RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 IGKV2-28A0A075B6P5 120 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 HIGD1CA8MV81 97 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 E9PLD3 99 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 SCO1O75880 301 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 IGKV2D-28P01615 120 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 TAL2Q16559 108 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 FAM19A1Q7Z5A9 133 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 NKAPP1Q8N9T2 125 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 Q8NBF4 154 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 PLEKHB2Q96CS7 222 aa2.96□□□□□ -1.94
HOXB3-213ENST00000552000 PCOTHQ58A44 107 aa2.95□□□□□ -1.94
HOXB3-213ENST00000552000 ZC2HC1BQ5TFG8 222 aa2.95□□□□□ -1.94
HOXB3-213ENST00000552000 Q6ZN92 141 aa2.95□□□□□ -1.94
HOXB3-213ENST00000552000 FAM231DQ6ZW35 169 aa2.95□□□□□ -1.94
HOXB3-213ENST00000552000 Q8IZM0 81 aa2.95□□□□□ -1.94
HOXB3-213ENST00000552000 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
HOXB3-213ENST00000552000 NDUFA12Q9UI09 145 aa2.95□□□□□ -1.94
HOXB3-213ENST00000552000 IGLV8-61A0A075B6I0 122 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 IGLV4-3A0A075B6K6 122 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 KANTRA0A1W2PQU2 76 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 SMIM1B2RUZ4 78 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 TMEM238C9JI98 176 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 TCAPO15273 167 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 IFI27P40305 119 aaPredicted RBP2.94□□□□□ -1.94
HOXB3-213ENST00000552000 MRPL51Q4U2R6 128 aaKnown RBP2.94□□□□□ -1.94
HOXB3-213ENST00000552000 CBLN2Q8IUK8 224 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 C20orf78Q9BR46 151 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 SMIM2Q9BVW6 85 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 HIGD2AQ9BW72 106 aa2.94□□□□□ -1.94
HOXB3-213ENST00000552000 F8VRH5 84 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 SPINK1P00995 79 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 CKS2P33552 79 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 ZNF345Q14585 488 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 FAM104BQ5XKR9 115 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 TEX43Q6ZNM6 134 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 TMEM141Q96I45 108 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 TMEM126AQ9H061 195 aa2.93□□□□□ -1.94
HOXB3-213ENST00000552000 TRBV24-1A0A075B6N3 115 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 NPYP01303 97 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 CEBPGP53567 150 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 RAB5BP61020 215 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 COX19Q49B96 90 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 FAM19A2Q8N3H0 131 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 SPRR4Q96PI1 79 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 C2orf88Q9BSF0 95 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 GNB1LQ9BYB4 327 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
HOXB3-213ENST00000552000 PYGO1Q9Y3Y4 419 aa2.92□□□□□ -1.94
HOXB3-213ENST00000552000 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
HOXB3-213ENST00000552000 LINC00862A6NCI5 91 aa2.91□□□□□ -1.94
HOXB3-213ENST00000552000 D6R8Y8 96 aa2.91□□□□□ -1.94
HOXB3-213ENST00000552000 M0R378 163 aa2.91□□□□□ -1.94
HOXB3-213ENST00000552000 RAB5AP20339 215 aa2.91□□□□□ -1.94
HOXB3-213ENST00000552000 CXCL5P42830 114 aa2.91□□□□□ -1.94
HOXB3-213ENST00000552000 NDUFV3P56181 108 aaKnown RBP2.91□□□□□ -1.94
HOXB3-213ENST00000552000 Q8N377 158 aa2.91□□□□□ -1.94
HOXB3-213ENST00000552000 CDKN2A-AS1Q9UH64 79 aa2.91□□□□□ -1.94
HOXB3-213ENST00000552000 HMSDA8MTL9 139 aa2.9□□□□□ -1.95
HOXB3-213ENST00000552000 TMEM250H0YL14 139 aa2.9□□□□□ -1.95
HOXB3-213ENST00000552000 SLC25A20O43772 301 aa2.9□□□□□ -1.95
HOXB3-213ENST00000552000 C2orf66Q6UXQ4 117 aa2.9□□□□□ -1.95
HOXB3-213ENST00000552000 AMELXQ99217 191 aa2.9□□□□□ -1.95
HOXB3-213ENST00000552000 OSTCQ9NRP0 149 aa2.9□□□□□ -1.95
HOXB3-213ENST00000552000 ZNF706Q9Y5V0 76 aaPredicted RBP2.9□□□□□ -1.95
HOXB3-213ENST00000552000 A6NDN8 102 aa2.89□□□□□ -1.95
HOXB3-213ENST00000552000 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
HOXB3-213ENST00000552000 HERVK_113P63121 156 aa2.89□□□□□ -1.95
HOXB3-213ENST00000552000 LINC01551Q86U37 167 aa2.89□□□□□ -1.95
HOXB3-213ENST00000552000 COX7B2Q8TF08 81 aa2.89□□□□□ -1.95
HOXB3-213ENST00000552000 SMIM7Q9BQ49 75 aa2.89□□□□□ -1.95
HOXB3-213ENST00000552000 BATF3Q9NR55 127 aa2.89□□□□□ -1.95
HOXB3-213ENST00000552000 V9GYV3 84 aa2.89□□□□□ -1.95
HOXB3-213ENST00000552000 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
HOXB3-213ENST00000552000 LOC389332A0A1B0GUA5 103 aa2.88□□□□□ -1.95
HOXB3-213ENST00000552000 C9orf92A6NGG3 77 aa2.88□□□□□ -1.95
HOXB3-213ENST00000552000 RPS29P62273 56 aaKnown RBP2.88□□□□□ -1.95
HOXB3-213ENST00000552000 MOBPQ13875 183 aa2.88□□□□□ -1.95
HOXB3-213ENST00000552000 FAM19A3Q7Z5A8 133 aa2.88□□□□□ -1.95
HOXB3-213ENST00000552000 OCR1Q9BZK8 76 aa2.88□□□□□ -1.95
HOXB3-213ENST00000552000 NAT8BQ9UHF3 227 aa2.88□□□□□ -1.95
HOXB3-213ENST00000552000 CYSLTR1Q9Y271 337 aa2.88□□□□□ -1.95
HOXB3-213ENST00000552000 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 PPBPP02775 128 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 PFN2P35080 140 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 RAB14P61106 215 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 SEC11AP67812 179 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 CD164Q04900 197 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 PDZD11Q5EBL8 140 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 MRPL54Q6P161 138 aaKnown RBP2.87□□□□□ -1.95
HOXB3-213ENST00000552000 TMEM136Q6ZRR5 245 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 Q8NDZ9 215 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 SMCR5Q8TEV8 140 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 PRELID3AQ96N28 172 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 HIST1H4GQ99525 98 aa2.87□□□□□ -1.95
HOXB3-213ENST00000552000 IGIPA6NJ69 53 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 F8W036 122 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 SPINK8P0C7L1 97 aa2.86□□□□□ -1.95
HOXB3-213ENST00000552000 ADAMTSL4-AS1Q5T5F5 129 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms