RNA–Protein interactions for RNA: ENST00000553917.5

RALGAPA1-205, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-205	ENST00000553917		F8VRH5	84 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	NDUFC1	O43677	76 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	UBE2D3	P61077	147 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	RPL37	P61927	97 aa	Known RBP	0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	UBE2D2	P62837	147 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	PIGY	Q3MUY2	71 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	C10orf128	Q5T292	105 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	ATP5EP2	Q5VTU8	51 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	C10orf113	Q5VZT2	155 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	COX14	Q96I36	57 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	LINC01600	Q96MT4	127 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	CYP4F30P	Q9H0H9	118 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	PRO1854	Q9UHT4	67 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	EML5	Q05BV3	1969 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	BPTF	Q12830	3046 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	COL14A1	Q05707	1796 aa	Known RBP	0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	ZGRF1	Q86YA3	2104 aa		0.95	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	BTAF1	O14981	1849 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	hADV29S1	A0JD25	119 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	ZNF815P	A8K554	130 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917		D6R8Y8	96 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917		H0YGG7	62 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917		M0R3E3	92 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	BCE1	O60756	84 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	IFI27	P40305	119 aa	Predicted RBP	0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	RPS27	P42677	84 aa	Known RBP	0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	ZNF137P	P52743	207 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	TFF3	Q07654	80 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	SERP2	Q8N6R1	65 aa		0.94	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	HELZ2	Q9BYK8	2649 aa	Known RBP	0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	TRPM7	Q96QT4	1865 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	PLXNA1	Q9UIW2	1896 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	KMT2B	Q9UMN6	2715 aa	Predicted RBP	0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	COL6A6	A6NMZ7	2263 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	TRBV7-3	A0A075B6L6	115 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917		A0A087WTM6	91 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	LINC01546	A6NGU7	62 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	LY6G6C	O95867	125 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	CD52	P31358	61 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	PRCD	Q00LT1	54 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	DEFB121	Q5J5C9	76 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	CNFN	Q9BYD5	112 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	CNTRL	Q7Z7A1	2325 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	CIT	O14578	2027 aa		0.93	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	TNS1	Q9HBL0	1735 aa	Known RBP	0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	CLPSL1	A2RUU4	121 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	IQCF6	A8MYZ5	107 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	NDUFA3	O95167	84 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	STATH	P02808	62 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	ARMS2	P0C7Q2	107 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917		Q6JHZ5	121 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	FAM167A-AS1	Q96KT0	104 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	DPH3P1	Q9H4G8	78 aa		0.92	□□□□□ -2.26
RALGAPA1-205	ENST00000553917		H0YGX0	51 aa		0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	MRPL33	O75394	65 aa	Known RBP	0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	SFTA2	Q6UW10	78 aa		0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	TMEM263	Q8WUH6	116 aa	Known RBP	0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	SMIM2	Q9BVW6	85 aa		0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	UBL5	Q9BZL1	73 aa		0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	BPESC1	Q9GZL8	116 aa		0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	LENEP	Q9Y5L5	61 aa		0.91	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	UBR3	Q6ZT12	1888 aa		0.9	□□□□□ -2.26
RALGAPA1-205	ENST00000553917	NDUFB1	O75438	58 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	COX6B1	P14854	86 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	DEFB110	Q30KQ9	67 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	TMEM167A	Q8TBQ9	72 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917		Q96NJ1	140 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	NDUFA4L2	Q9NRX3	87 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	SRCAP	Q6ZRS2	3230 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	ABCA4	P78363	2273 aa		0.9	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	ROS1	P08922	2347 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	PLXNA2	O75051	1894 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	PAPPA2	Q9BXP8	1791 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	TRAV21	A0A0B4J279	112 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	DEFB108A	A8MXU0	73 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	NDUFA1	O15239	70 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	MGP	P08493	103 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	SAA2	P0DJI9	122 aa	Predicted RBP	0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	ACYP2	P14621	99 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	RPL39P5	Q59GN2	51 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	VMO1	Q7Z5L0	202 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	MUSTN1	Q8IVN3	82 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	SMIM11B	Q8TCY0	68 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	UBE2D4	Q9Y2X8	147 aa		0.89	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	COL4A6	Q14031	1691 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	KIAA0100	Q14667	2235 aa	Known RBP	0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	PLXNB2	O15031	1838 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	TRGV1	A0A0A0MS02	117 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	IGIP	A6NJ69	53 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917		F8WEM9	126 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917		H7BZZ5	65 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917		I3L3M4	83 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917		M0R1W7	72 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	CRIP1	P50238	77 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	WT1-AS	Q06250	92 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	PRR15L	Q9BU68	103 aa		0.88	□□□□□ -2.27
RALGAPA1-205	ENST00000553917	SPTB	P11277	2137 aa		0.88	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms