□□□□ -0.13
NEK9-203ENST00000553945 REG3GQ6UW15 175 aa14.22□□□□□ -0.13
NEK9-203ENST00000553945 PET117Q6UWS5 81 aa14.22□□□□□ -0.13
NEK9-203ENST00000553945 C3orf79P0CE67 100 aa14.21□□□□□ -0.13
NEK9-203ENST00000553945 LINC01545Q5VT33 79 aa14.21□□□□□ -0.13
NEK9-203ENST00000553945 LGALS3P17931 250 aaKnown RBP14.2□□□□□ -0.14
NEK9-203ENST00000553945 KRTDAPP60985 99 aa14.2□□□□□ -0.14
NEK9-203ENST00000553945 RPL24P83731 157 aaKnown RBP14.2□□□□□ -0.14
NEK9-203ENST00000553945 LINC00587B1AMM8 73 aa14.19□□□□□ -0.14
NEK9-203ENST00000553945 VPREB1P12018 145 aa14.19□□□□□ -0.14
NEK9-203ENST00000553945 DIRC1Q969H9 104 aa14.18□□□□□ -0.14
NEK9-203ENST00000553945 MIR7-3HGQ8N6C7 128 aa14.17□□□□□ -0.14
NEK9-203ENST00000553945 E9PLD3 99 aa14.16□□□□□ -0.14
NEK9-203ENST00000553945 MT1HL1P0DM35 61 aa14.16□□□□□ -0.14
NEK9-203ENST00000553945 NMUP48645 174 aa14.16□□□□□ -0.14
NEK9-203ENST00000553945 Q8NDZ9 215 aa14.16□□□□□ -0.14
NEK9-203ENST00000553945 LINC01600Q96MT4 127 aa14.16□□□□□ -0.14
NEK9-203ENST00000553945 IGKV2-28A0A075B6P5 120 aa14.13□□□□□ -0.15
NEK9-203ENST00000553945 H0Y9J4 135 aa14.13□□□□□ -0.15
NEK9-203ENST00000553945 BCE1O60756 84 aa14.13□□□□□ -0.15
NEK9-203ENST00000553945 IGKV2D-28P01615 120 aa14.13□□□□□ -0.15
NEK9-203ENST00000553945 BOD1L2Q8IYS8 172 aa14.11□□□□□ -0.15
NEK9-203ENST00000553945 TNXBP22105 4242 aa14.1□□□□□ -0.15
NEK9-203ENST00000553945 C20orf202A1L168 122 aa14.1□□□□□ -0.15
NEK9-203ENST00000553945 ZNF861PO60384 105 aa14.1□□□□□ -0.15
NEK9-203ENST00000553945 DAND5Q8N907 189 aa14.1□□□□□ -0.15
NEK9-203ENST00000553945 IGLV1-50A0A075B6I6 118 aa14.09□□□□□ -0.15
NEK9-203ENST00000553945 HIST3H2BBQ8N257 126 aa14.08□□□□□ -0.16
NEK9-203ENST00000553945 S100A2P29034 98 aa14.07□□□□□ -0.16
NEK9-203ENST00000553945 A0A0J9YXY3 114 aa14.06□□□□□ -0.16
NEK9-203ENST00000553945 M0R378 163 aa14.06□□□□□ -0.16
NEK9-203ENST00000553945 NCR3O14931 201 aa14.06□□□□□ -0.16
NEK9-203ENST00000553945 S100A6P06703 90 aa14.06□□□□□ -0.16
NEK9-203ENST00000553945 RPL28P46779 137 aaKnown RBP14.06□□□□□ -0.16
NEK9-203ENST00000553945 IGKV2D-26A0A0A0MRZ7 120 aa14.04□□□□□ -0.16
NEK9-203ENST00000553945 TMEM238C9JI98 176 aa14.04□□□□□ -0.16
NEK9-203ENST00000553945 KRTAP10-8P60410 259 aa14.04□□□□□ -0.16
NEK9-203ENST00000553945 TMEM126AQ9H061 195 aa14.04□□□□□ -0.16
NEK9-203ENST00000553945 UBE2AP49459 152 aa14.03□□□□□ -0.16
NEK9-203ENST00000553945 ATOH7Q8N100 152 aa14.03□□□□□ -0.16
NEK9-203ENST00000553945 HIST1H2BLQ99880 126 aa14.03□□□□□ -0.16
NEK9-203ENST00000553945 MIEN1Q9BRT3 115 aa14.02□□□□□ -0.17
NEK9-203ENST00000553945 ZNF815PA8K554 130 aa14.01□□□□□ -0.17
NEK9-203ENST00000553945 LOC107984156A0A0G2JMH3 177 aa14□□□□□ -0.17
NEK9-203ENST00000553945 ADAMTSL4-AS1Q5T5F5 129 aa14□□□□□ -0.17
NEK9-203ENST00000553945 ARL17AQ8IVW1 177 aa14□□□□□ -0.17
NEK9-203ENST00000553945 TTTY13Q9BZ97 58 aa14□□□□□ -0.17
NEK9-203ENST00000553945 AKR1D1P51857 326 aa13.99□□□□□ -0.17
NEK9-203ENST00000553945 NPC2P61916 151 aa13.99□□□□□ -0.17
NEK9-203ENST00000553945 FAM19A1Q7Z5A9 133 aa13.99□□□□□ -0.17
NEK9-203ENST00000553945 KRTAP1-4P0C5Y4 121 aa13.98□□□□□ -0.17
NEK9-203ENST00000553945 ANKRD39Q53RE8 183 aa13.98□□□□□ -0.17
NEK9-203ENST00000553945 KRTAP13-1Q8IUC0 172 aa13.98□□□□□ -0.17
NEK9-203ENST00000553945 PRR26Q8N8Z3 221 aa13.98□□□□□ -0.17
NEK9-203ENST00000553945 SNRPEP62304 92 aaKnown RBP13.97□□□□□ -0.17
NEK9-203ENST00000553945 PRLHP81277 87 aa13.96□□□□□ -0.17
NEK9-203ENST00000553945 SOSTDC1Q6X4U4 206 aa13.95□□□□□ -0.18
NEK9-203ENST00000553945 TIMM17BO60830 172 aa13.94□□□□□ -0.18
NEK9-203ENST00000553945 LITAFQ99732 161 aa13.94□□□□□ -0.18
NEK9-203ENST00000553945 TRBV10-3A0A0K0K1G6 114 aa13.93□□□□□ -0.18
NEK9-203ENST00000553945 PRYO14603 147 aa13.93□□□□□ -0.18
NEK9-203ENST00000553945 EIF4EBP3O60516 100 aaPredicted RBP13.93□□□□□ -0.18
NEK9-203ENST00000553945 SPANXB1Q9NS25 103 aaPredicted RBP13.93□□□□□ -0.18
NEK9-203ENST00000553945 TRBV10-2A0A0K0K1G8 114 aa13.92□□□□□ -0.18
NEK9-203ENST00000553945 NDUFC2O95298 119 aa13.92□□□□□ -0.18
NEK9-203ENST00000553945 HMCN2Q8NDA2 5059 aa13.91□□□□□ -0.18
NEK9-203ENST00000553945 KCNQ1DNQ9H478 68 aa13.91□□□□□ -0.18
NEK9-203ENST00000553945 DDTP30046 118 aa13.9□□□□□ -0.18
NEK9-203ENST00000553945 S100A12P80511 92 aa13.9□□□□□ -0.18
NEK9-203ENST00000553945 SCGB1D4Q6XE38 83 aa13.9□□□□□ -0.18
NEK9-203ENST00000553945 LINC00308Q8TCZ7 52 aa13.9□□□□□ -0.18
NEK9-203ENST00000553945 C5orf52A6NGY3 159 aa13.89□□□□□ -0.19
NEK9-203ENST00000553945 S100A7L2Q5SY68 101 aa13.87□□□□□ -0.19
NEK9-203ENST00000553945 PCP2Q8IVA1 136 aa13.87□□□□□ -0.19
NEK9-203ENST00000553945 ETDCA0A1B0GVM5 59 aa13.86□□□□□ -0.19
NEK9-203ENST00000553945 SPRR1AP35321 89 aa13.86□□□□□ -0.19
NEK9-203ENST00000553945 RPL13AP40429 203 aaKnown RBP13.86□□□□□ -0.19
NEK9-203ENST00000553945 LINC00337Q8N6G1 96 aa13.86□□□□□ -0.19
NEK9-203ENST00000553945 HIGD2AQ9BW72 106 aa13.86□□□□□ -0.19
NEK9-203ENST00000553945 HSBP1L1C9JCN9 74 aa13.85□□□□□ -0.19
NEK9-203ENST00000553945 SPANXCQ9NY87 97 aa13.84□□□□□ -0.19
NEK9-203ENST00000553945 SCGB1D1O95968 90 aa13.83□□□□□ -0.2
NEK9-203ENST00000553945 ANAPC11Q9NYG5 84 aa13.83□□□□□ -0.2
NEK9-203ENST00000553945 KRTAP4-16G5E9R7 235 aaPredicted RBP13.82□□□□□ -0.2
NEK9-203ENST00000553945 IGLV6-57P01721 117 aa13.82□□□□□ -0.2
NEK9-203ENST00000553945 SPANXDQ9BXN6 97 aa13.82□□□□□ -0.2
NEK9-203ENST00000553945 A0A087X002 238 aa13.81□□□□□ -0.2
NEK9-203ENST00000553945 CRYGAP11844 174 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms